RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 NDUFB3O43676 98 aa18.7■□□□□ 0.58
BRF1-216ENST00000550208 CYB5AP00167 134 aa18.7■□□□□ 0.58
BRF1-216ENST00000550208 TMEM225BP0DP42 221 aa18.7■□□□□ 0.58
BRF1-216ENST00000550208 CALCBP10092 127 aa18.7■□□□□ 0.58
BRF1-216ENST00000550208 CPEP16870 476 aa18.7■□□□□ 0.58
BRF1-216ENST00000550208 PCMT1P22061 227 aa18.7■□□□□ 0.58
BRF1-216ENST00000550208 BDKRB2P30411 391 aa18.7■□□□□ 0.58
BRF1-216ENST00000550208 CEBPDP49716 269 aaPredicted RBP18.7■□□□□ 0.58
BRF1-216ENST00000550208 ZP1P60852 638 aa18.7■□□□□ 0.58
BRF1-216ENST00000550208 PPP3R1P63098 170 aa18.7■□□□□ 0.58
BRF1-216ENST00000550208 DGUOKQ16854 277 aa18.7■□□□□ 0.58
BRF1-216ENST00000550208 ZNF367Q7RTV3 350 aa18.7■□□□□ 0.58
BRF1-216ENST00000550208 OR4M2Q8NGB6 313 aa18.7■□□□□ 0.58
BRF1-216ENST00000550208 RAB40AQ8WXH6 277 aa18.7■□□□□ 0.58
BRF1-216ENST00000550208 ST8SIA4Q92187 359 aa18.7■□□□□ 0.58
BRF1-216ENST00000550208 TMEM203Q969S6 136 aa18.7■□□□□ 0.58
BRF1-216ENST00000550208 TMPRSS13Q9BYE2 586 aa18.7■□□□□ 0.58
BRF1-216ENST00000550208 SHARPINQ9H0F6 387 aa18.7■□□□□ 0.58
BRF1-216ENST00000550208 RBFOX1Q9NWB1 397 aaKnown RBP18.7■□□□□ 0.58
BRF1-216ENST00000550208 METRNQ9UJH8 293 aa18.7■□□□□ 0.58
BRF1-216ENST00000550208 INSIG2Q9Y5U4 225 aa18.7■□□□□ 0.58
BRF1-216ENST00000550208 NKX6-3A6NJ46 265 aa18.69■□□□□ 0.58
BRF1-216ENST00000550208 C22orf46C9J442 243 aa18.69■□□□□ 0.58
BRF1-216ENST00000550208 SIGLEC5O15389 551 aa18.69■□□□□ 0.58
BRF1-216ENST00000550208 HOXB4P17483 251 aaPredicted RBP18.69■□□□□ 0.58
BRF1-216ENST00000550208 RPS25P62851 125 aaKnown RBP18.69■□□□□ 0.58
BRF1-216ENST00000550208 C1orf229Q6ZS94 237 aaPredicted RBP18.69■□□□□ 0.58
BRF1-216ENST00000550208 C1QL2Q7Z5L3 287 aa18.69■□□□□ 0.58
BRF1-216ENST00000550208 PHC2Q8IXK0 858 aa18.69■□□□□ 0.58
BRF1-216ENST00000550208 SVOPQ8N4V2 548 aa18.69■□□□□ 0.58
BRF1-216ENST00000550208 SDSLQ96GA7 329 aa18.69■□□□□ 0.58
BRF1-216ENST00000550208 GPER1Q99527 375 aa18.69■□□□□ 0.58
BRF1-216ENST00000550208 C7orf69Q9H7B7 122 aa18.69■□□□□ 0.58
BRF1-216ENST00000550208 CKLFQ9UBR5 152 aa18.69■□□□□ 0.58
BRF1-216ENST00000550208 OR14J1Q9UGF5 321 aa18.69■□□□□ 0.58
BRF1-216ENST00000550208 FOXJ3Q9UPW0 622 aa18.69■□□□□ 0.58
BRF1-216ENST00000550208 KIR2DS1A0A191URI9 304 aa18.68■□□□□ 0.58
BRF1-216ENST00000550208 MAGEA13PA6NCF6 341 aa18.68■□□□□ 0.58
BRF1-216ENST00000550208 GABRPO00591 440 aa18.68■□□□□ 0.58
BRF1-216ENST00000550208 KNG1P01042 644 aa18.68■□□□□ 0.58
BRF1-216ENST00000550208 GATA3P23771 443 aa18.68■□□□□ 0.58
BRF1-216ENST00000550208 GP2P55259 537 aaKnown RBP18.68■□□□□ 0.58
BRF1-216ENST00000550208 IL13RA1P78552 427 aa18.68■□□□□ 0.58
BRF1-216ENST00000550208 CHRFAM7AQ494W8 412 aa18.68■□□□□ 0.58
BRF1-216ENST00000550208 ARMCX4Q5H9R4 360 aa18.68■□□□□ 0.58
BRF1-216ENST00000550208 FAM27D1Q5T7N8 215 aa18.68■□□□□ 0.58
BRF1-216ENST00000550208 DDI2Q5TDH0 399 aa18.68■□□□□ 0.58
BRF1-216ENST00000550208 CD276Q5ZPR3 534 aa18.68■□□□□ 0.58
BRF1-216ENST00000550208 BTN2A1Q7KYR7 527 aa18.68■□□□□ 0.58
BRF1-216ENST00000550208 CEACAM19Q7Z692 300 aa18.68■□□□□ 0.58
BRF1-216ENST00000550208 SAXO1Q8IYX7 474 aa18.68■□□□□ 0.58
BRF1-216ENST00000550208 FAM58AQ8N1B3 248 aa18.68■□□□□ 0.58
BRF1-216ENST00000550208 ZSCAN4Q8NAM6 433 aaPredicted RBP18.68■□□□□ 0.58
BRF1-216ENST00000550208 ZNRF1Q8ND25 227 aa18.68■□□□□ 0.58
BRF1-216ENST00000550208 EMG1Q92979 244 aaKnown RBP18.68■□□□□ 0.58
BRF1-216ENST00000550208 DACT3Q96B18 629 aaPredicted RBP18.68■□□□□ 0.58
BRF1-216ENST00000550208 NUDT16L1Q9BRJ7 211 aaKnown RBP18.68■□□□□ 0.58
BRF1-216ENST00000550208 IL36RNQ9UBH0 155 aa18.68■□□□□ 0.58
BRF1-216ENST00000550208 CDC42EP3Q9UKI2 254 aa18.68■□□□□ 0.58
BRF1-216ENST00000550208 SF3B6Q9Y3B4 125 aaKnown RBP18.68■□□□□ 0.58
BRF1-216ENST00000550208 SETD2Q9BYW2 2564 aaPredicted RBP18.68■□□□□ 0.58
BRF1-216ENST00000550208 IGHV2-70DA0A0C4DH43 119 aa18.67■□□□□ 0.58
BRF1-216ENST00000550208 J3QLI3 93 aa18.67■□□□□ 0.58
BRF1-216ENST00000550208 KDM4BO94953 1096 aa18.67■□□□□ 0.58
BRF1-216ENST00000550208 MAS1P04201 325 aa18.67■□□□□ 0.58
BRF1-216ENST00000550208 SFTPBP07988 381 aa18.67■□□□□ 0.58
BRF1-216ENST00000550208 FSTP19883 344 aa18.67■□□□□ 0.58
BRF1-216ENST00000550208 PAX8Q06710 450 aa18.67■□□□□ 0.58
BRF1-216ENST00000550208 LRRC10Q5BKY1 277 aa18.67■□□□□ 0.58
BRF1-216ENST00000550208 ZNF773Q6PK81 442 aa18.67■□□□□ 0.58
BRF1-216ENST00000550208 TMEM91Q6ZNR0 172 aa18.67■□□□□ 0.58
BRF1-216ENST00000550208 Q8IYB0 196 aa18.67■□□□□ 0.58
BRF1-216ENST00000550208 TNFAIP8L1Q8WVP5 186 aa18.67■□□□□ 0.58
BRF1-216ENST00000550208 PPIL3Q9H2H8 161 aaKnown RBP18.67■□□□□ 0.58
BRF1-216ENST00000550208 LPAR3Q9UBY5 353 aa18.67■□□□□ 0.58
BRF1-216ENST00000550208 OPN4Q9UHM6 478 aa18.67■□□□□ 0.58
BRF1-216ENST00000550208 NIPBLQ6KC79 2804 aaeCLIP18.66■□□□□ 0.58
BRF1-216ENST00000550208 SC5DO75845 299 aa18.66■□□□□ 0.58
BRF1-216ENST00000550208 PRKACAP17612 351 aa18.66■□□□□ 0.58
BRF1-216ENST00000550208 MAPK3P27361 379 aaPredicted RBP18.66■□□□□ 0.58
BRF1-216ENST00000550208 DUSP1P28562 367 aa18.66■□□□□ 0.58
BRF1-216ENST00000550208 ZNF93P35789 620 aaPredicted RBP18.66■□□□□ 0.58
BRF1-216ENST00000550208 SNU13P55769 128 aaKnown RBP18.66■□□□□ 0.58
BRF1-216ENST00000550208 SSX1Q16384 188 aa18.66■□□□□ 0.58
BRF1-216ENST00000550208 UBE2UQ5VVX9 321 aa18.66■□□□□ 0.58
BRF1-216ENST00000550208 THRSPQ92748 146 aa18.66■□□□□ 0.58
BRF1-216ENST00000550208 HMG20AQ9NP66 347 aa18.66■□□□□ 0.58
BRF1-216ENST00000550208 SLC25A10Q9UBX3 287 aaPredicted RBP18.66■□□□□ 0.58
BRF1-216ENST00000550208 ECDO95905 644 aaPredicted RBP18.65■□□□□ 0.58
BRF1-216ENST00000550208 NDUFB7P17568 137 aa18.65■□□□□ 0.58
BRF1-216ENST00000550208 HNF1AP20823 631 aa18.65■□□□□ 0.58
BRF1-216ENST00000550208 PTGFRP43088 359 aa18.65■□□□□ 0.58
BRF1-216ENST00000550208 OR3A4PP47883 348 aa18.65■□□□□ 0.58
BRF1-216ENST00000550208 KCTD21Q4G0X4 260 aa18.65■□□□□ 0.58
BRF1-216ENST00000550208 BTNL3Q6UXE8 466 aa18.65■□□□□ 0.58
BRF1-216ENST00000550208 ASCL4Q6XD76 172 aa18.65■□□□□ 0.58
BRF1-216ENST00000550208 TMEM185AQ8NFB2 350 aa18.65■□□□□ 0.58
BRF1-216ENST00000550208 PXT1Q8NFP0 134 aa18.65■□□□□ 0.58
BRF1-216ENST00000550208 CPNE2Q96FN4 548 aaPredicted RBP18.65■□□□□ 0.58
BRF1-216ENST00000550208 ING4Q9UNL4 249 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms