RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 OR13D1Q8NGV5 346 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 OR2T27Q8NH04 317 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 RPS4Y2Q8TD47 263 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 MALSU1Q96EH3 234 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 ZNF488Q96MN9 340 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 CNN2Q99439 309 aaKnown RBP6.16□□□□□ -1.42
NEK3-201ENST00000550331 MNTQ99583 582 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 PRRG3Q9BZD7 231 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 PKIBQ9C010 78 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 ZNF702PQ9H963 129 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 DNAJB9Q9UBS3 223 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 PITPNC1Q9UKF7 332 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 COPS3Q9UNS2 423 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 V9GYS6 101 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 A6NDX4 124 aa6.15□□□□□ -1.42
NEK3-201ENST00000550331 ODF3BA8MYP8 253 aa6.15□□□□□ -1.42
NEK3-201ENST00000550331 K7N7A8 449 aa6.15□□□□□ -1.42
NEK3-201ENST00000550331 ZNF737O75373 536 aa6.15□□□□□ -1.42
NEK3-201ENST00000550331 T-ENOLP0DO92 83 aa6.15□□□□□ -1.42
NEK3-201ENST00000550331 CCL1P22362 96 aa6.15□□□□□ -1.42
NEK3-201ENST00000550331 PRKACGP22612 351 aa6.15□□□□□ -1.42
NEK3-201ENST00000550331 PAX6P26367 422 aa6.15□□□□□ -1.42
NEK3-201ENST00000550331 CEBPDP49716 269 aaPredicted RBP6.15□□□□□ -1.42
NEK3-201ENST00000550331 DYNLT3P51808 116 aa6.15□□□□□ -1.42
NEK3-201ENST00000550331 CRISP1P54107 249 aa6.15□□□□□ -1.42
NEK3-201ENST00000550331 GYS2P54840 703 aa6.15□□□□□ -1.42
NEK3-201ENST00000550331 DLX6P56179 175 aa6.15□□□□□ -1.42
NEK3-201ENST00000550331 ERVK11-1P61568 191 aa6.15□□□□□ -1.42
NEK3-201ENST00000550331 EMX1Q04741 257 aaPredicted RBP6.15□□□□□ -1.42
NEK3-201ENST00000550331 IL24Q13007 206 aa6.15□□□□□ -1.42
NEK3-201ENST00000550331 ZNF273Q14593 569 aa6.15□□□□□ -1.42
NEK3-201ENST00000550331 CNN3Q15417 329 aaKnown RBP6.15□□□□□ -1.42
NEK3-201ENST00000550331 BCL2L15Q5TBC7 163 aa6.15□□□□□ -1.42
NEK3-201ENST00000550331 ZNF626Q68DY1 528 aa6.15□□□□□ -1.42
NEK3-201ENST00000550331 ZNF322Q6U7Q0 402 aaPredicted RBP6.15□□□□□ -1.42
NEK3-201ENST00000550331 ZNF782Q6ZMW2 699 aaPredicted RBP6.15□□□□□ -1.42
NEK3-201ENST00000550331 NDUFA11Q86Y39 141 aa6.15□□□□□ -1.42
NEK3-201ENST00000550331 ELMOD2Q8IZ81 293 aa6.15□□□□□ -1.42
NEK3-201ENST00000550331 OR11H6Q8NGC7 330 aa6.15□□□□□ -1.42
NEK3-201ENST00000550331 OR14K1Q8NGZ2 314 aa6.15□□□□□ -1.42
NEK3-201ENST00000550331 WIPF2Q8TF74 440 aaPredicted RBP6.15□□□□□ -1.42
NEK3-201ENST00000550331 NRBF2Q96F24 287 aa6.15□□□□□ -1.42
NEK3-201ENST00000550331 PAPOLBQ9NRJ5 636 aaKnown RBP6.15□□□□□ -1.42
NEK3-201ENST00000550331 ABCB10Q9NRK6 738 aa6.15□□□□□ -1.42
NEK3-201ENST00000550331 GPR173Q9NS66 373 aa6.15□□□□□ -1.42
NEK3-201ENST00000550331 TVP23BQ9NYZ1 205 aa6.15□□□□□ -1.42
NEK3-201ENST00000550331 OR52A1Q9UKL2 312 aa6.15□□□□□ -1.42
NEK3-201ENST00000550331 IKZF2Q9UKS7 526 aa6.15□□□□□ -1.42
NEK3-201ENST00000550331 SLC22A13Q9Y226 551 aa6.15□□□□□ -1.42
NEK3-201ENST00000550331 SNX5Q9Y5X3 404 aa6.15□□□□□ -1.42
NEK3-201ENST00000550331 R4GMQ9 66 aa6.15□□□□□ -1.42
NEK3-201ENST00000550331 COL7A1Q02388 2944 aa6.14□□□□□ -1.43
NEK3-201ENST00000550331 A0A1B0GTI1 187 aa6.14□□□□□ -1.43
NEK3-201ENST00000550331 PRKYO43930 277 aa6.14□□□□□ -1.43
NEK3-201ENST00000550331 FKBP6O75344 327 aa6.14□□□□□ -1.43
NEK3-201ENST00000550331 FAM107AO95990 144 aa6.14□□□□□ -1.43
NEK3-201ENST00000550331 ALDOBP05062 364 aa6.14□□□□□ -1.43
NEK3-201ENST00000550331 ARG1P05089 322 aa6.14□□□□□ -1.43
NEK3-201ENST00000550331 CHRM2P08172 466 aa6.14□□□□□ -1.43
NEK3-201ENST00000550331 ZNF728P0DKX0 622 aa6.14□□□□□ -1.43
NEK3-201ENST00000550331 IGHV1-8P0DP01 117 aa6.14□□□□□ -1.43
NEK3-201ENST00000550331 CD28P10747 220 aa6.14□□□□□ -1.43
NEK3-201ENST00000550331 PIPP12273 146 aaPredicted RBP6.14□□□□□ -1.43
NEK3-201ENST00000550331 AZGP1P25311 298 aaKnown RBP6.14□□□□□ -1.43
NEK3-201ENST00000550331 CXCR4P61073 352 aa6.14□□□□□ -1.43
NEK3-201ENST00000550331 ESRRGP62508 458 aa6.14□□□□□ -1.43
NEK3-201ENST00000550331 CBX1P83916 185 aa6.14□□□□□ -1.43
NEK3-201ENST00000550331 COL10A1Q03692 680 aa6.14□□□□□ -1.43
NEK3-201ENST00000550331 MEF2CQ06413 473 aaPredicted RBP6.14□□□□□ -1.43
NEK3-201ENST00000550331 HABP2Q14520 560 aaPredicted RBP6.14□□□□□ -1.43
NEK3-201ENST00000550331 PTGES3Q15185 160 aaKnown RBP6.14□□□□□ -1.43
NEK3-201ENST00000550331 MINOS1Q5TGZ0 78 aa6.14□□□□□ -1.43
NEK3-201ENST00000550331 FAHD1Q6P587 224 aa6.14□□□□□ -1.43
NEK3-201ENST00000550331 CCBE1Q6UXH8 406 aaPredicted RBP6.14□□□□□ -1.43
NEK3-201ENST00000550331 ASRGL1Q7L266 308 aa6.14□□□□□ -1.43
NEK3-201ENST00000550331 MEPCEQ7L2J0 689 aaKnown RBP6.14□□□□□ -1.43
NEK3-201ENST00000550331 LHFPL4Q7Z7J7 247 aa6.14□□□□□ -1.43
NEK3-201ENST00000550331 SLC35F2Q8IXU6 374 aa6.14□□□□□ -1.43
NEK3-201ENST00000550331 OR8H2Q8N162 312 aa6.14□□□□□ -1.43
NEK3-201ENST00000550331 DYNAPQ8N1N2 210 aa6.14□□□□□ -1.43
NEK3-201ENST00000550331 ASCC1Q8N9N2 400 aaKnown RBP6.14□□□□□ -1.43
NEK3-201ENST00000550331 CCDC197Q8NCU1 140 aa6.14□□□□□ -1.43
NEK3-201ENST00000550331 OR4F17Q8NGA8 305 aa6.14□□□□□ -1.43
NEK3-201ENST00000550331 ZNF714Q96N38 554 aa6.14□□□□□ -1.43
NEK3-201ENST00000550331 OR4F4Q96R69 305 aa6.14□□□□□ -1.43
NEK3-201ENST00000550331 NKX3-1Q99801 234 aaPredicted RBP6.14□□□□□ -1.43
NEK3-201ENST00000550331 THTPAQ9BU02 230 aa6.14□□□□□ -1.43
NEK3-201ENST00000550331 TTTY10Q9BZA0 68 aa6.14□□□□□ -1.43
NEK3-201ENST00000550331 PRSS22Q9GZN4 317 aa6.14□□□□□ -1.43
NEK3-201ENST00000550331 WNT10AQ9GZT5 417 aa6.14□□□□□ -1.43
NEK3-201ENST00000550331 PLEKHA1Q9HB21 404 aa6.14□□□□□ -1.43
NEK3-201ENST00000550331 ADGRL4Q9HBW9 690 aa6.14□□□□□ -1.43
NEK3-201ENST00000550331 NECAP2Q9NVZ3 263 aa6.14□□□□□ -1.43
NEK3-201ENST00000550331 CLN6Q9NWW5 311 aa6.14□□□□□ -1.43
NEK3-201ENST00000550331 OR14J1Q9UGF5 321 aa6.14□□□□□ -1.43
NEK3-201ENST00000550331 GTF2A1LQ9UNN4 478 aa6.14□□□□□ -1.43
NEK3-201ENST00000550331 MINOS1-NBL1R4GNA1 71 aa6.14□□□□□ -1.43
NEK3-201ENST00000550331 DYNC2H1Q8NCM8 4307 aaKnown RBP6.13□□□□□ -1.43
NEK3-201ENST00000550331 TCRBV3S1A0A5B6 114 aa6.13□□□□□ -1.43
NEK3-201ENST00000550331 hADV38S2A0JD32 116 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms