RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 STEAP4Q687X5 459 aa0.73□□□□□ -2.29
CEP290-204ENST00000547926 ZYG11AQ6WRX3 759 aa0.73□□□□□ -2.29
CEP290-204ENST00000547926 PAGE2Q7Z2X7 111 aa0.73□□□□□ -2.29
CEP290-204ENST00000547926 FAM81AQ8TBF8 368 aa0.73□□□□□ -2.29
CEP290-204ENST00000547926 SFXN5Q8TD22 340 aa0.73□□□□□ -2.29
CEP290-204ENST00000547926 ASZ1Q8WWH4 475 aa0.73□□□□□ -2.29
CEP290-204ENST00000547926 PEBP4Q96S96 227 aa0.73□□□□□ -2.29
CEP290-204ENST00000547926 GPR21Q99679 349 aa0.73□□□□□ -2.29
CEP290-204ENST00000547926 TBL1XR1Q9BZK7 514 aa0.73□□□□□ -2.29
CEP290-204ENST00000547926 ARHGEF28Q8N1W1 1705 aaKnown RBP0.73□□□□□ -2.29
CEP290-204ENST00000547926 YTHDC2Q9H6S0 1430 aaKnown RBP0.73□□□□□ -2.29
CEP290-204ENST00000547926 A0A1W2PNM2 257 aa0.73□□□□□ -2.29
CEP290-204ENST00000547926 ENTPD6O75354 484 aa0.73□□□□□ -2.29
CEP290-204ENST00000547926 HLA-HP01893 362 aa0.73□□□□□ -2.29
CEP290-204ENST00000547926 IFNW1P05000 195 aa0.73□□□□□ -2.29
CEP290-204ENST00000547926 ERCC1P07992 297 aaPredicted RBP0.73□□□□□ -2.29
CEP290-204ENST00000547926 CTSGP08311 255 aa0.73□□□□□ -2.29
CEP290-204ENST00000547926 GNRHRP30968 328 aa0.73□□□□□ -2.29
CEP290-204ENST00000547926 PRSS3P35030 304 aa0.73□□□□□ -2.29
CEP290-204ENST00000547926 GRB2P62993 217 aaKnown RBP0.73□□□□□ -2.29
CEP290-204ENST00000547926 TFDP2Q14188 446 aa0.73□□□□□ -2.29
CEP290-204ENST00000547926 KRTAP21-1Q3LI58 79 aa0.73□□□□□ -2.29
CEP290-204ENST00000547926 TWF2Q6IBS0 349 aaKnown RBP0.73□□□□□ -2.29
CEP290-204ENST00000547926 RWDD4Q6NW29 188 aaKnown RBP0.73□□□□□ -2.29
CEP290-204ENST00000547926 TMEM144Q7Z5S9 345 aa0.73□□□□□ -2.29
CEP290-204ENST00000547926 UNC93AQ86WB7 457 aa0.73□□□□□ -2.29
CEP290-204ENST00000547926 GABRG1Q8N1C3 465 aa0.73□□□□□ -2.29
CEP290-204ENST00000547926 JAGN1Q8N5M9 183 aa0.73□□□□□ -2.29
CEP290-204ENST00000547926 OR2M7Q8NG81 312 aa0.73□□□□□ -2.29
CEP290-204ENST00000547926 ISG20Q96AZ6 181 aaKnown RBP0.73□□□□□ -2.29
CEP290-204ENST00000547926 SNF8Q96H20 258 aa0.73□□□□□ -2.29
CEP290-204ENST00000547926 ZNF75AQ96N20 296 aa0.73□□□□□ -2.29
CEP290-204ENST00000547926 RDH12Q96NR8 316 aa0.73□□□□□ -2.29
CEP290-204ENST00000547926 GSDMAQ96QA5 445 aa0.73□□□□□ -2.29
CEP290-204ENST00000547926 PRO3102Q9H379 93 aa0.73□□□□□ -2.29
CEP290-204ENST00000547926 CCNB1IP1Q9NPC3 277 aa0.73□□□□□ -2.29
CEP290-204ENST00000547926 TREX1Q9NSU2 369 aa0.73□□□□□ -2.29
CEP290-204ENST00000547926 NDRG2Q9UN36 371 aaKnown RBP0.73□□□□□ -2.29
CEP290-204ENST00000547926 PPIL1Q9Y3C6 166 aa0.73□□□□□ -2.29
CEP290-204ENST00000547926 INSRP06213 1382 aa0.72□□□□□ -2.29
CEP290-204ENST00000547926 MAP3K5Q99683 1374 aa0.72□□□□□ -2.29
CEP290-204ENST00000547926 SIGLEC1Q9BZZ2 1709 aa0.72□□□□□ -2.29
CEP290-204ENST00000547926 MAP3K1Q13233 1512 aa0.72□□□□□ -2.29
CEP290-204ENST00000547926 TULP4Q9NRJ4 1543 aa0.72□□□□□ -2.29
CEP290-204ENST00000547926 ELP1O95163 1332 aa0.72□□□□□ -2.29
CEP290-204ENST00000547926 KCNE1BA0A087WTH5 132 aa0.72□□□□□ -2.29
CEP290-204ENST00000547926 A0A0G2JMP0 313 aa0.72□□□□□ -2.29
CEP290-204ENST00000547926 A0A0X1KG70 313 aa0.72□□□□□ -2.29
CEP290-204ENST00000547926 GGTLC3B5MD39 225 aa0.72□□□□□ -2.29
CEP290-204ENST00000547926 LINC01619G3V211 115 aa0.72□□□□□ -2.29
CEP290-204ENST00000547926 MPHOSPH10O00566 681 aaKnown RBP0.72□□□□□ -2.29
CEP290-204ENST00000547926 SYNGR2O43760 224 aa0.72□□□□□ -2.29
CEP290-204ENST00000547926 KRT14P02533 472 aa0.72□□□□□ -2.29
CEP290-204ENST00000547926 IGKV1-16P04430 117 aa0.72□□□□□ -2.29
CEP290-204ENST00000547926 KRT16P08779 473 aa0.72□□□□□ -2.29
CEP290-204ENST00000547926 IFI30P13284 250 aa0.72□□□□□ -2.29
CEP290-204ENST00000547926 HMOX2P30519 316 aa0.72□□□□□ -2.29
CEP290-204ENST00000547926 ATP5G2Q06055 141 aa0.72□□□□□ -2.29
CEP290-204ENST00000547926 KDSRQ06136 332 aa0.72□□□□□ -2.29
CEP290-204ENST00000547926 TPBGQ13641 420 aa0.72□□□□□ -2.29
CEP290-204ENST00000547926 PCOTHQ58A44 107 aa0.72□□□□□ -2.29
CEP290-204ENST00000547926 SLC30A8Q8IWU4 369 aa0.72□□□□□ -2.29
CEP290-204ENST00000547926 ZCCHC24Q8N2G6 241 aaKnown RBP0.72□□□□□ -2.29
CEP290-204ENST00000547926 EIF4E3Q8N5X7 224 aaKnown RBP0.72□□□□□ -2.29
CEP290-204ENST00000547926 FAM57AQ8TBR7 257 aa0.72□□□□□ -2.29
CEP290-204ENST00000547926 UBE2E2Q96LR5 201 aa0.72□□□□□ -2.29
CEP290-204ENST00000547926 SCGB3A2Q96PL1 93 aa0.72□□□□□ -2.29
CEP290-204ENST00000547926 CCDC77Q9BR77 488 aa0.72□□□□□ -2.29
CEP290-204ENST00000547926 TMEM38BQ9NVV0 291 aa0.72□□□□□ -2.29
CEP290-204ENST00000547926 GCNT4Q9P109 453 aa0.72□□□□□ -2.29
CEP290-204ENST00000547926 SRRM2Q9UQ35 2752 aaKnown RBP0.72□□□□□ -2.29
CEP290-204ENST00000547926 FGD6Q6ZV73 1430 aa0.72□□□□□ -2.29
CEP290-204ENST00000547926 PLXNB3Q9ULL4 1909 aa0.72□□□□□ -2.29
CEP290-204ENST00000547926 TACC2O95359 2948 aa0.72□□□□□ -2.29
CEP290-204ENST00000547926 KIAA0100Q14667 2235 aaKnown RBP0.72□□□□□ -2.29
CEP290-204ENST00000547926 COL7A1Q02388 2944 aa0.72□□□□□ -2.29
CEP290-204ENST00000547926 WDR7Q9Y4E6 1490 aa0.72□□□□□ -2.29
CEP290-204ENST00000547926 TARBP1Q13395 1621 aaKnown RBP0.72□□□□□ -2.29
CEP290-204ENST00000547926 DISP2A7MBM2 1401 aa0.71□□□□□ -2.3
CEP290-204ENST00000547926 CTAG2O75638 210 aa0.71□□□□□ -2.3
CEP290-204ENST00000547926 PRB1P04280 392 aa0.71□□□□□ -2.3
CEP290-204ENST00000547926 TUFMP49411 452 aaKnown RBP0.71□□□□□ -2.3
CEP290-204ENST00000547926 MERTKQ12866 999 aa0.71□□□□□ -2.3
CEP290-204ENST00000547926 ITIH4Q14624 930 aa0.71□□□□□ -2.3
CEP290-204ENST00000547926 RPEL1Q2QD12 228 aa0.71□□□□□ -2.3
CEP290-204ENST00000547926 TMPPEQ6ZT21 453 aa0.71□□□□□ -2.3
CEP290-204ENST00000547926 SPATA31E1Q6ZUB1 1445 aa0.71□□□□□ -2.3
CEP290-204ENST00000547926 CENPQQ7L2Z9 268 aaPredicted RBP0.71□□□□□ -2.3
CEP290-204ENST00000547926 RNF10Q8N5U6 811 aaKnown RBP0.71□□□□□ -2.3
CEP290-204ENST00000547926 PQLC3Q8N755 202 aa0.71□□□□□ -2.3
CEP290-204ENST00000547926 YIPF5Q969M3 257 aa0.71□□□□□ -2.3
CEP290-204ENST00000547926 CHP1Q99653 195 aa0.71□□□□□ -2.3
CEP290-204ENST00000547926 NAPGQ99747 312 aaPredicted RBP0.71□□□□□ -2.3
CEP290-204ENST00000547926 AGMATQ9BSE5 352 aa0.71□□□□□ -2.3
CEP290-204ENST00000547926 FAM192AQ9GZU8 254 aa0.71□□□□□ -2.3
CEP290-204ENST00000547926 FANCEQ9HB96 536 aa0.71□□□□□ -2.3
CEP290-204ENST00000547926 DOPEY2Q9Y3R5 2298 aa0.71□□□□□ -2.3
CEP290-204ENST00000547926 DISP1Q96F81 1524 aa0.71□□□□□ -2.3
CEP290-204ENST00000547926 KDM5DQ9BY66 1539 aa0.71□□□□□ -2.3
CEP290-204ENST00000547926 BRD4O60885 1362 aaPredicted RBP0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms