RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 DIMT1Q9UNQ2 313 aaKnown RBP1.86□□□□□ -2.11
CPSF6-207ENST00000551516 UTP11Q9Y3A2 253 aaKnown RBP1.86□□□□□ -2.11
CPSF6-207ENST00000551516 FKBP7Q9Y680 259 aa1.86□□□□□ -2.11
CPSF6-207ENST00000551516 HERC1Q15751 4861 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 HECTD4Q9Y4D8 3996 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 TRAV36DV7A0A075B6V5 113 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 A0A096LPI6 279 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 IGHV2-70DA0A0C4DH43 119 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 A0A0G2JMP0 313 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 A0A0U1RRA0 63 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 A0A0X1KG70 313 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 A0A1B0GUS0 222 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 A0A1B0GW55 424 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 OR6C6A6NF89 314 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 SRRM4A7MD48 611 aaKnown RBP1.85□□□□□ -2.11
CPSF6-207ENST00000551516 MPTX1A8MV57 137 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 CENPBD1B2RD01 187 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 PRR23D1E9PI22 279 aaPredicted RBP1.85□□□□□ -2.11
CPSF6-207ENST00000551516 H3BNH8 94 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 M0R3G1 203 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 FXYD1O00168 92 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 IMPA2O14732 288 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 FFAR1O14842 300 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 CFLARO15519 480 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 ZSCAN12O43309 604 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 DUS4LO95620 317 aaKnown RBP1.85□□□□□ -2.11
CPSF6-207ENST00000551516 PRB2P02812 416 aaPredicted RBP1.85□□□□□ -2.11
CPSF6-207ENST00000551516 FCER2P06734 321 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 DBIP07108 87 aaKnown RBP1.85□□□□□ -2.11
CPSF6-207ENST00000551516 DUX4L2P0CJ85 424 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 DUX4L3P0CJ86 424 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 DUX4L4P0CJ87 422 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 DUX4L5P0CJ88 424 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 DUX4L6P0CJ89 424 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 DUX4L7P0CJ90 424 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 PRR23D2P0DMB1 279 aaPredicted RBP1.85□□□□□ -2.11
CPSF6-207ENST00000551516 MYL2P10916 166 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 ETS2P15036 469 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 TAC1P20366 129 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 PRDX6P30041 224 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 OTX1P32242 354 aaPredicted RBP1.85□□□□□ -2.11
CPSF6-207ENST00000551516 SERPINB5P36952 375 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 CFHR2P36980 270 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 ID1P41134 155 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 RPS5P46782 204 aaKnown RBP1.85□□□□□ -2.11
CPSF6-207ENST00000551516 RIDAP52758 137 aaKnown RBP1.85□□□□□ -2.11
CPSF6-207ENST00000551516 CRIP2P52943 208 aaPredicted RBP1.85□□□□□ -2.11
CPSF6-207ENST00000551516 RPL27P61353 136 aaKnown RBP1.85□□□□□ -2.11
CPSF6-207ENST00000551516 LCN2P80188 198 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 HTD2P86397 168 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 GABPB1Q06547 395 aaPredicted RBP1.85□□□□□ -2.11
CPSF6-207ENST00000551516 PUDPQ08623 228 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 RIGQ13278 110 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 ECSCRQ19T08 205 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 GSG1Q2KHT4 349 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 MOGAT2Q3SYC2 334 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 ZNF404Q494X3 552 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 PAGE3Q5JUK9 113 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 FAM201AQ5SY85 155 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 THEM4Q5T1C6 240 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 DUX4L9Q6RFH8 374 aaPredicted RBP1.85□□□□□ -2.11
CPSF6-207ENST00000551516 METAP1DQ6UB28 335 aaPredicted RBP1.85□□□□□ -2.11
CPSF6-207ENST00000551516 FAM159AQ6UWV7 190 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 CCBE1Q6UXH8 406 aaPredicted RBP1.85□□□□□ -2.11
CPSF6-207ENST00000551516 FBXW12Q6X9E4 464 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 SYT10Q6XYQ8 523 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 WDR86Q86TI4 376 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 ZNF329Q86UD4 541 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 CALHM3Q86XJ0 350 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 RBM45Q8IUH3 476 aaKnown RBP1.85□□□□□ -2.11
CPSF6-207ENST00000551516 LINC00518Q8N0U6 118 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 CNPY4Q8N129 248 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 C4orf33Q8N1A6 199 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 UBE2J2Q8N2K1 259 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 RNF148Q8N7C7 305 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 CLDN22Q8N7P3 220 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 OR4M2Q8NGB6 313 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 OR9I1Q8NGQ6 314 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 OR52P1PQ8NH57 321 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 TCP10LQ8TDR4 215 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 GEMIN6Q8WXD5 167 aaKnown RBP1.85□□□□□ -2.11
CPSF6-207ENST00000551516 TMEM37Q8WXS4 190 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 FCGR1BQ92637 280 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 MAL2Q969L2 176 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 MCHR2Q969V1 340 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 DDIT4LQ96D03 193 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 HAVCR1Q96D42 359 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 TRIM44Q96DX7 344 aaPredicted RBP1.85□□□□□ -2.11
CPSF6-207ENST00000551516 CCDC126Q96EE4 140 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 SLC25A44Q96H78 314 aaPredicted RBP1.85□□□□□ -2.11
CPSF6-207ENST00000551516 LINC00479Q96M42 142 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 OPRPNQ99935 248 aaPredicted RBP1.85□□□□□ -2.11
CPSF6-207ENST00000551516 TMEM246Q9BRR3 403 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 SLC35A5Q9BS91 424 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 DCTN5Q9BTE1 182 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 OR2J1Q9GZK6 312 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 NARFLQ9H6Q4 476 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 SIAEQ9HAT2 523 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 TPT1P8Q9HAU6 139 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 SLCO1B3Q9NPD5 702 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms