RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 ISPDA4D126 451 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 MAGEA13PA6NCF6 341 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 TRIM64BA6NI03 449 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 TMEM178BH3BS89 294 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 GABRPO00591 440 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 CDIPTO14735 213 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 PIN1P1O15428 100 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 PPIHO43447 177 aaKnown RBP5.31□□□□□ -1.56
PRKDC-211ENST00000546304 CYB5R3P00387 301 aaPredicted RBP5.31□□□□□ -1.56
PRKDC-211ENST00000546304 UCHL1P09936 223 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 SLC25A16P16260 332 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 ATF1P18846 271 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 MPZP25189 248 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 CD80P33681 288 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 TGFBR2P37173 567 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 RBMXP38159 391 aaKnown RBP5.31□□□□□ -1.56
PRKDC-211ENST00000546304 GPR6P46095 362 aaPredicted RBP5.31□□□□□ -1.56
PRKDC-211ENST00000546304 HAAOP46952 286 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 POU3F4P49335 361 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 RBP2P50120 134 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 MECP2P51608 486 aaKnown RBP5.31□□□□□ -1.56
PRKDC-211ENST00000546304 FUT6P51993 359 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 BTG1P62324 171 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 HOXA4Q00056 320 aaPredicted RBP5.31□□□□□ -1.56
PRKDC-211ENST00000546304 FABP5Q01469 135 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 ACSM3Q53FZ2 586 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 HSD17B12Q53GQ0 312 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 FAM76BQ5HYJ3 339 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 AVPI1Q5T686 147 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 DDI2Q5TDH0 399 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 CD200R1LQ6Q8B3 271 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 ZNF826PQ6ZT77 177 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 CEACAM19Q7Z692 300 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 NKAIN3Q8N8D7 197 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 SCCPDHQ8NBX0 429 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 OR5D18Q8NGL1 313 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 LRRC29Q8WV35 223 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 AQP3Q92482 292 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 RPL3LQ92901 407 aaKnown RBP5.31□□□□□ -1.56
PRKDC-211ENST00000546304 RFT1Q96AA3 541 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 ORAI1Q96D31 301 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 SPACA5Q96QH8 159 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 PKIBQ9C010 78 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 OR51I2Q9H344 312 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 TMEM138Q9NPI0 162 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 POLDIP2Q9Y2S7 368 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 WIPI2Q9Y4P8 454 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 NPTNQ9Y639 398 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 DSCAML1Q8TD84 2053 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 A0A096LNT2 108 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 IGHV4-61A0A0C4DH41 118 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 VWC2LB2RUY7 222 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 SRRM5B3KS81 715 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.3□□□□□ -1.56
PRKDC-211ENST00000546304 MAGEB3O15480 346 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 SYNGR1O43759 233 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 RHBDL1O75783 438 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 ARL6IP5O75915 188 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 SCGB1D2O95969 90 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 IGHV2-70P01814 119 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 PGA5P0DJD9 388 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 CD36P16671 472 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 IGFBP3P17936 291 aaPredicted RBP5.3□□□□□ -1.56
PRKDC-211ENST00000546304 EGR1P18146 543 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 GALP22466 123 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 COL8A2P25067 703 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 BDKRB2P30411 391 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 CFHR2P36980 270 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 PMELP40967 661 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 NR4A2P43354 598 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 ATP1B3P54709 279 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 MTCP1P56278 107 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 TMEM33P57088 247 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 IL24Q13007 206 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 ICAM4Q14773 271 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 ZMYND11Q15326 602 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 KISS1Q15726 138 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 SMIM21Q3B7S5 101 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 TIMM50Q3ZCQ8 353 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 FAM201AQ5SY85 155 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 TMEM91Q6ZNR0 172 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 SLC25A26Q70HW3 274 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 PEG10Q86TG7 708 aaKnown RBP5.3□□□□□ -1.56
PRKDC-211ENST00000546304 CALHM1Q8IU99 346 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 C11orf53Q8IXP5 236 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 MUC20Q8N307 709 aaPredicted RBP5.3□□□□□ -1.56
PRKDC-211ENST00000546304 GCSAMQ8N6F7 178 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 BOLLQ8N9W6 283 aaKnown RBP5.3□□□□□ -1.56
PRKDC-211ENST00000546304 POC1AQ8NBT0 407 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 OR52N4Q8NGI2 321 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 OR10Z1Q8NGY1 313 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 PHYHIPQ92561 330 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 RAB1CQ92928 201 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 CLUHP3Q96NS8 147 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 GAL3ST1Q99999 423 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 NRIP2Q9BQI9 281 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 FAM192AQ9GZU8 254 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 SLITRK2Q9H156 845 aa5.3□□□□□ -1.56
PRKDC-211ENST00000546304 PPIL3Q9H2H8 161 aaKnown RBP5.3□□□□□ -1.56
PRKDC-211ENST00000546304 NARFLQ9H6Q4 476 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms