RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 TMEM123Q8N131 208 aa8.6□□□□□ -1.03
SMARCD1-205ENST00000548573 SLC25A45Q8N413 288 aa8.6□□□□□ -1.03
SMARCD1-205ENST00000548573 LRRC18Q8N456 261 aa8.6□□□□□ -1.03
SMARCD1-205ENST00000548573 INTS12Q96CB8 462 aaKnown RBP8.6□□□□□ -1.03
SMARCD1-205ENST00000548573 OR51M1Q9H341 326 aa8.6□□□□□ -1.03
SMARCD1-205ENST00000548573 SLC2A9Q9NRM0 540 aa8.6□□□□□ -1.03
SMARCD1-205ENST00000548573 PLEK2Q9NYT0 353 aa8.6□□□□□ -1.03
SMARCD1-205ENST00000548573 C19orf25Q9UFG5 118 aaPredicted RBP8.6□□□□□ -1.03
SMARCD1-205ENST00000548573 NXT1Q9UKK6 140 aaKnown RBP8.6□□□□□ -1.03
SMARCD1-205ENST00000548573 K7N7A8 449 aa8.59□□□□□ -1.03
SMARCD1-205ENST00000548573 TP53I11O14683 189 aa8.59□□□□□ -1.03
SMARCD1-205ENST00000548573 XRCC2O43543 280 aa8.59□□□□□ -1.03
SMARCD1-205ENST00000548573 SCRG1O75711 98 aa8.59□□□□□ -1.03
SMARCD1-205ENST00000548573 TIAF1O95411 115 aa8.59□□□□□ -1.03
SMARCD1-205ENST00000548573 DBHP09172 617 aa8.59□□□□□ -1.03
SMARCD1-205ENST00000548573 MYF5P13349 255 aa8.59□□□□□ -1.03
SMARCD1-205ENST00000548573 OPRM1P35372 400 aa8.59□□□□□ -1.03
SMARCD1-205ENST00000548573 FHITP49789 147 aa8.59□□□□□ -1.03
SMARCD1-205ENST00000548573 CLINT1Q14677 625 aa8.59□□□□□ -1.03
SMARCD1-205ENST00000548573 FAM27BQ5VT28 67 aa8.59□□□□□ -1.03
SMARCD1-205ENST00000548573 LHFPL2Q6ZUX7 228 aa8.59□□□□□ -1.03
SMARCD1-205ENST00000548573 FAM24BQ8N5W8 94 aa8.59□□□□□ -1.03
SMARCD1-205ENST00000548573 CCDC71LQ8N9Z2 235 aa8.59□□□□□ -1.03
SMARCD1-205ENST00000548573 OR8G5Q8NG78 346 aa8.59□□□□□ -1.03
SMARCD1-205ENST00000548573 OR52M1Q8NGK5 317 aa8.59□□□□□ -1.03
SMARCD1-205ENST00000548573 TCTEX1D2Q8WW35 142 aa8.59□□□□□ -1.03
SMARCD1-205ENST00000548573 MOB3AQ96BX8 217 aa8.59□□□□□ -1.03
SMARCD1-205ENST00000548573 ZNF385AQ96PM9 386 aaKnown RBP8.59□□□□□ -1.03
SMARCD1-205ENST00000548573 SPSB2Q99619 263 aa8.59□□□□□ -1.03
SMARCD1-205ENST00000548573 C20orf24Q9BUV8 137 aa8.59□□□□□ -1.03
SMARCD1-205ENST00000548573 DEFB126Q9BYW3 111 aa8.59□□□□□ -1.03
SMARCD1-205ENST00000548573 SH3BGRL3Q9H299 93 aa8.59□□□□□ -1.03
SMARCD1-205ENST00000548573 NIT2Q9NQR4 276 aa8.59□□□□□ -1.03
SMARCD1-205ENST00000548573 CHCHD2Q9Y6H1 151 aaPredicted RBP8.59□□□□□ -1.03
SMARCD1-205ENST00000548573 CCDC187A0A096LP49 1063 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 hCG_1809904A0A1W2PP81 198 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 A0A1W2PR64 198 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 A0A1W2PRV1 198 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 NPIPA2E9PIF3 369 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 NPIPA3F8WFD2 350 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 AP4M1O00189 453 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 SPRY1O43609 319 aaPredicted RBP8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 ANGPTL7O43827 346 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 OR8U8P0C7N1 319 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 DAOP14920 347 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 CRYGSP22914 178 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 S100PP25815 95 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 RBP2P50120 134 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 NHLH2Q02577 135 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 CHAF1BQ13112 559 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 GNMTQ14749 295 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 TGIF1Q15583 401 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 PHLDA2Q53GA4 152 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 ZNF385CQ66K41 422 aaPredicted RBP8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 OR4D5Q8NGN0 318 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 CD300LFQ8TDQ1 290 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 FBXO17Q96EF6 278 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 BOD1Q96IK1 185 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 OR6C1Q96RD1 312 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 RSRP1Q9BUV0 290 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 RBM24Q9BX46 236 aaKnown RBP8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 ZNF286AQ9HBT8 521 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 FOXD3Q9UJU5 478 aaPredicted RBP8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 RCL1Q9Y2P8 373 aaKnown RBP8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 FBXO7Q9Y3I1 522 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 IGKV1-27A0A075B6S5 117 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 FAM230AA0A1W2PPH8 454 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 C1QL1O75973 258 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 CDS2O95674 445 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 IFNA17P01571 189 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 CYC1P08574 325 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 PNLIPP16233 465 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 EIF2S3P41091 472 aaKnown RBP8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 FXYD4P59646 89 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 SRPXP78539 464 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 MRPS34P82930 218 aaKnown RBP8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 EWSR1Q01844 656 aaKnown RBP eCLIP8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 ZNF266Q14584 549 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 RAB35Q15286 201 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 OR8B8Q15620 311 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 ADAM5Q6NVV9 412 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 SLC22A25Q6T423 547 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 ZNF574Q6ZN55 896 aaPredicted RBP8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 MAML2Q8IZL2 1156 aaPredicted RBP8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 ZNF565Q8N9K5 539 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 HSD17B11Q8NBQ5 300 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 OR10AD1Q8NGE0 317 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 OR5L1Q8NGL2 311 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 MARS2Q96GW9 593 aaKnown RBP8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 REEP6Q96HR9 211 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 YPEL4Q96NS1 127 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 C11orf1Q9H5F2 150 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 UNKLQ9H9P5 680 aaKnown RBP8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 BCO1Q9HAY6 547 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 IL36GQ9NZH8 169 aa8.58□□□□□ -1.04
SMARCD1-205ENST00000548573 BTBD17A6NE02 478 aa8.57□□□□□ -1.04
SMARCD1-205ENST00000548573 PHF1O43189 567 aaPredicted RBP8.57□□□□□ -1.04
SMARCD1-205ENST00000548573 ARG1P05089 322 aa8.57□□□□□ -1.04
SMARCD1-205ENST00000548573 POLR2GP62487 172 aaKnown RBP eCLIP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms