RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 NHLRC3Q5JS37 347 aa16.21■□□□□ 0.19
PSEN1-207ENST00000553599 EMG1Q92979 244 aaKnown RBP16.21■□□□□ 0.19
PSEN1-207ENST00000553599 SLC25A46Q96AG3 418 aa16.21■□□□□ 0.19
PSEN1-207ENST00000553599 C1orf147Q96MC9 270 aaPredicted RBP16.21■□□□□ 0.19
PSEN1-207ENST00000553599 ZNF488Q96MN9 340 aa16.21■□□□□ 0.19
PSEN1-207ENST00000553599 BPESC1Q9GZL8 116 aa16.21■□□□□ 0.19
PSEN1-207ENST00000553599 WDR13Q9H1Z4 485 aa16.21■□□□□ 0.19
PSEN1-207ENST00000553599 DCSTAMPQ9H295 470 aa16.21■□□□□ 0.19
PSEN1-207ENST00000553599 TMEM165Q9HC07 324 aa16.21■□□□□ 0.19
PSEN1-207ENST00000553599 HMG20AQ9NP66 347 aa16.21■□□□□ 0.19
PSEN1-207ENST00000553599 NLKQ9UBE8 527 aa16.21■□□□□ 0.19
PSEN1-207ENST00000553599 FBLN5Q9UBX5 448 aa16.21■□□□□ 0.19
PSEN1-207ENST00000553599 RSL24D1Q9UHA3 163 aaKnown RBP16.21■□□□□ 0.19
PSEN1-207ENST00000553599 CCDC160A6NGH7 325 aa16.2■□□□□ 0.18
PSEN1-207ENST00000553599 C3orf80F5H4A9 247 aa16.2■□□□□ 0.18
PSEN1-207ENST00000553599 H3BMQ9 156 aa16.2■□□□□ 0.18
PSEN1-207ENST00000553599 WNT9BO14905 357 aa16.2■□□□□ 0.18
PSEN1-207ENST00000553599 CLEC2LP0C7M8 214 aa16.2■□□□□ 0.18
PSEN1-207ENST00000553599 GTF2F2P13984 249 aa16.2■□□□□ 0.18
PSEN1-207ENST00000553599 CD80P33681 288 aa16.2■□□□□ 0.18
PSEN1-207ENST00000553599 SLC22A6Q4U2R8 563 aa16.2■□□□□ 0.18
PSEN1-207ENST00000553599 ATPAF1Q5TC12 328 aaPredicted RBP16.2■□□□□ 0.18
PSEN1-207ENST00000553599 DCDC5Q6ZRR9 648 aa16.2■□□□□ 0.18
PSEN1-207ENST00000553599 OR2W3Q7Z3T1 314 aa16.2■□□□□ 0.18
PSEN1-207ENST00000553599 KRTAP1-3Q8IUG1 177 aa16.2■□□□□ 0.18
PSEN1-207ENST00000553599 OR51T1Q8NGJ9 327 aa16.2■□□□□ 0.18
PSEN1-207ENST00000553599 KCNG3Q8TAE7 436 aa16.2■□□□□ 0.18
PSEN1-207ENST00000553599 FAM3DQ96BQ1 224 aa16.2■□□□□ 0.18
PSEN1-207ENST00000553599 NKX3-1Q99801 234 aaPredicted RBP16.2■□□□□ 0.18
PSEN1-207ENST00000553599 RBFOX1Q9NWB1 397 aaKnown RBP16.2■□□□□ 0.18
PSEN1-207ENST00000553599 GLS2Q9UI32 602 aa16.2■□□□□ 0.18
PSEN1-207ENST00000553599 SETXQ7Z333 2677 aaKnown RBP16.19■□□□□ 0.18
PSEN1-207ENST00000553599 IGHV4-30-2A0A087WSY4 118 aa16.19■□□□□ 0.18
PSEN1-207ENST00000553599 ISPDA4D126 451 aa16.19■□□□□ 0.18
PSEN1-207ENST00000553599 OR2AT4A6NND4 320 aa16.19■□□□□ 0.18
PSEN1-207ENST00000553599 F8VVB4 439 aa16.19■□□□□ 0.18
PSEN1-207ENST00000553599 F8VWA3 439 aa16.19■□□□□ 0.18
PSEN1-207ENST00000553599 HTR3BO95264 441 aa16.19■□□□□ 0.18
PSEN1-207ENST00000553599 PRKACAP17612 351 aa16.19■□□□□ 0.18
PSEN1-207ENST00000553599 ZNF146Q15072 292 aa16.19■□□□□ 0.18
PSEN1-207ENST00000553599 FAM201AQ5SY85 155 aa16.19■□□□□ 0.18
PSEN1-207ENST00000553599 HES5Q5TA89 166 aa16.19■□□□□ 0.18
PSEN1-207ENST00000553599 SFRP4Q6FHJ7 346 aaPredicted RBP16.19■□□□□ 0.18
PSEN1-207ENST00000553599 LINC00596Q86U02 117 aa16.19■□□□□ 0.18
PSEN1-207ENST00000553599 OSR2Q8N2R0 312 aa16.19■□□□□ 0.18
PSEN1-207ENST00000553599 BATF3Q9NR55 127 aa16.19■□□□□ 0.18
PSEN1-207ENST00000553599 CCDC168Q8NDH2 2452 aa16.19■□□□□ 0.18
PSEN1-207ENST00000553599 DPPA5A6NC42 116 aa16.18■□□□□ 0.18
PSEN1-207ENST00000553599 H3BUI4 141 aa16.18■□□□□ 0.18
PSEN1-207ENST00000553599 CALCBP10092 127 aa16.18■□□□□ 0.18
PSEN1-207ENST00000553599 SERPINA2P20848 420 aa16.18■□□□□ 0.18
PSEN1-207ENST00000553599 RORCP51449 518 aa16.18■□□□□ 0.18
PSEN1-207ENST00000553599 GMFBP60983 142 aa16.18■□□□□ 0.18
PSEN1-207ENST00000553599 IL13RA2Q14627 380 aa16.18■□□□□ 0.18
PSEN1-207ENST00000553599 P2RY14Q15391 338 aa16.18■□□□□ 0.18
PSEN1-207ENST00000553599 FAM189A2Q15884 450 aa16.18■□□□□ 0.18
PSEN1-207ENST00000553599 AVPI1Q5T686 147 aa16.18■□□□□ 0.18
PSEN1-207ENST00000553599 STUMQ69YW2 141 aa16.18■□□□□ 0.18
PSEN1-207ENST00000553599 DEFB108BQ8NET1 73 aa16.18■□□□□ 0.18
PSEN1-207ENST00000553599 ANGPTL6Q8NI99 470 aa16.18■□□□□ 0.18
PSEN1-207ENST00000553599 NDNFQ8TB73 568 aa16.18■□□□□ 0.18
PSEN1-207ENST00000553599 PTX4Q96A99 478 aa16.18■□□□□ 0.18
PSEN1-207ENST00000553599 KCTD12Q96CX2 325 aaKnown RBP16.18■□□□□ 0.18
PSEN1-207ENST00000553599 DGCR14Q96DF8 476 aaKnown RBP16.18■□□□□ 0.18
PSEN1-207ENST00000553599 TMEM246Q9BRR3 403 aa16.18■□□□□ 0.18
PSEN1-207ENST00000553599 LIN7BQ9HAP6 207 aa16.18■□□□□ 0.18
PSEN1-207ENST00000553599 ABRACLQ9P1F3 81 aa16.18■□□□□ 0.18
PSEN1-207ENST00000553599 KAAG1Q9UBP8 84 aa16.18■□□□□ 0.18
PSEN1-207ENST00000553599 MIOXQ9UGB7 285 aa16.18■□□□□ 0.18
PSEN1-207ENST00000553599 DAPK2Q9UIK4 370 aa16.18■□□□□ 0.18
PSEN1-207ENST00000553599 PRRC2AP48634 2157 aaKnown RBP16.17■□□□□ 0.18
PSEN1-207ENST00000553599 SMIM30A4D0T7 59 aa16.17■□□□□ 0.18
PSEN1-207ENST00000553599 FAM90A10PA6NDY2 464 aa16.17■□□□□ 0.18
PSEN1-207ENST00000553599 FAM90A18PA6NE21 464 aa16.17■□□□□ 0.18
PSEN1-207ENST00000553599 FAM90A16PA6NEW6 464 aa16.17■□□□□ 0.18
PSEN1-207ENST00000553599 FAM90A20PA6NIJ5 464 aa16.17■□□□□ 0.18
PSEN1-207ENST00000553599 NKX6-3A6NJ46 265 aa16.17■□□□□ 0.18
PSEN1-207ENST00000553599 FAM90A8PA6NJQ4 464 aa16.17■□□□□ 0.18
PSEN1-207ENST00000553599 FAM90A7PA6NKC0 464 aa16.17■□□□□ 0.18
PSEN1-207ENST00000553599 FAM90A22PA8MWA6 464 aa16.17■□□□□ 0.18
PSEN1-207ENST00000553599 TMEM14DPA8MWL7 114 aa16.17■□□□□ 0.18
PSEN1-207ENST00000553599 FAM90A12PA8MX19 464 aa16.17■□□□□ 0.18
PSEN1-207ENST00000553599 FAM90A5PA8MXJ8 464 aa16.17■□□□□ 0.18
PSEN1-207ENST00000553599 FAM90A23PA8MXZ1 464 aa16.17■□□□□ 0.18
PSEN1-207ENST00000553599 TNFRSF13BO14836 293 aaPredicted RBP16.17■□□□□ 0.18
PSEN1-207ENST00000553599 CRTAPO75718 401 aaPredicted RBP16.17■□□□□ 0.18
PSEN1-207ENST00000553599 ZNF205O95201 554 aa16.17■□□□□ 0.18
PSEN1-207ENST00000553599 HEXAP06865 529 aa16.17■□□□□ 0.18
PSEN1-207ENST00000553599 FAM90A15PP0C7V4 464 aa16.17■□□□□ 0.18
PSEN1-207ENST00000553599 FAM90A13PP0C7W8 464 aa16.17■□□□□ 0.18
PSEN1-207ENST00000553599 FAM90A14PP0C7W9 464 aa16.17■□□□□ 0.18
PSEN1-207ENST00000553599 FAM90A24PP0C7X0 464 aa16.17■□□□□ 0.18
PSEN1-207ENST00000553599 VSIG8P0DPA2 414 aa16.17■□□□□ 0.18
PSEN1-207ENST00000553599 PSG2P11465 335 aa16.17■□□□□ 0.18
PSEN1-207ENST00000553599 MGMTP16455 207 aa16.17■□□□□ 0.18
PSEN1-207ENST00000553599 CAV3P56539 151 aa16.17■□□□□ 0.18
PSEN1-207ENST00000553599 QRFPP83859 136 aa16.17■□□□□ 0.18
PSEN1-207ENST00000553599 HNRNPA0Q13151 305 aaKnown RBP16.17■□□□□ 0.18
PSEN1-207ENST00000553599 DYNC1I2Q13409 638 aaKnown RBP16.17■□□□□ 0.18
PSEN1-207ENST00000553599 SPCS2Q15005 226 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms