RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 ACTR3P61158 418 aa16.43■□□□□ 0.22
SSH1-207ENST00000547862 LDLRAD2Q5SZI1 272 aa16.43■□□□□ 0.22
SSH1-207ENST00000547862 KPRPQ5T749 579 aaPredicted RBP16.43■□□□□ 0.22
SSH1-207ENST00000547862 FAHD1Q6P587 224 aa16.43■□□□□ 0.22
SSH1-207ENST00000547862 TPRX1Q8N7U7 411 aa16.43■□□□□ 0.22
SSH1-207ENST00000547862 NDNFQ8TB73 568 aa16.43■□□□□ 0.22
SSH1-207ENST00000547862 CEP19Q96LK0 163 aa16.43■□□□□ 0.22
SSH1-207ENST00000547862 CITED2Q99967 270 aaPredicted RBP16.43■□□□□ 0.22
SSH1-207ENST00000547862 PKIBQ9C010 78 aa16.43■□□□□ 0.22
SSH1-207ENST00000547862 CLN6Q9NWW5 311 aa16.43■□□□□ 0.22
SSH1-207ENST00000547862 IL36RNQ9UBH0 155 aa16.43■□□□□ 0.22
SSH1-207ENST00000547862 TCRBV3S1A0A5B6 114 aa16.42■□□□□ 0.22
SSH1-207ENST00000547862 A6NDX4 124 aa16.42■□□□□ 0.22
SSH1-207ENST00000547862 FAM90A8PA6NJQ4 464 aa16.42■□□□□ 0.22
SSH1-207ENST00000547862 VGLL3A8MV65 326 aa16.42■□□□□ 0.22
SSH1-207ENST00000547862 KRT8P05787 483 aa16.42■□□□□ 0.22
SSH1-207ENST00000547862 IGHV1-8P0DP01 117 aa16.42■□□□□ 0.22
SSH1-207ENST00000547862 HOXB6P17509 224 aaKnown RBP16.42■□□□□ 0.22
SSH1-207ENST00000547862 EPHA2P29317 976 aa16.42■□□□□ 0.22
SSH1-207ENST00000547862 ERVK11-1P61568 191 aa16.42■□□□□ 0.22
SSH1-207ENST00000547862 SLC34A1Q06495 639 aa16.42■□□□□ 0.22
SSH1-207ENST00000547862 IL24Q13007 206 aa16.42■□□□□ 0.22
SSH1-207ENST00000547862 DNAL1Q4LDG9 190 aa16.42■□□□□ 0.22
SSH1-207ENST00000547862 NXNL2Q5VZ03 156 aa16.42■□□□□ 0.22
SSH1-207ENST00000547862 ZNF626Q68DY1 528 aa16.42■□□□□ 0.22
SSH1-207ENST00000547862 TCF23Q7RTU1 214 aa16.42■□□□□ 0.22
SSH1-207ENST00000547862 TMEM163Q8TC26 289 aa16.42■□□□□ 0.22
SSH1-207ENST00000547862 SGCDQ92629 289 aa16.42■□□□□ 0.22
SSH1-207ENST00000547862 EMG1Q92979 244 aaKnown RBP16.42■□□□□ 0.22
SSH1-207ENST00000547862 ZNF714Q96N38 554 aa16.42■□□□□ 0.22
SSH1-207ENST00000547862 PRSS22Q9GZN4 317 aa16.42■□□□□ 0.22
SSH1-207ENST00000547862 CHST6Q9GZX3 395 aa16.42■□□□□ 0.22
SSH1-207ENST00000547862 SYT7O43581 403 aa16.41■□□□□ 0.22
SSH1-207ENST00000547862 ZNF737O75373 536 aa16.41■□□□□ 0.22
SSH1-207ENST00000547862 CHRM2P08172 466 aa16.41■□□□□ 0.22
SSH1-207ENST00000547862 GABRR1P24046 479 aa16.41■□□□□ 0.22
SSH1-207ENST00000547862 VDAC2P45880 294 aaPredicted RBP16.41■□□□□ 0.22
SSH1-207ENST00000547862 OR12D2P58182 307 aa16.41■□□□□ 0.22
SSH1-207ENST00000547862 ACTA2P62736 377 aa16.41■□□□□ 0.22
SSH1-207ENST00000547862 ACTG2P63267 376 aa16.41■□□□□ 0.22
SSH1-207ENST00000547862 ACTC1P68032 377 aa16.41■□□□□ 0.22
SSH1-207ENST00000547862 ACTA1P68133 377 aa16.41■□□□□ 0.22
SSH1-207ENST00000547862 FBLN7Q53RD9 439 aa16.41■□□□□ 0.22
SSH1-207ENST00000547862 Q6ZS46 218 aa16.41■□□□□ 0.22
SSH1-207ENST00000547862 SLC25A26Q70HW3 274 aa16.41■□□□□ 0.22
SSH1-207ENST00000547862 NDUFA11Q86Y39 141 aa16.41■□□□□ 0.22
SSH1-207ENST00000547862 OR8H2Q8N162 312 aa16.41■□□□□ 0.22
SSH1-207ENST00000547862 ZNF676Q8N7Q3 588 aa16.41■□□□□ 0.22
SSH1-207ENST00000547862 DTX3Q8N9I9 347 aa16.41■□□□□ 0.22
SSH1-207ENST00000547862 MNTQ99583 582 aa16.41■□□□□ 0.22
SSH1-207ENST00000547862 MTCH1Q9NZJ7 389 aa16.41■□□□□ 0.22
SSH1-207ENST00000547862 PITPNC1Q9UKF7 332 aa16.41■□□□□ 0.22
SSH1-207ENST00000547862 POMPQ9Y244 141 aa16.41■□□□□ 0.22
SSH1-207ENST00000547862 IGKV1-27A0A075B6S5 117 aa16.4■□□□□ 0.22
SSH1-207ENST00000547862 XPNPEP2O43895 674 aa16.4■□□□□ 0.22
SSH1-207ENST00000547862 IGHA1P01876 353 aa16.4■□□□□ 0.22
SSH1-207ENST00000547862 CALCBP10092 127 aa16.4■□□□□ 0.22
SSH1-207ENST00000547862 UBE2V2Q15819 145 aa16.4■□□□□ 0.22
SSH1-207ENST00000547862 AADACL4Q5VUY2 407 aa16.4■□□□□ 0.22
SSH1-207ENST00000547862 SLX4IPQ5VYV7 408 aa16.4■□□□□ 0.22
SSH1-207ENST00000547862 TRAPPC6BQ86SZ2 158 aa16.4■□□□□ 0.22
SSH1-207ENST00000547862 GID4Q8IVV7 300 aa16.4■□□□□ 0.22
SSH1-207ENST00000547862 MALSU1Q96EH3 234 aa16.4■□□□□ 0.22
SSH1-207ENST00000547862 TMEM82A0PJX8 343 aa16.39■□□□□ 0.21
SSH1-207ENST00000547862 DHRS7CA6NNS2 312 aa16.39■□□□□ 0.21
SSH1-207ENST00000547862 HAND1O96004 215 aa16.39■□□□□ 0.21
SSH1-207ENST00000547862 CCL1P22362 96 aa16.39■□□□□ 0.21
SSH1-207ENST00000547862 DUSP1P28562 367 aa16.39■□□□□ 0.21
SSH1-207ENST00000547862 POU3F4P49335 361 aa16.39■□□□□ 0.21
SSH1-207ENST00000547862 GRK1Q15835 563 aa16.39■□□□□ 0.21
SSH1-207ENST00000547862 C12orf73Q69YU5 71 aa16.39■□□□□ 0.21
SSH1-207ENST00000547862 REC114Q7Z4M0 266 aa16.39■□□□□ 0.21
SSH1-207ENST00000547862 CATSPERDQ86XM0 798 aa16.39■□□□□ 0.21
SSH1-207ENST00000547862 EGFL6Q8IUX8 553 aa16.39■□□□□ 0.21
SSH1-207ENST00000547862 Q8N2B8 174 aa16.39■□□□□ 0.21
SSH1-207ENST00000547862 OR10H4Q8NGA5 316 aa16.39■□□□□ 0.21
SSH1-207ENST00000547862 OR4F17Q8NGA8 305 aa16.39■□□□□ 0.21
SSH1-207ENST00000547862 OR11H6Q8NGC7 330 aa16.39■□□□□ 0.21
SSH1-207ENST00000547862 PHF21AQ96BD5 680 aa16.39■□□□□ 0.21
SSH1-207ENST00000547862 NRBF2Q96F24 287 aa16.39■□□□□ 0.21
SSH1-207ENST00000547862 BORCS8Q96FH0 119 aa16.39■□□□□ 0.21
SSH1-207ENST00000547862 OR4F4Q96R69 305 aa16.39■□□□□ 0.21
SSH1-207ENST00000547862 ADI1Q9BV57 179 aa16.39■□□□□ 0.21
SSH1-207ENST00000547862 NOTCH3Q9UM47 2321 aa16.39■□□□□ 0.21
SSH1-207ENST00000547862 IGHV2-26A0A0B4J1V2 119 aa16.38■□□□□ 0.21
SSH1-207ENST00000547862 LOC107986453A0A1B0GWG9 222 aa16.38■□□□□ 0.21
SSH1-207ENST00000547862 FAM172BPA6NC97 362 aa16.38■□□□□ 0.21
SSH1-207ENST00000547862 ZAR1LA6NP61 321 aa16.38■□□□□ 0.21
SSH1-207ENST00000547862 GATBO75879 557 aaKnown RBP16.38■□□□□ 0.21
SSH1-207ENST00000547862 DNAJC8O75937 253 aaPredicted RBP16.38■□□□□ 0.21
SSH1-207ENST00000547862 RBP4P02753 201 aa16.38■□□□□ 0.21
SSH1-207ENST00000547862 BLCAPP62952 87 aa16.38■□□□□ 0.21
SSH1-207ENST00000547862 EMX1Q04741 257 aaPredicted RBP16.38■□□□□ 0.21
SSH1-207ENST00000547862 UTP4Q969X6 686 aaKnown RBP16.38■□□□□ 0.21
SSH1-207ENST00000547862 CHST5Q9GZS9 411 aa16.38■□□□□ 0.21
SSH1-207ENST00000547862 RBFOX1Q9NWB1 397 aaKnown RBP16.38■□□□□ 0.21
SSH1-207ENST00000547862 AURKAIP1Q9NWT8 199 aaPredicted RBP16.38■□□□□ 0.21
SSH1-207ENST00000547862 SESN1Q9Y6P5 492 aa16.38■□□□□ 0.21
SSH1-207ENST00000547862 A0A1W2PQL4 384 aaPredicted RBP16.37■□□□□ 0.21
SSH1-207ENST00000547862 hADV38S2A0JD32 116 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms