RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 SLC34A1Q06495 639 aa8.03□□□□□ -1.12
ACTN1-208ENST00000553370 HABP2Q14520 560 aaPredicted RBP8.03□□□□□ -1.12
ACTN1-208ENST00000553370 ZNF273Q14593 569 aa8.03□□□□□ -1.12
ACTN1-208ENST00000553370 SSX2Q16385 188 aa8.03□□□□□ -1.12
ACTN1-208ENST00000553370 TMEM200BQ69YZ2 307 aa8.03□□□□□ -1.12
ACTN1-208ENST00000553370 HCP5Q6MZN7 132 aa8.03□□□□□ -1.12
ACTN1-208ENST00000553370 DEGS2Q6QHC5 323 aa8.03□□□□□ -1.12
ACTN1-208ENST00000553370 TRPM8Q7Z2W7 1104 aa8.03□□□□□ -1.12
ACTN1-208ENST00000553370 LHFPL4Q7Z7J7 247 aa8.03□□□□□ -1.12
ACTN1-208ENST00000553370 TRAPPC6BQ86SZ2 158 aa8.03□□□□□ -1.12
ACTN1-208ENST00000553370 SPATA24Q86W54 205 aa8.03□□□□□ -1.12
ACTN1-208ENST00000553370 NDUFA11Q86Y39 141 aa8.03□□□□□ -1.12
ACTN1-208ENST00000553370 ZNF679Q8IYX0 411 aa8.03□□□□□ -1.12
ACTN1-208ENST00000553370 MFSD4AQ8N468 514 aa8.03□□□□□ -1.12
ACTN1-208ENST00000553370 CD177Q8N6Q3 437 aa8.03□□□□□ -1.12
ACTN1-208ENST00000553370 CFHR4Q92496 578 aa8.03□□□□□ -1.12
ACTN1-208ENST00000553370 ITFG2Q969R8 447 aa8.03□□□□□ -1.12
ACTN1-208ENST00000553370 ASB9Q96DX5 294 aa8.03□□□□□ -1.12
ACTN1-208ENST00000553370 TEAD3Q99594 435 aa8.03□□□□□ -1.12
ACTN1-208ENST00000553370 NECAP2Q9NVZ3 263 aa8.03□□□□□ -1.12
ACTN1-208ENST00000553370 FAM206AQ9NX38 181 aa8.03□□□□□ -1.12
ACTN1-208ENST00000553370 NUFIP1Q9UHK0 495 aaKnown RBP8.03□□□□□ -1.12
ACTN1-208ENST00000553370 SLC22A13Q9Y226 551 aa8.03□□□□□ -1.12
ACTN1-208ENST00000553370 TCF19Q9Y242 345 aa8.03□□□□□ -1.12
ACTN1-208ENST00000553370 NBEAL2Q6ZNJ1 2754 aa8.03□□□□□ -1.12
ACTN1-208ENST00000553370 ZNF670-ZNF695F2Z2N8 137 aa8.02□□□□□ -1.13
ACTN1-208ENST00000553370 CLIC3O95833 236 aa8.02□□□□□ -1.13
ACTN1-208ENST00000553370 CYB5AP00167 134 aa8.02□□□□□ -1.13
ACTN1-208ENST00000553370 TK1P04183 234 aa8.02□□□□□ -1.13
ACTN1-208ENST00000553370 OCM2P0CE71 109 aa8.02□□□□□ -1.13
ACTN1-208ENST00000553370 OCMP0CE72 109 aaPredicted RBP8.02□□□□□ -1.13
ACTN1-208ENST00000553370 HOXB6P17509 224 aaKnown RBP8.02□□□□□ -1.13
ACTN1-208ENST00000553370 CALB2P22676 271 aa8.02□□□□□ -1.13
ACTN1-208ENST00000553370 LORP23490 312 aaPredicted RBP8.02□□□□□ -1.13
ACTN1-208ENST00000553370 RAB13P51153 203 aa8.02□□□□□ -1.13
ACTN1-208ENST00000553370 LOXL3P58215 753 aa8.02□□□□□ -1.13
ACTN1-208ENST00000553370 COL10A1Q03692 680 aa8.02□□□□□ -1.13
ACTN1-208ENST00000553370 MFGE8Q08431 387 aaPredicted RBP8.02□□□□□ -1.13
ACTN1-208ENST00000553370 ODF4Q2M2E3 257 aa8.02□□□□□ -1.13
ACTN1-208ENST00000553370 TMEM236Q5W0B7 351 aa8.02□□□□□ -1.13
ACTN1-208ENST00000553370 ZNF322Q6U7Q0 402 aaPredicted RBP8.02□□□□□ -1.13
ACTN1-208ENST00000553370 Q6ZPA2 131 aa8.02□□□□□ -1.13
ACTN1-208ENST00000553370 ZNF676Q8N7Q3 588 aa8.02□□□□□ -1.13
ACTN1-208ENST00000553370 ZNF714Q96N38 554 aa8.02□□□□□ -1.13
ACTN1-208ENST00000553370 OR8B4Q96RC9 309 aa8.02□□□□□ -1.13
ACTN1-208ENST00000553370 ADI1Q9BV57 179 aa8.02□□□□□ -1.13
ACTN1-208ENST00000553370 MMP28Q9H239 520 aa8.02□□□□□ -1.13
ACTN1-208ENST00000553370 ZNF702PQ9H963 129 aa8.02□□□□□ -1.13
ACTN1-208ENST00000553370 PAPOLBQ9NRJ5 636 aaKnown RBP8.02□□□□□ -1.13
ACTN1-208ENST00000553370 GLS2Q9UI32 602 aa8.02□□□□□ -1.13
ACTN1-208ENST00000553370 HILPDAQ9Y5L2 63 aa8.02□□□□□ -1.13
ACTN1-208ENST00000553370 hADV38S2A0JD32 116 aa8.01□□□□□ -1.13
ACTN1-208ENST00000553370 A6NIN4 97 aa8.01□□□□□ -1.13
ACTN1-208ENST00000553370 H3BSH0 61 aa8.01□□□□□ -1.13
ACTN1-208ENST00000553370 DLGAP1O14490 977 aa8.01□□□□□ -1.13
ACTN1-208ENST00000553370 GATBO75879 557 aaKnown RBP8.01□□□□□ -1.13
ACTN1-208ENST00000553370 RPP14O95059 124 aaKnown RBP8.01□□□□□ -1.13
ACTN1-208ENST00000553370 FAM107AO95990 144 aa8.01□□□□□ -1.13
ACTN1-208ENST00000553370 KRT8P05787 483 aa8.01□□□□□ -1.13
ACTN1-208ENST00000553370 CHRM2P08172 466 aa8.01□□□□□ -1.13
ACTN1-208ENST00000553370 ZNF728P0DKX0 622 aa8.01□□□□□ -1.13
ACTN1-208ENST00000553370 SLC2A5P22732 501 aa8.01□□□□□ -1.13
ACTN1-208ENST00000553370 GABRR1P24046 479 aa8.01□□□□□ -1.13
ACTN1-208ENST00000553370 CXCR4P61073 352 aa8.01□□□□□ -1.13
ACTN1-208ENST00000553370 MS4A2Q01362 244 aa8.01□□□□□ -1.13
ACTN1-208ENST00000553370 IL18R1Q13478 541 aa8.01□□□□□ -1.13
ACTN1-208ENST00000553370 FLOT2Q14254 428 aa8.01□□□□□ -1.13
ACTN1-208ENST00000553370 TMEM177Q53S58 311 aa8.01□□□□□ -1.13
ACTN1-208ENST00000553370 KPRPQ5T749 579 aaPredicted RBP8.01□□□□□ -1.13
ACTN1-208ENST00000553370 SLX4IPQ5VYV7 408 aa8.01□□□□□ -1.13
ACTN1-208ENST00000553370 CALHM1Q8IU99 346 aa8.01□□□□□ -1.13
ACTN1-208ENST00000553370 SLC35F2Q8IXU6 374 aa8.01□□□□□ -1.13
ACTN1-208ENST00000553370 ADGRG5Q8IZF4 528 aa8.01□□□□□ -1.13
ACTN1-208ENST00000553370 HS3ST5Q8IZT8 346 aa8.01□□□□□ -1.13
ACTN1-208ENST00000553370 YIPF7Q8N8F6 280 aa8.01□□□□□ -1.13
ACTN1-208ENST00000553370 DNAJC9Q8WXX5 260 aa8.01□□□□□ -1.13
ACTN1-208ENST00000553370 EMG1Q92979 244 aaKnown RBP8.01□□□□□ -1.13
ACTN1-208ENST00000553370 PHF21AQ96BD5 680 aa8.01□□□□□ -1.13
ACTN1-208ENST00000553370 MALSU1Q96EH3 234 aa8.01□□□□□ -1.13
ACTN1-208ENST00000553370 AKR1E2Q96JD6 320 aa8.01□□□□□ -1.13
ACTN1-208ENST00000553370 CEP19Q96LK0 163 aa8.01□□□□□ -1.13
ACTN1-208ENST00000553370 CITED2Q99967 270 aaPredicted RBP8.01□□□□□ -1.13
ACTN1-208ENST00000553370 NRIP2Q9BQI9 281 aa8.01□□□□□ -1.13
ACTN1-208ENST00000553370 THTPAQ9BU02 230 aa8.01□□□□□ -1.13
ACTN1-208ENST00000553370 CDCA4Q9BXL8 241 aa8.01□□□□□ -1.13
ACTN1-208ENST00000553370 SLC25A19Q9HC21 320 aa8.01□□□□□ -1.13
ACTN1-208ENST00000553370 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.01□□□□□ -1.13
ACTN1-208ENST00000553370 KRT84Q9NSB2 600 aa8.01□□□□□ -1.13
ACTN1-208ENST00000553370 OR52A1Q9UKL2 312 aa8.01□□□□□ -1.13
ACTN1-208ENST00000553370 SNX5Q9Y5X3 404 aa8.01□□□□□ -1.13
ACTN1-208ENST00000553370 R4GMQ9 66 aa8.01□□□□□ -1.13
ACTN1-208ENST00000553370 PQLC2LA1A4F0 135 aa8□□□□□ -1.13
ACTN1-208ENST00000553370 AQP12BA6NM10 295 aa8□□□□□ -1.13
ACTN1-208ENST00000553370 VGLL3A8MV65 326 aa8□□□□□ -1.13
ACTN1-208ENST00000553370 K7N7A8 449 aa8□□□□□ -1.13
ACTN1-208ENST00000553370 SYT7O43581 403 aa8□□□□□ -1.13
ACTN1-208ENST00000553370 MPIG6BO95866 241 aa8□□□□□ -1.13
ACTN1-208ENST00000553370 SERPINA3P01011 423 aa8□□□□□ -1.13
ACTN1-208ENST00000553370 RBP4P02753 201 aa8□□□□□ -1.13
ACTN1-208ENST00000553370 TTRP02766 147 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms