RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 CPEP16870 476 aa13.98□□□□□ -0.17
LTBR-215ENST00000546296 AMY2BP19961 511 aa13.98□□□□□ -0.17
LTBR-215ENST00000546296 BCL3P20749 454 aa13.98□□□□□ -0.17
LTBR-215ENST00000546296 SRP14P37108 136 aaKnown RBP13.98□□□□□ -0.17
LTBR-215ENST00000546296 NPBWR2P48146 333 aa13.98□□□□□ -0.17
LTBR-215ENST00000546296 CAPZA1P52907 286 aa13.98□□□□□ -0.17
LTBR-215ENST00000546296 DDI2Q5TDH0 399 aa13.98□□□□□ -0.17
LTBR-215ENST00000546296 DUX4L9Q6RFH8 374 aaPredicted RBP13.98□□□□□ -0.17
LTBR-215ENST00000546296 FIP1L1Q6UN15 594 aaKnown RBP13.98□□□□□ -0.17
LTBR-215ENST00000546296 ZNF788Q6ZQV5 615 aa13.98□□□□□ -0.17
LTBR-215ENST00000546296 CEACAM19Q7Z692 300 aa13.98□□□□□ -0.17
LTBR-215ENST00000546296 SAXO1Q8IYX7 474 aa13.98□□□□□ -0.17
LTBR-215ENST00000546296 SPARTQ8N0X7 666 aa13.98□□□□□ -0.17
LTBR-215ENST00000546296 FAM58AQ8N1B3 248 aa13.98□□□□□ -0.17
LTBR-215ENST00000546296 ZSCAN4Q8NAM6 433 aaPredicted RBP13.98□□□□□ -0.17
LTBR-215ENST00000546296 TNFAIP8L1Q8WVP5 186 aa13.98□□□□□ -0.17
LTBR-215ENST00000546296 RAB40AQ8WXH6 277 aa13.98□□□□□ -0.17
LTBR-215ENST00000546296 FAM192AQ9GZU8 254 aa13.98□□□□□ -0.17
LTBR-215ENST00000546296 C7orf69Q9H7B7 122 aa13.98□□□□□ -0.17
LTBR-215ENST00000546296 ELL3Q9HB65 397 aaPredicted RBP13.98□□□□□ -0.17
LTBR-215ENST00000546296 SMURF1Q9HCE7 757 aa13.98□□□□□ -0.17
LTBR-215ENST00000546296 DUX4Q9UBX2 424 aa13.98□□□□□ -0.17
LTBR-215ENST00000546296 TRAV8-7A0A075B6U6 113 aa13.97□□□□□ -0.17
LTBR-215ENST00000546296 IGHV2-70DA0A0C4DH43 119 aa13.97□□□□□ -0.17
LTBR-215ENST00000546296 SIGLEC5O15389 551 aa13.97□□□□□ -0.17
LTBR-215ENST00000546296 GPX5O75715 221 aa13.97□□□□□ -0.17
LTBR-215ENST00000546296 ECDO95905 644 aaPredicted RBP13.97□□□□□ -0.17
LTBR-215ENST00000546296 CALCBP10092 127 aa13.97□□□□□ -0.17
LTBR-215ENST00000546296 NDUFB7P17568 137 aa13.97□□□□□ -0.17
LTBR-215ENST00000546296 IGFBP3P17936 291 aaPredicted RBP13.97□□□□□ -0.17
LTBR-215ENST00000546296 ZNF93P35789 620 aaPredicted RBP13.97□□□□□ -0.17
LTBR-215ENST00000546296 TRAM1Q15629 374 aa13.97□□□□□ -0.17
LTBR-215ENST00000546296 ARMCX4Q5H9R4 360 aa13.97□□□□□ -0.17
LTBR-215ENST00000546296 ZNF773Q6PK81 442 aa13.97□□□□□ -0.17
LTBR-215ENST00000546296 UNQ9370/PRO34162Q6UXP9 181 aa13.97□□□□□ -0.17
LTBR-215ENST00000546296 BTN2A1Q7KYR7 527 aa13.97□□□□□ -0.17
LTBR-215ENST00000546296 PNLDC1Q8NA58 520 aaKnown RBP13.97□□□□□ -0.17
LTBR-215ENST00000546296 TMEM185AQ8NFB2 350 aa13.97□□□□□ -0.17
LTBR-215ENST00000546296 SDSLQ96GA7 329 aa13.97□□□□□ -0.17
LTBR-215ENST00000546296 NUDT16L1Q9BRJ7 211 aaKnown RBP13.97□□□□□ -0.17
LTBR-215ENST00000546296 MRI1Q9BV20 369 aa13.97□□□□□ -0.17
LTBR-215ENST00000546296 RBFOX1Q9NWB1 397 aaKnown RBP13.97□□□□□ -0.17
LTBR-215ENST00000546296 SLC25A10Q9UBX3 287 aaPredicted RBP13.97□□□□□ -0.17
LTBR-215ENST00000546296 GLS2Q9UI32 602 aa13.97□□□□□ -0.17
LTBR-215ENST00000546296 ZNF222Q9UK12 451 aa13.97□□□□□ -0.17
LTBR-215ENST00000546296 FOXJ3Q9UPW0 622 aa13.97□□□□□ -0.17
LTBR-215ENST00000546296 INSIG2Q9Y5U4 225 aa13.97□□□□□ -0.17
LTBR-215ENST00000546296 ABCA2Q9BZC7 2435 aa13.97□□□□□ -0.17
LTBR-215ENST00000546296 IGKV1-12A0A0C4DH73 117 aa13.96□□□□□ -0.17
LTBR-215ENST00000546296 KIR2DS1A0A191URI9 304 aa13.96□□□□□ -0.17
LTBR-215ENST00000546296 GABRPO00591 440 aa13.96□□□□□ -0.17
LTBR-215ENST00000546296 GPR37O15354 613 aa13.96□□□□□ -0.17
LTBR-215ENST00000546296 PIN1P1O15428 100 aa13.96□□□□□ -0.17
LTBR-215ENST00000546296 ENSAO43768 121 aaKnown RBP13.96□□□□□ -0.17
LTBR-215ENST00000546296 IGKV1D-12P01611 117 aa13.96□□□□□ -0.17
LTBR-215ENST00000546296 MAS1P04201 325 aa13.96□□□□□ -0.17
LTBR-215ENST00000546296 SELLP14151 372 aa13.96□□□□□ -0.17
LTBR-215ENST00000546296 PRKACAP17612 351 aa13.96□□□□□ -0.17
LTBR-215ENST00000546296 FSTP19883 344 aa13.96□□□□□ -0.17
LTBR-215ENST00000546296 PSMA1P25786 263 aaKnown RBP13.96□□□□□ -0.17
LTBR-215ENST00000546296 CEBPDP49716 269 aaPredicted RBP13.96□□□□□ -0.17
LTBR-215ENST00000546296 SNU13P55769 128 aaKnown RBP13.96□□□□□ -0.17
LTBR-215ENST00000546296 ZP1P60852 638 aa13.96□□□□□ -0.17
LTBR-215ENST00000546296 RPS25P62851 125 aaKnown RBP13.96□□□□□ -0.17
LTBR-215ENST00000546296 INSL4Q14641 139 aa13.96□□□□□ -0.17
LTBR-215ENST00000546296 DGUOKQ16854 277 aa13.96□□□□□ -0.17
LTBR-215ENST00000546296 KCTD21Q4G0X4 260 aa13.96□□□□□ -0.17
LTBR-215ENST00000546296 PHC2Q8IXK0 858 aa13.96□□□□□ -0.17
LTBR-215ENST00000546296 FGFRL1Q8N441 504 aa13.96□□□□□ -0.17
LTBR-215ENST00000546296 ZNF561Q8N587 486 aa13.96□□□□□ -0.17
LTBR-215ENST00000546296 TEX29Q8N6K0 151 aa13.96□□□□□ -0.17
LTBR-215ENST00000546296 CD177Q8N6Q3 437 aa13.96□□□□□ -0.17
LTBR-215ENST00000546296 ZNRF1Q8ND25 227 aa13.96□□□□□ -0.17
LTBR-215ENST00000546296 H1FXQ92522 213 aaKnown RBP13.96□□□□□ -0.17
LTBR-215ENST00000546296 S100A13Q99584 98 aa13.96□□□□□ -0.17
LTBR-215ENST00000546296 TMPRSS13Q9BYE2 586 aa13.96□□□□□ -0.17
LTBR-215ENST00000546296 TCF7L1Q9HCS4 588 aa13.96□□□□□ -0.17
LTBR-215ENST00000546296 ING4Q9UNL4 249 aa13.96□□□□□ -0.17
LTBR-215ENST00000546296 AUP1Q9Y679 476 aa13.96□□□□□ -0.17
LTBR-215ENST00000546296 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.96□□□□□ -0.181e-9■■■□□ 14.6
LTBR-215ENST00000546296 SONP18583 2426 aaKnown RBP13.95□□□□□ -0.18
LTBR-215ENST00000546296 C22orf46C9J442 243 aa13.95□□□□□ -0.18
LTBR-215ENST00000546296 KDM4BO94953 1096 aa13.95□□□□□ -0.18
LTBR-215ENST00000546296 SRD5A1P18405 259 aa13.95□□□□□ -0.18
LTBR-215ENST00000546296 PTGFRP43088 359 aa13.95□□□□□ -0.18
LTBR-215ENST00000546296 RSU1Q15404 277 aa13.95□□□□□ -0.18
LTBR-215ENST00000546296 C11orf91Q3C1V1 193 aa13.95□□□□□ -0.18
LTBR-215ENST00000546296 CRIP3Q6Q6R5 217 aa13.95□□□□□ -0.18
LTBR-215ENST00000546296 JAGN1Q8N5M9 183 aa13.95□□□□□ -0.18
LTBR-215ENST00000546296 FCGR1BQ92637 280 aa13.95□□□□□ -0.18
LTBR-215ENST00000546296 NKX3-1Q99801 234 aaPredicted RBP13.95□□□□□ -0.18
LTBR-215ENST00000546296 RHOFQ9HBH0 211 aa13.95□□□□□ -0.18
LTBR-215ENST00000546296 HMG20AQ9NP66 347 aa13.95□□□□□ -0.18
LTBR-215ENST00000546296 GSTK1Q9Y2Q3 226 aa13.95□□□□□ -0.18
LTBR-215ENST00000546296 MAB21L2Q9Y586 359 aa13.95□□□□□ -0.18
LTBR-215ENST00000546296 MALRD1Q5VYJ5 2156 aa13.95□□□□□ -0.18
LTBR-215ENST00000546296 MEGF11A6BM72 1044 aa13.94□□□□□ -0.18
LTBR-215ENST00000546296 FCN3O75636 299 aa13.94□□□□□ -0.18
LTBR-215ENST00000546296 RGS9O75916 674 aaPredicted RBP13.94□□□□□ -0.18
LTBR-215ENST00000546296 LIPFP07098 398 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms