RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 CIB2O75838 187 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 ANP32DO95626 131 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 LCATP04180 440 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 OR8U8P0C7N1 319 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 FAM106CPP0CH98 169 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 DDOSTP39656 456 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 AQP2P41181 271 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 GABRA2P47869 451 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 MRPL19P49406 292 aaKnown RBP4.03□□□□□ -1.76
CKAP4-203ENST00000553039 ENTPD1P49961 510 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 CAPZA1P52907 286 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 RPL27P61353 136 aaKnown RBP4.03□□□□□ -1.76
CKAP4-203ENST00000553039 RPL31P62899 125 aaKnown RBP4.03□□□□□ -1.76
CKAP4-203ENST00000553039 HOXA4Q00056 320 aaPredicted RBP4.03□□□□□ -1.76
CKAP4-203ENST00000553039 FMODQ06828 376 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 SRSF7Q16629 238 aaKnown RBP eCLIP4.03□□□□□ -1.76
CKAP4-203ENST00000553039 PCK2Q16822 640 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 AGKQ53H12 422 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 NANOGP8Q6NSW7 305 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 DHRS4L2Q6PKH6 230 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 ZBTB49Q6ZSB9 765 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 FOXRED2Q8IWF2 684 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 CYB561A3Q8NBI2 242 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 OR11H1Q8NG94 326 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 OR11H6Q8NGC7 330 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 OR2T27Q8NH04 317 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 NDNFQ8TB73 568 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 TSEN15Q8WW01 171 aaKnown RBP4.03□□□□□ -1.76
CKAP4-203ENST00000553039 RFKQ969G6 155 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 TMEM19Q96HH6 336 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 LYZL4Q96KX0 146 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 ZBTB18Q99592 522 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 MCHR1Q99705 422 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 COQ7Q99807 217 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 ADAT1Q9BUB4 502 aaKnown RBP4.03□□□□□ -1.76
CKAP4-203ENST00000553039 KRTAP4-5Q9BYR2 181 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 WDR76Q9H967 626 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 TPT1P8Q9HAU6 139 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 SDR39U1Q9NRG7 319 aaPredicted RBP4.03□□□□□ -1.76
CKAP4-203ENST00000553039 AIG1Q9NVV5 245 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 TAS2R1Q9NYW7 299 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 CCDC167Q9P0B6 97 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 NLKQ9UBE8 527 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 BLOC1S6Q9UL45 172 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 HTR3EA5X5Y0 456 aa4.02□□□□□ -1.77
CKAP4-203ENST00000553039 ANXA2P2A6NMY6 339 aa4.02□□□□□ -1.77
CKAP4-203ENST00000553039 ANKRD30BLA7E2S9 258 aa4.02□□□□□ -1.77
CKAP4-203ENST00000553039 F5H5K5 113 aa4.02□□□□□ -1.77
CKAP4-203ENST00000553039 IMPA2O14732 288 aa4.02□□□□□ -1.77
CKAP4-203ENST00000553039 MRASO14807 208 aa4.02□□□□□ -1.77
CKAP4-203ENST00000553039 SAP30O75446 220 aa4.02□□□□□ -1.77
CKAP4-203ENST00000553039 DUX4L4P0CJ87 422 aa4.02□□□□□ -1.77
CKAP4-203ENST00000553039 MC5RP33032 325 aa4.02□□□□□ -1.77
CKAP4-203ENST00000553039 KIR3DL2P43630 455 aa4.02□□□□□ -1.77
CKAP4-203ENST00000553039 POLR2JP52435 117 aaKnown RBP4.02□□□□□ -1.77
CKAP4-203ENST00000553039 ELF3P78545 371 aaPredicted RBP4.02□□□□□ -1.77
CKAP4-203ENST00000553039 DGUOKQ16854 277 aa4.02□□□□□ -1.77
CKAP4-203ENST00000553039 COQ5Q5HYK3 327 aa4.02□□□□□ -1.77
CKAP4-203ENST00000553039 SPANXN4Q5MJ08 99 aa4.02□□□□□ -1.77
CKAP4-203ENST00000553039 C6orf141Q5SZD1 244 aa4.02□□□□□ -1.77
CKAP4-203ENST00000553039 ZNF626Q68DY1 528 aa4.02□□□□□ -1.77
CKAP4-203ENST00000553039 STUMQ69YW2 141 aa4.02□□□□□ -1.77
CKAP4-203ENST00000553039 LCN8Q6JVE9 175 aa4.02□□□□□ -1.77
CKAP4-203ENST00000553039 WDR73Q6P4I2 378 aa4.02□□□□□ -1.77
CKAP4-203ENST00000553039 CEMP1Q6PRD7 247 aaPredicted RBP4.02□□□□□ -1.77
CKAP4-203ENST00000553039 Q6ZRM9 215 aa4.02□□□□□ -1.77
CKAP4-203ENST00000553039 TSEN54Q7Z6J9 526 aaKnown RBP4.02□□□□□ -1.77
CKAP4-203ENST00000553039 EGFL6Q8IUX8 553 aa4.02□□□□□ -1.77
CKAP4-203ENST00000553039 C11orf53Q8IXP5 236 aa4.02□□□□□ -1.77
CKAP4-203ENST00000553039 C10orf67Q8IYJ2 551 aa4.02□□□□□ -1.77
CKAP4-203ENST00000553039 PGAM4Q8N0Y7 254 aa4.02□□□□□ -1.77
CKAP4-203ENST00000553039 TMEM185AQ8NFB2 350 aa4.02□□□□□ -1.77
CKAP4-203ENST00000553039 OR52N4Q8NGI2 321 aa4.02□□□□□ -1.77
CKAP4-203ENST00000553039 OR1N2Q8NGR9 330 aa4.02□□□□□ -1.77
CKAP4-203ENST00000553039 OR10Z1Q8NGY1 313 aa4.02□□□□□ -1.77
CKAP4-203ENST00000553039 ANGPTL6Q8NI99 470 aa4.02□□□□□ -1.77
CKAP4-203ENST00000553039 CREB3L1Q96BA8 519 aa4.02□□□□□ -1.77
CKAP4-203ENST00000553039 RCN3Q96D15 328 aa4.02□□□□□ -1.77
CKAP4-203ENST00000553039 OR4C12Q96R67 309 aa4.02□□□□□ -1.77
CKAP4-203ENST00000553039 SPXQ9BT56 116 aa4.02□□□□□ -1.77
CKAP4-203ENST00000553039 THTPAQ9BU02 230 aa4.02□□□□□ -1.77
CKAP4-203ENST00000553039 HDHD2Q9H0R4 259 aa4.02□□□□□ -1.77
CKAP4-203ENST00000553039 ANGPT4Q9Y264 503 aa4.02□□□□□ -1.77
CKAP4-203ENST00000553039 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.02□□□□□ -1.77
CKAP4-203ENST00000553039 KRTAP23-1A1A580 65 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 TRAPPC13A5PLN9 417 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 OR2AT4A6NND4 320 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 KPNA4O00629 521 aaPredicted RBP4.01□□□□□ -1.77
CKAP4-203ENST00000553039 XKRYO14609 159 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 CDIPTO14735 213 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 OVOL1O14753 267 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 RER1O15258 196 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 KHDRBS3O75525 346 aaKnown RBP4.01□□□□□ -1.77
CKAP4-203ENST00000553039 DEDDO75618 318 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 CNIH1O95406 144 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 NPPAP01160 153 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 RBP4P02753 201 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 MT-ND1P03886 318 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 ZCCHC18P0CG32 403 aa4.01□□□□□ -1.77
CKAP4-203ENST00000553039 IGHV1-8P0DP01 117 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms