RNA–Protein interactions for RNA: ENST00000550543.1

TPCN1-213, Transcript of two pore segment channel 1, humanhuman

TSL 5

Gene TPCN1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-213ENST00000550543 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.48□□□□□ -0.57
TPCN1-213ENST00000550543 GPR173Q9NS66 373 aa11.48□□□□□ -0.57
TPCN1-213ENST00000550543 CLN6Q9NWW5 311 aa11.48□□□□□ -0.57
TPCN1-213ENST00000550543 SESN1Q9Y6P5 492 aa11.48□□□□□ -0.57
TPCN1-213ENST00000550543 CMYA5Q8N3K9 4069 aa11.48□□□□□ -0.57
TPCN1-213ENST00000550543 PLXNB1O43157 2135 aa11.48□□□□□ -0.57
TPCN1-213ENST00000550543 PSMD9O00233 223 aa11.47□□□□□ -0.57
TPCN1-213ENST00000550543 MRPL3P09001 348 aaKnown RBP11.47□□□□□ -0.57
TPCN1-213ENST00000550543 CD28P10747 220 aa11.47□□□□□ -0.57
TPCN1-213ENST00000550543 CCL1P22362 96 aa11.47□□□□□ -0.57
TPCN1-213ENST00000550543 CXCR4P61073 352 aa11.47□□□□□ -0.57
TPCN1-213ENST00000550543 SLC35A2P78381 396 aa11.47□□□□□ -0.57
TPCN1-213ENST00000550543 SLC34A1Q06495 639 aa11.47□□□□□ -0.57
TPCN1-213ENST00000550543 OXLD1Q5BKU9 147 aa11.47□□□□□ -0.57
TPCN1-213ENST00000550543 NXNL2Q5VZ03 156 aa11.47□□□□□ -0.57
TPCN1-213ENST00000550543 LHFPL4Q7Z7J7 247 aa11.47□□□□□ -0.57
TPCN1-213ENST00000550543 RTN4RL2Q86UN3 420 aa11.47□□□□□ -0.57
TPCN1-213ENST00000550543 SLC35F2Q8IXU6 374 aa11.47□□□□□ -0.57
TPCN1-213ENST00000550543 ZNF676Q8N7Q3 588 aa11.47□□□□□ -0.57
TPCN1-213ENST00000550543 WFDC9Q8NEX5 89 aa11.47□□□□□ -0.57
TPCN1-213ENST00000550543 OR14K1Q8NGZ2 314 aa11.47□□□□□ -0.57
TPCN1-213ENST00000550543 ZNF596Q8TC21 504 aa11.47□□□□□ -0.57
TPCN1-213ENST00000550543 CANT1Q8WVQ1 401 aa11.47□□□□□ -0.57
TPCN1-213ENST00000550543 PHF21AQ96BD5 680 aa11.47□□□□□ -0.57
TPCN1-213ENST00000550543 ZNF488Q96MN9 340 aa11.47□□□□□ -0.57
TPCN1-213ENST00000550543 CITED2Q99967 270 aaPredicted RBP11.47□□□□□ -0.57
TPCN1-213ENST00000550543 CLEC7AQ9BXN2 247 aa11.47□□□□□ -0.57
TPCN1-213ENST00000550543 MMP28Q9H239 520 aa11.47□□□□□ -0.57
TPCN1-213ENST00000550543 ZMAT5Q9UDW3 170 aaKnown RBP11.47□□□□□ -0.57
TPCN1-213ENST00000550543 PCDHGB5Q9Y5G0 923 aa11.47□□□□□ -0.57
TPCN1-213ENST00000550543 CCDC182A6NF36 153 aa11.46□□□□□ -0.57
TPCN1-213ENST00000550543 M0QZK8 103 aa11.46□□□□□ -0.57
TPCN1-213ENST00000550543 SYT7O43581 403 aa11.46□□□□□ -0.57
TPCN1-213ENST00000550543 ZNF737O75373 536 aa11.46□□□□□ -0.57
TPCN1-213ENST00000550543 PF4P02776 101 aa11.46□□□□□ -0.57
TPCN1-213ENST00000550543 HTR1DP28221 377 aa11.46□□□□□ -0.57
TPCN1-213ENST00000550543 CEACAM3P40198 252 aa11.46□□□□□ -0.57
TPCN1-213ENST00000550543 HCCSP53701 268 aa11.46□□□□□ -0.57
TPCN1-213ENST00000550543 CDC42P60953 191 aa11.46□□□□□ -0.57
TPCN1-213ENST00000550543 ACTA2P62736 377 aa11.46□□□□□ -0.57
TPCN1-213ENST00000550543 ACTG2P63267 376 aa11.46□□□□□ -0.57
TPCN1-213ENST00000550543 ACTC1P68032 377 aa11.46□□□□□ -0.57
TPCN1-213ENST00000550543 ACTA1P68133 377 aa11.46□□□□□ -0.57
TPCN1-213ENST00000550543 FLOT2Q14254 428 aa11.46□□□□□ -0.57
TPCN1-213ENST00000550543 DNAL1Q4LDG9 190 aa11.46□□□□□ -0.57
TPCN1-213ENST00000550543 PLA1AQ53H76 456 aa11.46□□□□□ -0.57
TPCN1-213ENST00000550543 TMEM219Q86XT9 240 aa11.46□□□□□ -0.57
TPCN1-213ENST00000550543 CCDC197Q8NCU1 140 aa11.46□□□□□ -0.57
TPCN1-213ENST00000550543 OR4X2Q8NGF9 303 aa11.46□□□□□ -0.57
TPCN1-213ENST00000550543 WIPF2Q8TF74 440 aaPredicted RBP11.46□□□□□ -0.57
TPCN1-213ENST00000550543 PP6455Q8WZ26 134 aa11.46□□□□□ -0.57
TPCN1-213ENST00000550543 DPF1Q92782 380 aa11.46□□□□□ -0.57
TPCN1-213ENST00000550543 BORCS8Q96FH0 119 aa11.46□□□□□ -0.57
TPCN1-213ENST00000550543 RCC1LQ96I51 464 aaKnown RBP11.46□□□□□ -0.57
TPCN1-213ENST00000550543 GAL3ST2Q9H3Q3 398 aa11.46□□□□□ -0.57
TPCN1-213ENST00000550543 LIN7BQ9HAP6 207 aa11.46□□□□□ -0.57
TPCN1-213ENST00000550543 NEK6Q9HC98 313 aa11.46□□□□□ -0.57
TPCN1-213ENST00000550543 TAS2R1Q9NYW7 299 aa11.46□□□□□ -0.57
TPCN1-213ENST00000550543 TSSC4Q9Y5U2 329 aaPredicted RBP11.46□□□□□ -0.57
TPCN1-213ENST00000550543 FAM230AA0A1W2PPH8 454 aa11.45□□□□□ -0.58
TPCN1-213ENST00000550543 MGST3O14880 152 aa11.45□□□□□ -0.58
TPCN1-213ENST00000550543 SRSF10O75494 262 aaKnown RBP11.45□□□□□ -0.58
TPCN1-213ENST00000550543 SULT1C4O75897 302 aa11.45□□□□□ -0.58
TPCN1-213ENST00000550543 ERP29P30040 261 aaKnown RBP11.45□□□□□ -0.58
TPCN1-213ENST00000550543 CEBPDP49716 269 aaPredicted RBP11.45□□□□□ -0.58
TPCN1-213ENST00000550543 CD83Q01151 205 aa11.45□□□□□ -0.58
TPCN1-213ENST00000550543 MFGE8Q08431 387 aaPredicted RBP11.45□□□□□ -0.58
TPCN1-213ENST00000550543 SPIN3Q5JUX0 258 aa11.45□□□□□ -0.58
TPCN1-213ENST00000550543 TMEM236Q5W0B7 351 aa11.45□□□□□ -0.58
TPCN1-213ENST00000550543 CCDC144NLQ6NUI1 221 aa11.45□□□□□ -0.58
TPCN1-213ENST00000550543 CENPVQ7Z7K6 275 aaPredicted RBP11.45□□□□□ -0.58
TPCN1-213ENST00000550543 TMEM179BQ7Z7N9 219 aa11.45□□□□□ -0.58
TPCN1-213ENST00000550543 SPATA24Q86W54 205 aa11.45□□□□□ -0.58
TPCN1-213ENST00000550543 EGFL6Q8IUX8 553 aa11.45□□□□□ -0.58
TPCN1-213ENST00000550543 DNAAF1Q8NEP3 725 aa11.45□□□□□ -0.58
TPCN1-213ENST00000550543 OR5AU1Q8NGC0 362 aa11.45□□□□□ -0.58
TPCN1-213ENST00000550543 EMG1Q92979 244 aaKnown RBP11.45□□□□□ -0.58
TPCN1-213ENST00000550543 OCSTAMPQ9BR26 566 aa11.45□□□□□ -0.58
TPCN1-213ENST00000550543 THTPAQ9BU02 230 aa11.45□□□□□ -0.58
TPCN1-213ENST00000550543 CHST5Q9GZS9 411 aa11.45□□□□□ -0.58
TPCN1-213ENST00000550543 TMEM133Q9H2Q1 129 aa11.45□□□□□ -0.58
TPCN1-213ENST00000550543 RHOFQ9HBH0 211 aa11.45□□□□□ -0.58
TPCN1-213ENST00000550543 KRT84Q9NSB2 600 aa11.45□□□□□ -0.58
TPCN1-213ENST00000550543 AURKAIP1Q9NWT8 199 aaPredicted RBP11.45□□□□□ -0.58
TPCN1-213ENST00000550543 WARS2Q9UGM6 360 aaKnown RBP11.45□□□□□ -0.58
TPCN1-213ENST00000550543 COPS3Q9UNS2 423 aa11.45□□□□□ -0.58
TPCN1-213ENST00000550543 UBE2J1Q9Y385 318 aaPredicted RBP11.45□□□□□ -0.58
TPCN1-213ENST00000550543 IGHV2-26A0A0B4J1V2 119 aa11.44□□□□□ -0.58
TPCN1-213ENST00000550543 A0A1B0GTI1 187 aa11.44□□□□□ -0.58
TPCN1-213ENST00000550543 FAM90A22PA8MWA6 464 aa11.44□□□□□ -0.58
TPCN1-213ENST00000550543 FKBP6O75344 327 aa11.44□□□□□ -0.58
TPCN1-213ENST00000550543 HAND1O96004 215 aa11.44□□□□□ -0.58
TPCN1-213ENST00000550543 PRB2P02812 416 aaPredicted RBP11.44□□□□□ -0.58
TPCN1-213ENST00000550543 UBCP0CG48 685 aaKnown RBP11.44□□□□□ -0.58
TPCN1-213ENST00000550543 PRKACBP22694 351 aa11.44□□□□□ -0.58
TPCN1-213ENST00000550543 GABRR1P24046 479 aa11.44□□□□□ -0.58
TPCN1-213ENST00000550543 RAB13P51153 203 aa11.44□□□□□ -0.58
TPCN1-213ENST00000550543 ATP1B3P54709 279 aa11.44□□□□□ -0.58
TPCN1-213ENST00000550543 TMED1Q13445 227 aa11.44□□□□□ -0.58
TPCN1-213ENST00000550543 EDDM3AQ14507 147 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms