RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 OR4P4Q8NGL7 312 aa13.3□□□□□ -0.28
CPSF7-225ENST00000545934 TMEM133Q9H2Q1 129 aa13.3□□□□□ -0.28
CPSF7-225ENST00000545934 SEBOXQ9HB31 216 aaPredicted RBP13.3□□□□□ -0.28
CPSF7-225ENST00000545934 MTCH1Q9NZJ7 389 aa13.3□□□□□ -0.28
CPSF7-225ENST00000545934 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.3□□□□□ -0.28
CPSF7-225ENST00000545934 LINC00312Q9Y6C7 94 aa13.3□□□□□ -0.28
CPSF7-225ENST00000545934 AMY1AP04745 511 aa13.29□□□□□ -0.28
CPSF7-225ENST00000545934 AMY2AP04746 511 aa13.29□□□□□ -0.28
CPSF7-225ENST00000545934 RIDAP52758 137 aaKnown RBP13.29□□□□□ -0.28
CPSF7-225ENST00000545934 RPS7P62081 194 aaKnown RBP13.29□□□□□ -0.28
CPSF7-225ENST00000545934 MS4A2Q01362 244 aa13.29□□□□□ -0.28
CPSF7-225ENST00000545934 TRIM25Q14258 630 aaKnown RBP13.29□□□□□ -0.28
CPSF7-225ENST00000545934 C10orf99Q6UWK7 81 aa13.29□□□□□ -0.28
CPSF7-225ENST00000545934 ETV3LQ6ZN32 361 aa13.29□□□□□ -0.28
CPSF7-225ENST00000545934 DHFR2Q86XF0 187 aa13.29□□□□□ -0.28
CPSF7-225ENST00000545934 ELMOD2Q8IZ81 293 aa13.29□□□□□ -0.28
CPSF7-225ENST00000545934 ZNF676Q8N7Q3 588 aa13.29□□□□□ -0.28
CPSF7-225ENST00000545934 ASB17Q8WXJ9 295 aa13.29□□□□□ -0.28
CPSF7-225ENST00000545934 SNX22Q96L94 193 aa13.29□□□□□ -0.28
CPSF7-225ENST00000545934 CLEC7AQ9BXN2 247 aa13.29□□□□□ -0.28
CPSF7-225ENST00000545934 MOB1AQ9H8S9 216 aa13.29□□□□□ -0.28
CPSF7-225ENST00000545934 SLC25A19Q9HC21 320 aa13.29□□□□□ -0.28
CPSF7-225ENST00000545934 TMEM14AQ9Y6G1 99 aa13.29□□□□□ -0.28
CPSF7-225ENST00000545934 hADV38S2A0JD32 116 aa13.28□□□□□ -0.28
CPSF7-225ENST00000545934 MMP23AO75900 390 aa13.28□□□□□ -0.28
CPSF7-225ENST00000545934 DNAJC8O75937 253 aaPredicted RBP13.28□□□□□ -0.28
CPSF7-225ENST00000545934 MRPL3P09001 348 aaKnown RBP13.28□□□□□ -0.28
CPSF7-225ENST00000545934 RAP2AP10114 183 aa13.28□□□□□ -0.28
CPSF7-225ENST00000545934 CCL1P22362 96 aa13.28□□□□□ -0.28
CPSF7-225ENST00000545934 HTR1DP28221 377 aa13.28□□□□□ -0.28
CPSF7-225ENST00000545934 HOXD3P31249 432 aaPredicted RBP13.28□□□□□ -0.28
CPSF7-225ENST00000545934 CD69Q07108 199 aa13.28□□□□□ -0.28
CPSF7-225ENST00000545934 IL18R1Q13478 541 aa13.28□□□□□ -0.28
CPSF7-225ENST00000545934 ZBTB49Q6ZSB9 765 aa13.28□□□□□ -0.28
CPSF7-225ENST00000545934 ARHGAP24Q8N264 748 aa13.28□□□□□ -0.28
CPSF7-225ENST00000545934 OR52N4Q8NGI2 321 aa13.28□□□□□ -0.28
CPSF7-225ENST00000545934 NDNFQ8TB73 568 aa13.28□□□□□ -0.28
CPSF7-225ENST00000545934 TTTY10Q9BZA0 68 aa13.28□□□□□ -0.28
CPSF7-225ENST00000545934 MED4Q9NPJ6 270 aa13.28□□□□□ -0.28
CPSF7-225ENST00000545934 R4GMQ9 66 aa13.28□□□□□ -0.28
CPSF7-225ENST00000545934 DYNC2H1Q8NCM8 4307 aaKnown RBP13.27□□□□□ -0.28
CPSF7-225ENST00000545934 IGKV1-27A0A075B6S5 117 aa13.27□□□□□ -0.29
CPSF7-225ENST00000545934 A6NIN4 97 aa13.27□□□□□ -0.29
CPSF7-225ENST00000545934 E9PQ18 207 aa13.27□□□□□ -0.29
CPSF7-225ENST00000545934 LOC110117498-PIK3R3F6TDL0 507 aa13.27□□□□□ -0.29
CPSF7-225ENST00000545934 H3BUI4 141 aa13.27□□□□□ -0.29
CPSF7-225ENST00000545934 CST1P01037 141 aa13.27□□□□□ -0.29
CPSF7-225ENST00000545934 LPLP06858 475 aa13.27□□□□□ -0.29
CPSF7-225ENST00000545934 CD24P25063 80 aa13.27□□□□□ -0.29
CPSF7-225ENST00000545934 HSP90B2PQ58FF3 399 aa13.27□□□□□ -0.29
CPSF7-225ENST00000545934 TMEM236Q5W0B7 351 aa13.27□□□□□ -0.29
CPSF7-225ENST00000545934 TPRX1Q8N7U7 411 aa13.27□□□□□ -0.29
CPSF7-225ENST00000545934 OR4X2Q8NGF9 303 aa13.27□□□□□ -0.29
CPSF7-225ENST00000545934 AKR1E2Q96JD6 320 aa13.27□□□□□ -0.29
CPSF7-225ENST00000545934 CEP19Q96LK0 163 aa13.27□□□□□ -0.29
CPSF7-225ENST00000545934 RBM14Q96PK6 669 aaKnown RBP13.27□□□□□ -0.29
CPSF7-225ENST00000545934 SLC25A33Q9BSK2 321 aa13.27□□□□□ -0.29
CPSF7-225ENST00000545934 CADM1Q9BY67 442 aaKnown RBP13.27□□□□□ -0.29
CPSF7-225ENST00000545934 OR52A1Q9UKL2 312 aa13.27□□□□□ -0.29
CPSF7-225ENST00000545934 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.27□□□□□ -0.295e-8■■■■■ 34.6
CPSF7-225ENST00000545934 HHLA2Q9UM44 414 aa13.27□□□□□ -0.29
CPSF7-225ENST00000545934 DNAH7Q8WXX0 4024 aa13.27□□□□□ -0.29
CPSF7-225ENST00000545934 OR2F2O95006 317 aa13.26□□□□□ -0.29
CPSF7-225ENST00000545934 IGLV1-47P01700 117 aa13.26□□□□□ -0.29
CPSF7-225ENST00000545934 IGHA1P01876 353 aa13.26□□□□□ -0.29
CPSF7-225ENST00000545934 BDH1Q02338 343 aa13.26□□□□□ -0.29
CPSF7-225ENST00000545934 EDDM3AQ14507 147 aa13.26□□□□□ -0.29
CPSF7-225ENST00000545934 ABCA11PQ4W5N1 156 aa13.26□□□□□ -0.29
CPSF7-225ENST00000545934 BCL2L15Q5TBC7 163 aa13.26□□□□□ -0.29
CPSF7-225ENST00000545934 MRPL41Q8IXM3 137 aaKnown RBP13.26□□□□□ -0.29
CPSF7-225ENST00000545934 APOL4Q9BPW4 351 aa13.26□□□□□ -0.29
CPSF7-225ENST00000545934 CHID1Q9BWS9 393 aa13.26□□□□□ -0.29
CPSF7-225ENST00000545934 GPR61Q9BZJ8 451 aa13.26□□□□□ -0.29
CPSF7-225ENST00000545934 FAM107BQ9H098 131 aa13.26□□□□□ -0.29
CPSF7-225ENST00000545934 DPM3Q9P2X0 92 aa13.26□□□□□ -0.29
CPSF7-225ENST00000545934 IKZF2Q9UKS7 526 aa13.26□□□□□ -0.29
CPSF7-225ENST00000545934 FAM230AA0A1W2PPH8 454 aa13.25□□□□□ -0.29
CPSF7-225ENST00000545934 MAGEB4O15481 346 aaPredicted RBP13.25□□□□□ -0.29
CPSF7-225ENST00000545934 PSPNO60542 156 aa13.25□□□□□ -0.29
CPSF7-225ENST00000545934 CLIC3O95833 236 aa13.25□□□□□ -0.29
CPSF7-225ENST00000545934 PEX2P28328 305 aa13.25□□□□□ -0.29
CPSF7-225ENST00000545934 BRS3P32247 399 aa13.25□□□□□ -0.29
CPSF7-225ENST00000545934 ESRRGP62508 458 aa13.25□□□□□ -0.29
CPSF7-225ENST00000545934 UBE2V2Q15819 145 aa13.25□□□□□ -0.29
CPSF7-225ENST00000545934 ZNF322Q6U7Q0 402 aaPredicted RBP13.25□□□□□ -0.29
CPSF7-225ENST00000545934 BAIAP2L2Q6UXY1 529 aa13.25□□□□□ -0.29
CPSF7-225ENST00000545934 ADGRG5Q8IZF4 528 aa13.25□□□□□ -0.29
CPSF7-225ENST00000545934 HS3ST5Q8IZT8 346 aa13.25□□□□□ -0.29
CPSF7-225ENST00000545934 TRMT10AQ8TBZ6 339 aaKnown RBP13.25□□□□□ -0.29
CPSF7-225ENST00000545934 UBE2J1Q9Y385 318 aaPredicted RBP13.25□□□□□ -0.29
CPSF7-225ENST00000545934 SNX5Q9Y5X3 404 aa13.25□□□□□ -0.29
CPSF7-225ENST00000545934 SH2D7A6NKC9 451 aaPredicted RBP13.24□□□□□ -0.29
CPSF7-225ENST00000545934 HAND1O96004 215 aa13.24□□□□□ -0.29
CPSF7-225ENST00000545934 ERP29P30040 261 aaKnown RBP13.24□□□□□ -0.29
CPSF7-225ENST00000545934 CXCR4P61073 352 aa13.24□□□□□ -0.29
CPSF7-225ENST00000545934 ZNF91Q05481 1191 aa13.24□□□□□ -0.29
CPSF7-225ENST00000545934 GRK1Q15835 563 aa13.24□□□□□ -0.29
CPSF7-225ENST00000545934 SNAPC1Q16533 368 aa13.24□□□□□ -0.29
CPSF7-225ENST00000545934 PLEKHG7Q6ZR37 379 aa13.24□□□□□ -0.29
CPSF7-225ENST00000545934 RTN4RL2Q86UN3 420 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms