RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 EMG1Q92979 244 aaKnown RBP13.36□□□□□ -0.27
TRAFD1-203ENST00000547063 SELENOIQ9C0D9 397 aa13.36□□□□□ -0.27
TRAFD1-203ENST00000547063 ATG5Q9H1Y0 275 aa13.36□□□□□ -0.27
TRAFD1-203ENST00000547063 HES4Q9HCC6 221 aa13.36□□□□□ -0.27
TRAFD1-203ENST00000547063 HMG20AQ9NP66 347 aa13.36□□□□□ -0.27
TRAFD1-203ENST00000547063 TPPPO94811 219 aa13.35□□□□□ -0.27
TRAFD1-203ENST00000547063 LHBP01229 141 aa13.35□□□□□ -0.27
TRAFD1-203ENST00000547063 HPXP02790 462 aa13.35□□□□□ -0.27
TRAFD1-203ENST00000547063 PRKACAP17612 351 aa13.35□□□□□ -0.27
TRAFD1-203ENST00000547063 NPBWR2P48146 333 aa13.35□□□□□ -0.27
TRAFD1-203ENST00000547063 EFNA4P52798 201 aa13.35□□□□□ -0.27
TRAFD1-203ENST00000547063 RBM11P57052 281 aaKnown RBP13.35□□□□□ -0.27
TRAFD1-203ENST00000547063 IL13RA2Q14627 380 aa13.35□□□□□ -0.27
TRAFD1-203ENST00000547063 ARL6IP1Q15041 203 aa13.35□□□□□ -0.27
TRAFD1-203ENST00000547063 SPRNQ5BIV9 151 aa13.35□□□□□ -0.27
TRAFD1-203ENST00000547063 SPANXN2Q5MJ10 180 aa13.35□□□□□ -0.27
TRAFD1-203ENST00000547063 ZNF787Q6DD87 383 aa13.35□□□□□ -0.27
TRAFD1-203ENST00000547063 OR10K2Q6IF99 312 aa13.35□□□□□ -0.27
TRAFD1-203ENST00000547063 BAIAP2L2Q6UXY1 529 aa13.35□□□□□ -0.27
TRAFD1-203ENST00000547063 LAX1Q8IWV1 398 aa13.35□□□□□ -0.27
TRAFD1-203ENST00000547063 C15orf40Q8WUR7 153 aa13.35□□□□□ -0.27
TRAFD1-203ENST00000547063 IGFBPL1Q8WX77 278 aa13.35□□□□□ -0.27
TRAFD1-203ENST00000547063 S100ZQ8WXG8 99 aa13.35□□□□□ -0.27
TRAFD1-203ENST00000547063 CCL17Q92583 94 aa13.35□□□□□ -0.27
TRAFD1-203ENST00000547063 SLC25A38Q96DW6 304 aa13.35□□□□□ -0.27
TRAFD1-203ENST00000547063 DIRAS2Q96HU8 199 aa13.35□□□□□ -0.27
TRAFD1-203ENST00000547063 Q96M66 194 aa13.35□□□□□ -0.27
TRAFD1-203ENST00000547063 NUDT16L1Q9BRJ7 211 aaKnown RBP13.35□□□□□ -0.27
TRAFD1-203ENST00000547063 TM2D1Q9BX74 207 aa13.35□□□□□ -0.27
TRAFD1-203ENST00000547063 BANF2Q9H503 90 aa13.35□□□□□ -0.27
TRAFD1-203ENST00000547063 MYOZ1Q9NP98 299 aaPredicted RBP13.35□□□□□ -0.27
TRAFD1-203ENST00000547063 TMEM106BQ9NUM4 274 aa13.35□□□□□ -0.27
TRAFD1-203ENST00000547063 RBFOX1Q9NWB1 397 aaKnown RBP13.35□□□□□ -0.27
TRAFD1-203ENST00000547063 DNAJB11Q9UBS4 358 aa13.35□□□□□ -0.27
TRAFD1-203ENST00000547063 ST3GAL6Q9Y274 331 aa13.35□□□□□ -0.27
TRAFD1-203ENST00000547063 COL12A1Q99715 3063 aa13.35□□□□□ -0.27
TRAFD1-203ENST00000547063 DYSFO75923 2080 aa13.35□□□□□ -0.27
TRAFD1-203ENST00000547063 F12P00748 615 aaPredicted RBP13.34□□□□□ -0.27
TRAFD1-203ENST00000547063 MUC1P15941 1255 aaPredicted RBP13.34□□□□□ -0.27
TRAFD1-203ENST00000547063 ELK1P19419 428 aa13.34□□□□□ -0.27
TRAFD1-203ENST00000547063 TNFSF8P32971 234 aa13.34□□□□□ -0.27
TRAFD1-203ENST00000547063 CDKN1AP38936 164 aa13.34□□□□□ -0.27
TRAFD1-203ENST00000547063 PMELP40967 661 aa13.34□□□□□ -0.27
TRAFD1-203ENST00000547063 PITPNBP48739 271 aa13.34□□□□□ -0.27
TRAFD1-203ENST00000547063 MPV17LQ2QL34 196 aa13.34□□□□□ -0.27
TRAFD1-203ENST00000547063 METAP1DQ6UB28 335 aaPredicted RBP13.34□□□□□ -0.27
TRAFD1-203ENST00000547063 ACP7Q6ZNF0 438 aa13.34□□□□□ -0.27
TRAFD1-203ENST00000547063 PEG10Q86TG7 708 aaKnown RBP13.34□□□□□ -0.27
TRAFD1-203ENST00000547063 CMTM4Q8IZR5 234 aa13.34□□□□□ -0.27
TRAFD1-203ENST00000547063 GCSAMQ8N6F7 178 aa13.34□□□□□ -0.27
TRAFD1-203ENST00000547063 LPAR5Q9H1C0 372 aa13.34□□□□□ -0.27
TRAFD1-203ENST00000547063 MIXL1Q9H2W2 232 aa13.34□□□□□ -0.27
TRAFD1-203ENST00000547063 KCNK15Q9H427 330 aa13.34□□□□□ -0.27
TRAFD1-203ENST00000547063 SEBOXQ9HB31 216 aaPredicted RBP13.34□□□□□ -0.27
TRAFD1-203ENST00000547063 BARX1Q9HBU1 254 aaPredicted RBP13.34□□□□□ -0.27
TRAFD1-203ENST00000547063 TANC2Q9HCD6 1990 aa13.34□□□□□ -0.27
TRAFD1-203ENST00000547063 A0A1W2PP11 408 aa13.33□□□□□ -0.28
TRAFD1-203ENST00000547063 TMEM178BH3BS89 294 aa13.33□□□□□ -0.28
TRAFD1-203ENST00000547063 KNG1P01042 644 aa13.33□□□□□ -0.28
TRAFD1-203ENST00000547063 EIF4EP06730 217 aaKnown RBP13.33□□□□□ -0.28
TRAFD1-203ENST00000547063 DAOP14920 347 aa13.33□□□□□ -0.28
TRAFD1-203ENST00000547063 NR4A2P43354 598 aa13.33□□□□□ -0.28
TRAFD1-203ENST00000547063 EFNB2P52799 333 aa13.33□□□□□ -0.28
TRAFD1-203ENST00000547063 ZNF146Q15072 292 aa13.33□□□□□ -0.28
TRAFD1-203ENST00000547063 KCNJ8Q15842 424 aa13.33□□□□□ -0.28
TRAFD1-203ENST00000547063 MICBQ29980 383 aa13.33□□□□□ -0.28
TRAFD1-203ENST00000547063 FAM89BQ8N5H3 189 aa13.33□□□□□ -0.28
TRAFD1-203ENST00000547063 ZNF488Q96MN9 340 aa13.33□□□□□ -0.28
TRAFD1-203ENST00000547063 TSC22D3Q99576 134 aa13.33□□□□□ -0.28
TRAFD1-203ENST00000547063 GAL3ST1Q99999 423 aa13.33□□□□□ -0.28
TRAFD1-203ENST00000547063 SPACA1Q9HBV2 294 aa13.33□□□□□ -0.28
TRAFD1-203ENST00000547063 EXTL2Q9UBQ6 330 aa13.33□□□□□ -0.28
TRAFD1-203ENST00000547063 PLEKHA6Q9Y2H5 1048 aa13.33□□□□□ -0.28
TRAFD1-203ENST00000547063 FASNP49327 2511 aaKnown RBP13.33□□□□□ -0.28
TRAFD1-203ENST00000547063 TRAV38-1A0A0B4J264 116 aa13.32□□□□□ -0.28
TRAFD1-203ENST00000547063 F8VVB4 439 aa13.32□□□□□ -0.28
TRAFD1-203ENST00000547063 F8VWA3 439 aa13.32□□□□□ -0.28
TRAFD1-203ENST00000547063 SH2D1BO14796 132 aa13.32□□□□□ -0.28
TRAFD1-203ENST00000547063 XRCC3O43542 346 aa13.32□□□□□ -0.28
TRAFD1-203ENST00000547063 FSTL3O95633 263 aa13.32□□□□□ -0.28
TRAFD1-203ENST00000547063 PTBP1P26599 531 aaKnown RBP eCLIP13.32□□□□□ -0.28
TRAFD1-203ENST00000547063 ETV6P41212 452 aa13.32□□□□□ -0.28
TRAFD1-203ENST00000547063 VEGFCP49767 419 aa13.32□□□□□ -0.28
TRAFD1-203ENST00000547063 ZNF45Q02386 682 aa13.32□□□□□ -0.28
TRAFD1-203ENST00000547063 TMEM69Q5SWH9 247 aa13.32□□□□□ -0.28
TRAFD1-203ENST00000547063 CNIH2Q6PI25 160 aa13.32□□□□□ -0.28
TRAFD1-203ENST00000547063 CCDC190Q86UF4 302 aa13.32□□□□□ -0.28
TRAFD1-203ENST00000547063 BOLLQ8N9W6 283 aaKnown RBP13.32□□□□□ -0.28
TRAFD1-203ENST00000547063 CHST4Q8NCG5 386 aa13.32□□□□□ -0.28
TRAFD1-203ENST00000547063 OR10R2Q8NGX6 335 aa13.32□□□□□ -0.28
TRAFD1-203ENST00000547063 TIMD4Q96H15 378 aa13.32□□□□□ -0.28
TRAFD1-203ENST00000547063 NEDD4LQ96PU5 975 aa13.32□□□□□ -0.28
TRAFD1-203ENST00000547063 IFT22Q9H7X7 185 aa13.32□□□□□ -0.28
TRAFD1-203ENST00000547063 NLKQ9UBE8 527 aa13.32□□□□□ -0.28
TRAFD1-203ENST00000547063 GCN1Q92616 2671 aaKnown RBP13.32□□□□□ -0.28
TRAFD1-203ENST00000547063 PPIAL4EA0A075B759 164 aa13.31□□□□□ -0.28
TRAFD1-203ENST00000547063 FABP12A6NFH5 140 aa13.31□□□□□ -0.28
TRAFD1-203ENST00000547063 OOEPA6NGQ2 149 aa13.31□□□□□ -0.28
TRAFD1-203ENST00000547063 CLDN25C9JDP6 229 aa13.31□□□□□ -0.28
TRAFD1-203ENST00000547063 PPIAL4DF5H284 164 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms