RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 TNFRSF19Q9NS68 423 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 MS4A12Q9NXJ0 267 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 XCL2Q9UBD3 114 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 ZNF229Q9UJW7 825 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 SLC17A4Q9Y2C5 497 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 TIMM22Q9Y584 194 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 PLXNA2O75051 1894 aa3.81□□□□□ -1.8
CPSF6-206ENST00000550987 MUC4Q99102 2169 aa3.8□□□□□ -1.8
CPSF6-206ENST00000550987 KCNE1BA0A087WTH5 132 aa3.8□□□□□ -1.8
CPSF6-206ENST00000550987 A0A0B4J2A0 478 aa3.8□□□□□ -1.8
CPSF6-206ENST00000550987 GOLGA6L10A6NI86 522 aa3.8□□□□□ -1.8
CPSF6-206ENST00000550987 F8VP50 259 aa3.8□□□□□ -1.8
CPSF6-206ENST00000550987 H7C0C1 242 aa3.8□□□□□ -1.8
CPSF6-206ENST00000550987 GATCO43716 136 aaKnown RBP3.8□□□□□ -1.8
CPSF6-206ENST00000550987 CHST1O43916 411 aa3.8□□□□□ -1.8
CPSF6-206ENST00000550987 FADS2O95864 444 aaKnown RBP3.8□□□□□ -1.8
CPSF6-206ENST00000550987 IFNA14P01570 189 aa3.8□□□□□ -1.8
CPSF6-206ENST00000550987 HMGN1P05114 100 aa3.8□□□□□ -1.8
CPSF6-206ENST00000550987 HPNP05981 417 aa3.8□□□□□ -1.8
CPSF6-206ENST00000550987 CHTF8P0CG12 524 aa3.8□□□□□ -1.8
CPSF6-206ENST00000550987 CD82P27701 267 aa3.8□□□□□ -1.8
CPSF6-206ENST00000550987 MAGEA2P43356 314 aa3.8□□□□□ -1.8
CPSF6-206ENST00000550987 TGM4P49221 684 aa3.8□□□□□ -1.8
CPSF6-206ENST00000550987 CDC34P49427 236 aaPredicted RBP3.8□□□□□ -1.8
CPSF6-206ENST00000550987 ACOT2P49753 483 aa3.8□□□□□ -1.8
CPSF6-206ENST00000550987 RAB4BP61018 213 aa3.8□□□□□ -1.8
CPSF6-206ENST00000550987 EIF3IQ13347 325 aaKnown RBP3.8□□□□□ -1.8
CPSF6-206ENST00000550987 FZD2Q14332 565 aa3.8□□□□□ -1.8
CPSF6-206ENST00000550987 ITIH4Q14624 930 aa3.8□□□□□ -1.8
CPSF6-206ENST00000550987 KIAA0087Q14695 138 aa3.8□□□□□ -1.8
CPSF6-206ENST00000550987 SPCS2Q15005 226 aa3.8□□□□□ -1.8
CPSF6-206ENST00000550987 TSC22D1Q15714 1073 aa3.8□□□□□ -1.8
CPSF6-206ENST00000550987 RSBN1Q5VWQ0 802 aaPredicted RBP3.8□□□□□ -1.8
CPSF6-206ENST00000550987 STUMQ69YW2 141 aa3.8□□□□□ -1.8
CPSF6-206ENST00000550987 XKRXQ6PP77 449 aa3.8□□□□□ -1.8
CPSF6-206ENST00000550987 SELENOHQ8IZQ5 122 aaKnown RBP3.8□□□□□ -1.8
CPSF6-206ENST00000550987 OR2G3Q8NGZ4 309 aa3.8□□□□□ -1.8
CPSF6-206ENST00000550987 CA5BP1Q8WTZ4 195 aa3.8□□□□□ -1.8
CPSF6-206ENST00000550987 RAD51AP1Q96B01 352 aa3.8□□□□□ -1.8
CPSF6-206ENST00000550987 CCDC127Q96BQ5 260 aa3.8□□□□□ -1.8
CPSF6-206ENST00000550987 ASB9Q96DX5 294 aa3.8□□□□□ -1.8
CPSF6-206ENST00000550987 C9orf72Q96LT7 481 aa3.8□□□□□ -1.8
CPSF6-206ENST00000550987 SERPINB12Q96P63 405 aa3.8□□□□□ -1.8
CPSF6-206ENST00000550987 C7orf50Q9BRJ6 194 aaKnown RBP3.8□□□□□ -1.8
CPSF6-206ENST00000550987 HINT2Q9BX68 163 aa3.8□□□□□ -1.8
CPSF6-206ENST00000550987 OR11A1Q9GZK7 315 aa3.8□□□□□ -1.8
CPSF6-206ENST00000550987 PIGUQ9H490 435 aa3.8□□□□□ -1.8
CPSF6-206ENST00000550987 ASB7Q9H672 318 aa3.8□□□□□ -1.8
CPSF6-206ENST00000550987 RPF2Q9H7B2 306 aaKnown RBP3.8□□□□□ -1.8
CPSF6-206ENST00000550987 RETNQ9HD89 108 aa3.8□□□□□ -1.8
CPSF6-206ENST00000550987 ZC4H2Q9NQZ6 224 aa3.8□□□□□ -1.8
CPSF6-206ENST00000550987 DDX19AQ9NUU7 478 aaKnown RBP3.8□□□□□ -1.8
CPSF6-206ENST00000550987 USE1Q9NZ43 259 aa3.8□□□□□ -1.8
CPSF6-206ENST00000550987 ADA2Q9NZK5 511 aa3.8□□□□□ -1.8
CPSF6-206ENST00000550987 CLCF1Q9UBD9 225 aa3.8□□□□□ -1.8
CPSF6-206ENST00000550987 SHPKQ9UHJ6 478 aa3.8□□□□□ -1.8
CPSF6-206ENST00000550987 RBMX2Q9Y388 322 aaKnown RBP3.8□□□□□ -1.8
CPSF6-206ENST00000550987 DNAH9Q9NYC9 4486 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 NCOA6Q14686 2063 aaPredicted RBP3.79□□□□□ -1.8
CPSF6-206ENST00000550987 IGLV3-10A0A075B6K4 115 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 A0A0G2JLM5 398 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 A0A0G2JN53 185 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 A0A1B0GTI1 187 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 TMEM213A2RRL7 107 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 ZNF726A6NNF4 738 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 LYRM9A8MSI8 78 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 LRRN3E7EW58 273 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 RNASEK-C17orf49H0YIS7 233 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 SCAMP2O15127 329 aaKnown RBP3.79□□□□□ -1.8
CPSF6-206ENST00000550987 SLC31A2O15432 143 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 CTDNEP1O95476 244 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 IGHV4-34P06331 123 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 SLC35E2BP0CK96 405 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 SERPINB5P36952 375 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 CSNK1DP48730 415 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 CAV2P51636 162 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 CCR8P51685 355 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 NUTF2P61970 127 aaKnown RBP3.79□□□□□ -1.8
CPSF6-206ENST00000550987 IRF8Q02556 426 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 RAD51Q06609 339 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 TRAM2Q15035 370 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 AKIRIN2Q53H80 203 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 COQ5Q5HYK3 327 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 C6orf183Q5T699 404 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 ZNF544Q6NX49 715 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 SPESP1Q6UW49 350 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 Q6ZR54 194 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 OAFQ86UD1 273 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 SLC13A5Q86YT5 568 aaPredicted RBP3.79□□□□□ -1.8
CPSF6-206ENST00000550987 TMEM86AQ8N2M4 240 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 OR4F15Q8NGB8 312 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 OR4A15Q8NGL6 344 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 NEIL3Q8TAT5 605 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 MCOLN3Q8TDD5 553 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 DYDC1Q8WWB3 177 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 FAM131CQ96AQ9 280 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 EEF1AKMT3Q96AZ1 226 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 TMEM101Q96IK0 257 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 P2RX4Q99571 388 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 CGREF1Q99674 301 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms