RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 LRP5LA4QPB2 252 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 OR2W5A6NFC9 320 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 B4DEV8 164 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 WRBO00258 174 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 LINC01565O15544 149 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 GMFGO60234 142 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 RAD51DO75771 328 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 PIAS2O75928 621 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 FARS2O95363 451 aaKnown RBP5.64□□□□□ -1.51
SNHG1-225ENST00000545920 F10P00742 488 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 SERPINA5P05154 406 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 QDPRP09417 244 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 WNT2P09544 360 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 CTXN2P0C2S0 81 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 OR5H8P0DN80 308 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 RAB5AP20339 215 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 GLRA1P23415 457 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 CD80P33681 288 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 PTGER4P35408 488 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 CSNK1A1P48729 337 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 CAMLGP49069 296 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 MTCP1P56278 107 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 MRPS34P82930 218 aaKnown RBP5.64□□□□□ -1.51
SNHG1-225ENST00000545920 TMEM187Q14656 261 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 CLINT1Q14677 625 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 SHBQ15464 509 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 GUK1Q16774 197 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 NRN1LQ496H8 165 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 SLC22A6Q4U2R8 563 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 ABCA11PQ4W5N1 156 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 RPUSD3Q6P087 351 aaKnown RBP5.64□□□□□ -1.51
SNHG1-225ENST00000545920 TMPPEQ6ZT21 453 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 FAM57BQ71RH2 274 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 SFTPA2Q8IWL1 248 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 OR2M3Q8NG83 312 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 OR13D1Q8NGV5 346 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 POC1BQ8TC44 478 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 IL22RA2Q969J5 263 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 RBMXL1Q96E39 390 aaKnown RBP5.64□□□□□ -1.51
SNHG1-225ENST00000545920 ZC3H10Q96K80 434 aaKnown RBP5.64□□□□□ -1.51
SNHG1-225ENST00000545920 C18orf12Q96KH6 178 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 ZNF2Q9BSG1 426 aaPredicted RBP5.64□□□□□ -1.51
SNHG1-225ENST00000545920 ST6GALNAC5Q9BVH7 336 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 METTL7AQ9H8H3 244 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 ZNF286AQ9HBT8 521 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 KCNJ16Q9NPI9 418 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 OR2S2Q9NQN1 319 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 FGF21Q9NSA1 209 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 C19orf12Q9NSK7 152 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 GSKIPQ9P0R6 139 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 DHCR7Q9UBM7 475 aaKnown RBP5.64□□□□□ -1.51
SNHG1-225ENST00000545920 MRPS17Q9Y2R5 130 aaKnown RBP5.64□□□□□ -1.51
SNHG1-225ENST00000545920 GOLGA4Q13439 2230 aaKnown RBP5.64□□□□□ -1.51
SNHG1-225ENST00000545920 PDE4DIPQ5VU43 2346 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 TMEM265A0A087WTH1 108 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 NSG1A0A0A6YYJ2 146 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 TRAV1-1A0A0B4J248 108 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 LOC101059948A0A1B0GTJ6 334 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 FAM230AA0A1W2PPH8 454 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 C7orf77A4D0Y5 90 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 CLEC18AA5D8T8 446 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 STMND1H3BQB6 276 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 M0R135 149 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 AP4M1O00189 453 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 YKT6O15498 198 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 DHHO43323 396 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 PITX3O75364 302 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 IGHV2-5P01817 119 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 HOXB5P09067 269 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 CST2P09228 141 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 SLC25A6P12236 298 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 FCGR2AP12318 317 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 CEACAM1P13688 526 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 ZNF14P17017 642 aaPredicted RBP5.63□□□□□ -1.51
SNHG1-225ENST00000545920 IL11P20809 199 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 CD40P25942 277 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 SFTPDP35247 375 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 EIF2S3P41091 472 aaKnown RBP5.63□□□□□ -1.51
SNHG1-225ENST00000545920 AFF3P51826 1226 aaKnown RBP5.63□□□□□ -1.51
SNHG1-225ENST00000545920 FBXW4P57775 412 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 PCBD1P61457 104 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 SRSF3P84103 164 aaKnown RBP5.63□□□□□ -1.51
SNHG1-225ENST00000545920 H3F3AP84243 136 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 FOXO1Q12778 655 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 MFAP5Q13361 173 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 SMAD4Q13485 552 aaKnown RBP5.63□□□□□ -1.51
SNHG1-225ENST00000545920 RAB35Q15286 201 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 NKAIN1Q4KMZ8 207 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 FAM27BQ5VT28 67 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 TMEM42Q69YG0 159 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 CPEB2Q7Z5Q1 589 aaKnown RBP5.63□□□□□ -1.51
SNHG1-225ENST00000545920 WDR5BQ86VZ2 330 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 SAXO1Q8IYX7 474 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 CLEC18CQ8NCF0 446 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 SMRP1Q8NCR6 262 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 Q8NFD4 153 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 OR51F2Q8NH61 342 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.63□□□□□ -1.51
SNHG1-225ENST00000545920 RTN4IP1Q8WWV3 396 aaPredicted RBP5.63□□□□□ -1.51
SNHG1-225ENST00000545920 GTF3AQ92664 365 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms