RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 ACTA1P68133 377 aa13.29□□□□□ -0.28
VPS29-207ENST00000549970 CCDC121Q6ZUS5 278 aa13.29□□□□□ -0.28
VPS29-207ENST00000549970 OR2G2Q8NGZ5 317 aa13.29□□□□□ -0.28
VPS29-207ENST00000549970 EMG1Q92979 244 aaKnown RBP13.29□□□□□ -0.28
VPS29-207ENST00000549970 RNF166Q96A37 237 aaPredicted RBP13.29□□□□□ -0.28
VPS29-207ENST00000549970 C10orf35Q96D05 121 aa13.29□□□□□ -0.28
VPS29-207ENST00000549970 ADAT3Q96EY9 351 aaPredicted RBP13.29□□□□□ -0.28
VPS29-207ENST00000549970 AJUBAQ96IF1 538 aa13.29□□□□□ -0.28
VPS29-207ENST00000549970 C16orf95Q9H693 158 aa13.29□□□□□ -0.28
VPS29-207ENST00000549970 AASSQ9UDR5 926 aa13.29□□□□□ -0.28
VPS29-207ENST00000549970 M0QZ24 198 aa13.28□□□□□ -0.28
VPS29-207ENST00000549970 ZNF737O75373 536 aa13.28□□□□□ -0.28
VPS29-207ENST00000549970 TSPAN9O75954 239 aa13.28□□□□□ -0.28
VPS29-207ENST00000549970 POU3F4P49335 361 aa13.28□□□□□ -0.28
VPS29-207ENST00000549970 LGALS4P56470 323 aa13.28□□□□□ -0.28
VPS29-207ENST00000549970 SNRPGP62308 76 aaKnown RBP13.28□□□□□ -0.28
VPS29-207ENST00000549970 LRRC75BQ2VPJ9 315 aa13.28□□□□□ -0.28
VPS29-207ENST00000549970 TMEM244Q5VVB8 128 aa13.28□□□□□ -0.28
VPS29-207ENST00000549970 MEDAGQ5VYS4 303 aa13.28□□□□□ -0.28
VPS29-207ENST00000549970 ZFP1Q6P2D0 407 aa13.28□□□□□ -0.28
VPS29-207ENST00000549970 GDPD3Q7L5L3 318 aa13.28□□□□□ -0.28
VPS29-207ENST00000549970 EGFL6Q8IUX8 553 aa13.28□□□□□ -0.28
VPS29-207ENST00000549970 CBR4Q8N4T8 237 aa13.28□□□□□ -0.28
VPS29-207ENST00000549970 PP6455Q8WZ26 134 aa13.28□□□□□ -0.28
VPS29-207ENST00000549970 TCF7L1Q9HCS4 588 aa13.28□□□□□ -0.28
VPS29-207ENST00000549970 FRRS1LQ9P0K9 344 aa13.28□□□□□ -0.28
VPS29-207ENST00000549970 IL36RNQ9UBH0 155 aa13.28□□□□□ -0.28
VPS29-207ENST00000549970 IGKV1-9A0A0C4DH69 117 aa13.27□□□□□ -0.29
VPS29-207ENST00000549970 J3QRE1 110 aa13.27□□□□□ -0.29
VPS29-207ENST00000549970 SLC16A6O15403 523 aa13.27□□□□□ -0.29
VPS29-207ENST00000549970 HTR1AP08908 422 aa13.27□□□□□ -0.29
VPS29-207ENST00000549970 ZNF20P17024 532 aa13.27□□□□□ -0.29
VPS29-207ENST00000549970 RBP2P50120 134 aa13.27□□□□□ -0.29
VPS29-207ENST00000549970 ATP1B3P54709 279 aa13.27□□□□□ -0.29
VPS29-207ENST00000549970 DLX6P56179 175 aa13.27□□□□□ -0.29
VPS29-207ENST00000549970 NANOS3P60323 173 aaKnown RBP13.27□□□□□ -0.29
VPS29-207ENST00000549970 EDDM3AQ14507 147 aa13.27□□□□□ -0.29
VPS29-207ENST00000549970 OCLNQ16625 522 aa13.27□□□□□ -0.29
VPS29-207ENST00000549970 SLC25A30Q5SVS4 291 aa13.27□□□□□ -0.29
VPS29-207ENST00000549970 ASPHD2Q6ICH7 369 aa13.27□□□□□ -0.29
VPS29-207ENST00000549970 SLC35E4Q6ICL7 350 aa13.27□□□□□ -0.29
VPS29-207ENST00000549970 KCTD20Q7Z5Y7 419 aa13.27□□□□□ -0.29
VPS29-207ENST00000549970 FGGYQ96C11 551 aa13.27□□□□□ -0.29
VPS29-207ENST00000549970 MEGF9Q9H1U4 602 aa13.27□□□□□ -0.29
VPS29-207ENST00000549970 RBFOX1Q9NWB1 397 aaKnown RBP13.27□□□□□ -0.29
VPS29-207ENST00000549970 GMPPBQ9Y5P6 360 aa13.27□□□□□ -0.29
VPS29-207ENST00000549970 DSCAML1Q8TD84 2053 aa13.27□□□□□ -0.29
VPS29-207ENST00000549970 TMEM82A0PJX8 343 aa13.26□□□□□ -0.29
VPS29-207ENST00000549970 C17orf98A8MV24 154 aa13.26□□□□□ -0.29
VPS29-207ENST00000549970 E9PQ18 207 aa13.26□□□□□ -0.29
VPS29-207ENST00000549970 J3QLW9 94 aa13.26□□□□□ -0.29
VPS29-207ENST00000549970 HAND1O96004 215 aa13.26□□□□□ -0.29
VPS29-207ENST00000549970 CYB5AP00167 134 aa13.26□□□□□ -0.29
VPS29-207ENST00000549970 ZNF728P0DKX0 622 aa13.26□□□□□ -0.29
VPS29-207ENST00000549970 CALCBP10092 127 aa13.26□□□□□ -0.29
VPS29-207ENST00000549970 ZNF19P17023 458 aa13.26□□□□□ -0.29
VPS29-207ENST00000549970 ATF1P18846 271 aa13.26□□□□□ -0.29
VPS29-207ENST00000549970 BCL3P20749 454 aa13.26□□□□□ -0.29
VPS29-207ENST00000549970 AZGP1P25311 298 aaKnown RBP13.26□□□□□ -0.29
VPS29-207ENST00000549970 GABRA5P31644 462 aa13.26□□□□□ -0.29
VPS29-207ENST00000549970 NPBWR2P48146 333 aa13.26□□□□□ -0.29
VPS29-207ENST00000549970 SNU13P55769 128 aaKnown RBP13.26□□□□□ -0.29
VPS29-207ENST00000549970 MTCP1P56278 107 aa13.26□□□□□ -0.29
VPS29-207ENST00000549970 PLA1AQ53H76 456 aa13.26□□□□□ -0.29
VPS29-207ENST00000549970 LHFPL4Q7Z7J7 247 aa13.26□□□□□ -0.29
VPS29-207ENST00000549970 Q8IYB0 196 aa13.26□□□□□ -0.29
VPS29-207ENST00000549970 OR8H2Q8N162 312 aa13.26□□□□□ -0.29
VPS29-207ENST00000549970 ACBD7Q8N6N7 88 aa13.26□□□□□ -0.29
VPS29-207ENST00000549970 DNAAF1Q8NEP3 725 aa13.26□□□□□ -0.29
VPS29-207ENST00000549970 OR10AC1Q8NH08 325 aa13.26□□□□□ -0.29
VPS29-207ENST00000549970 PPP1R35Q8TAP8 253 aa13.26□□□□□ -0.29
VPS29-207ENST00000549970 RFT1Q96AA3 541 aa13.26□□□□□ -0.29
VPS29-207ENST00000549970 LGALS12Q96DT0 336 aa13.26□□□□□ -0.29
VPS29-207ENST00000549970 PELI1Q96FA3 418 aa13.26□□□□□ -0.29
VPS29-207ENST00000549970 C4orf36Q96KX1 117 aa13.26□□□□□ -0.29
VPS29-207ENST00000549970 SNX22Q96L94 193 aa13.26□□□□□ -0.29
VPS29-207ENST00000549970 MBOAT4Q96T53 435 aa13.26□□□□□ -0.29
VPS29-207ENST00000549970 CHST6Q9GZX3 395 aa13.26□□□□□ -0.29
VPS29-207ENST00000549970 SNTNA6NMZ2 147 aa13.25□□□□□ -0.29
VPS29-207ENST00000549970 IGHA1P01876 353 aa13.25□□□□□ -0.29
VPS29-207ENST00000549970 ARG1P05089 322 aa13.25□□□□□ -0.29
VPS29-207ENST00000549970 ISG15P05161 165 aa13.25□□□□□ -0.29
VPS29-207ENST00000549970 OCM2P0CE71 109 aa13.25□□□□□ -0.29
VPS29-207ENST00000549970 OCMP0CE72 109 aaPredicted RBP13.25□□□□□ -0.29
VPS29-207ENST00000549970 PRKACBP22694 351 aa13.25□□□□□ -0.29
VPS29-207ENST00000549970 GABRR1P24046 479 aa13.25□□□□□ -0.29
VPS29-207ENST00000549970 DUSP1P28562 367 aa13.25□□□□□ -0.29
VPS29-207ENST00000549970 ACTA2P62736 377 aa13.25□□□□□ -0.29
VPS29-207ENST00000549970 ACTG2P63267 376 aa13.25□□□□□ -0.29
VPS29-207ENST00000549970 ZNF91Q05481 1191 aa13.25□□□□□ -0.29
VPS29-207ENST00000549970 FDX2Q6P4F2 183 aa13.25□□□□□ -0.29
VPS29-207ENST00000549970 LHFPL2Q6ZUX7 228 aa13.25□□□□□ -0.29
VPS29-207ENST00000549970 UTS2BQ765I0 119 aa13.25□□□□□ -0.29
VPS29-207ENST00000549970 TCF23Q7RTU1 214 aa13.25□□□□□ -0.29
VPS29-207ENST00000549970 FAM58AQ8N1B3 248 aa13.25□□□□□ -0.29
VPS29-207ENST00000549970 TPRX1Q8N7U7 411 aa13.25□□□□□ -0.29
VPS29-207ENST00000549970 OR51A4Q8NGJ6 313 aa13.25□□□□□ -0.29
VPS29-207ENST00000549970 OR13C3Q8NGS6 347 aa13.25□□□□□ -0.29
VPS29-207ENST00000549970 OPALINQ96PE5 141 aa13.25□□□□□ -0.29
VPS29-207ENST00000549970 MMP27Q9H306 513 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms