RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 NHLRC4P0CG21 123 aaPredicted RBP7.21□□□□□ -1.26
SYNE2-209ENST00000553308 SLC2A5P22732 501 aa7.21□□□□□ -1.26
SYNE2-209ENST00000553308 LMO1P25800 156 aa7.21□□□□□ -1.26
SYNE2-209ENST00000553308 RPS7P62081 194 aaKnown RBP7.21□□□□□ -1.26
SYNE2-209ENST00000553308 ESRRGP62508 458 aa7.21□□□□□ -1.26
SYNE2-209ENST00000553308 RPL23AP62750 156 aaKnown RBP7.21□□□□□ -1.26
SYNE2-209ENST00000553308 DGCR2P98153 550 aa7.21□□□□□ -1.26
SYNE2-209ENST00000553308 MEF2CQ06413 473 aaPredicted RBP7.21□□□□□ -1.26
SYNE2-209ENST00000553308 IL24Q13007 206 aa7.21□□□□□ -1.26
SYNE2-209ENST00000553308 IL18R1Q13478 541 aa7.21□□□□□ -1.26
SYNE2-209ENST00000553308 C9orf152Q5JTZ5 239 aa7.21□□□□□ -1.26
SYNE2-209ENST00000553308 CLVS2Q5SYC1 327 aa7.21□□□□□ -1.26
SYNE2-209ENST00000553308 LCN1P1Q5VSP4 162 aa7.21□□□□□ -1.26
SYNE2-209ENST00000553308 OR2T5Q6IEZ7 315 aa7.21□□□□□ -1.26
SYNE2-209ENST00000553308 CD300LDQ6UXZ3 194 aa7.21□□□□□ -1.26
SYNE2-209ENST00000553308 C8orf86Q6ZUL3 223 aa7.21□□□□□ -1.26
SYNE2-209ENST00000553308 ZNF329Q86UD4 541 aa7.21□□□□□ -1.26
SYNE2-209ENST00000553308 OR2T29Q8NH02 315 aa7.21□□□□□ -1.26
SYNE2-209ENST00000553308 TFAP2CQ92754 450 aa7.21□□□□□ -1.26
SYNE2-209ENST00000553308 ITFG2Q969R8 447 aa7.21□□□□□ -1.26
SYNE2-209ENST00000553308 RBM14Q96PK6 669 aaKnown RBP7.21□□□□□ -1.26
SYNE2-209ENST00000553308 FEVQ99581 238 aa7.21□□□□□ -1.26
SYNE2-209ENST00000553308 MCRIP2Q9BUT9 160 aaKnown RBP7.21□□□□□ -1.26
SYNE2-209ENST00000553308 CHST6Q9GZX3 395 aa7.21□□□□□ -1.26
SYNE2-209ENST00000553308 IL36RNQ9UBH0 155 aa7.21□□□□□ -1.26
SYNE2-209ENST00000553308 GTF2A1LQ9UNN4 478 aa7.21□□□□□ -1.26
SYNE2-209ENST00000553308 COPS3Q9UNS2 423 aa7.21□□□□□ -1.26
SYNE2-209ENST00000553308 LINC00312Q9Y6C7 94 aa7.21□□□□□ -1.26
SYNE2-209ENST00000553308 TCRBV5S2A0A599 114 aa7.2□□□□□ -1.26
SYNE2-209ENST00000553308 NUDT19A8MXV4 375 aa7.2□□□□□ -1.26
SYNE2-209ENST00000553308 C3orf84H3BNL1 204 aa7.2□□□□□ -1.26
SYNE2-209ENST00000553308 DLGAP1O14490 977 aa7.2□□□□□ -1.26
SYNE2-209ENST00000553308 SRSF10O75494 262 aaKnown RBP7.2□□□□□ -1.26
SYNE2-209ENST00000553308 INMTO95050 263 aa7.2□□□□□ -1.26
SYNE2-209ENST00000553308 BRS3P32247 399 aa7.2□□□□□ -1.26
SYNE2-209ENST00000553308 APOFQ13790 326 aa7.2□□□□□ -1.26
SYNE2-209ENST00000553308 GINS1Q14691 196 aa7.2□□□□□ -1.26
SYNE2-209ENST00000553308 GRK1Q15835 563 aa7.2□□□□□ -1.26
SYNE2-209ENST00000553308 ZNF829Q3KNS6 432 aaPredicted RBP7.2□□□□□ -1.26
SYNE2-209ENST00000553308 SLC35D3Q5M8T2 416 aa7.2□□□□□ -1.26
SYNE2-209ENST00000553308 PRAMEF5Q5TYX0 476 aa7.2□□□□□ -1.26
SYNE2-209ENST00000553308 KCTD18Q6PI47 426 aaPredicted RBP7.2□□□□□ -1.26
SYNE2-209ENST00000553308 DEGS2Q6QHC5 323 aa7.2□□□□□ -1.26
SYNE2-209ENST00000553308 OR2W3Q7Z3T1 314 aa7.2□□□□□ -1.26
SYNE2-209ENST00000553308 PIGWQ7Z7B1 504 aa7.2□□□□□ -1.26
SYNE2-209ENST00000553308 OR52N4Q8NGI2 321 aa7.2□□□□□ -1.26
SYNE2-209ENST00000553308 OR14K1Q8NGZ2 314 aa7.2□□□□□ -1.26
SYNE2-209ENST00000553308 STMN2Q93045 179 aa7.2□□□□□ -1.26
SYNE2-209ENST00000553308 SLAMF9Q96A28 289 aa7.2□□□□□ -1.26
SYNE2-209ENST00000553308 SNX22Q96L94 193 aa7.2□□□□□ -1.26
SYNE2-209ENST00000553308 CEP19Q96LK0 163 aa7.2□□□□□ -1.26
SYNE2-209ENST00000553308 DUX3Q96PT4 197 aa7.2□□□□□ -1.26
SYNE2-209ENST00000553308 PRR25Q96S07 402 aa7.2□□□□□ -1.26
SYNE2-209ENST00000553308 P2RX4Q99571 388 aa7.2□□□□□ -1.26
SYNE2-209ENST00000553308 ASCL2Q99929 193 aa7.2□□□□□ -1.26
SYNE2-209ENST00000553308 CADM1Q9BY67 442 aaKnown RBP7.2□□□□□ -1.26
SYNE2-209ENST00000553308 MROQ9BYG7 248 aa7.2□□□□□ -1.26
SYNE2-209ENST00000553308 PKIBQ9C010 78 aa7.2□□□□□ -1.26
SYNE2-209ENST00000553308 YIPF3Q9GZM5 350 aa7.2□□□□□ -1.26
SYNE2-209ENST00000553308 MTCH1Q9NZJ7 389 aa7.2□□□□□ -1.26
SYNE2-209ENST00000553308 DPM3Q9P2X0 92 aa7.2□□□□□ -1.26
SYNE2-209ENST00000553308 LSM4Q9Y4Z0 139 aaKnown RBP7.2□□□□□ -1.26
SYNE2-209ENST00000553308 V9GYS6 101 aa7.2□□□□□ -1.26
SYNE2-209ENST00000553308 IGKV1-27A0A075B6S5 117 aa7.19□□□□□ -1.26
SYNE2-209ENST00000553308 A0A1B0GTI1 187 aa7.19□□□□□ -1.26
SYNE2-209ENST00000553308 FAM230AA0A1W2PPH8 454 aa7.19□□□□□ -1.26
SYNE2-209ENST00000553308 CCDC182A6NF36 153 aa7.19□□□□□ -1.26
SYNE2-209ENST00000553308 LOC110117498-PIK3R3F6TDL0 507 aa7.19□□□□□ -1.26
SYNE2-209ENST00000553308 PSPNO60542 156 aa7.19□□□□□ -1.26
SYNE2-209ENST00000553308 HAND1O96004 215 aa7.19□□□□□ -1.26
SYNE2-209ENST00000553308 GABRR1P24046 479 aa7.19□□□□□ -1.26
SYNE2-209ENST00000553308 GDNFP39905 211 aa7.19□□□□□ -1.26
SYNE2-209ENST00000553308 MYCNOSP40205 109 aa7.19□□□□□ -1.26
SYNE2-209ENST00000553308 OR3A4PP47883 348 aa7.19□□□□□ -1.26
SYNE2-209ENST00000553308 LUMP51884 338 aaPredicted RBP7.19□□□□□ -1.26
SYNE2-209ENST00000553308 RIDAP52758 137 aaKnown RBP7.19□□□□□ -1.26
SYNE2-209ENST00000553308 CBX1P83916 185 aa7.19□□□□□ -1.26
SYNE2-209ENST00000553308 BDH1Q02338 343 aa7.19□□□□□ -1.26
SYNE2-209ENST00000553308 ROM1Q03395 351 aa7.19□□□□□ -1.26
SYNE2-209ENST00000553308 SNAPC1Q16533 368 aa7.19□□□□□ -1.26
SYNE2-209ENST00000553308 UNQ9370/PRO34162Q6UXP9 181 aa7.19□□□□□ -1.26
SYNE2-209ENST00000553308 PLEKHG7Q6ZR37 379 aa7.19□□□□□ -1.26
SYNE2-209ENST00000553308 ZBTB49Q6ZSB9 765 aa7.19□□□□□ -1.26
SYNE2-209ENST00000553308 TRAPPC6BQ86SZ2 158 aa7.19□□□□□ -1.26
SYNE2-209ENST00000553308 ZNF679Q8IYX0 411 aa7.19□□□□□ -1.26
SYNE2-209ENST00000553308 DEFB107AQ8IZN7 70 aa7.19□□□□□ -1.26
SYNE2-209ENST00000553308 ABHD12Q8N2K0 398 aa7.19□□□□□ -1.26
SYNE2-209ENST00000553308 KLHL30-AS1Q8NEE0 82 aa7.19□□□□□ -1.26
SYNE2-209ENST00000553308 GIPC3Q8TF64 312 aa7.19□□□□□ -1.26
SYNE2-209ENST00000553308 NOL4LQ96MY1 436 aaPredicted RBP7.19□□□□□ -1.26
SYNE2-209ENST00000553308 ELAC2Q9BQ52 826 aaKnown RBP7.19□□□□□ -1.26
SYNE2-209ENST00000553308 MAGIXQ9H6Y5 334 aa7.19□□□□□ -1.26
SYNE2-209ENST00000553308 ARGLU1Q9NWB6 273 aaPredicted RBP7.19□□□□□ -1.26
SYNE2-209ENST00000553308 GAR1Q9NY12 217 aaKnown RBP7.19□□□□□ -1.26
SYNE2-209ENST00000553308 ACTR3BQ9P1U1 418 aa7.19□□□□□ -1.26
SYNE2-209ENST00000553308 DNAJB9Q9UBS3 223 aa7.19□□□□□ -1.26
SYNE2-209ENST00000553308 IKZF2Q9UKS7 526 aa7.19□□□□□ -1.26
SYNE2-209ENST00000553308 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.19□□□□□ -1.26
SYNE2-209ENST00000553308 HHLA2Q9UM44 414 aa7.19□□□□□ -1.26
SYNE2-209ENST00000553308 LEUTXA8MZ59 168 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms