RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 FAM90A24PP0C7X0 464 aa14.28□□□□□ -0.12
CHFR-224ENST00000545046 BCL3P20749 454 aa14.28□□□□□ -0.12
CHFR-224ENST00000545046 PER3P56645 1201 aa14.28□□□□□ -0.12
CHFR-224ENST00000545046 GTF3C1Q12789 2109 aa14.28□□□□□ -0.12
CHFR-224ENST00000545046 ELP2Q6IA86 826 aa14.28□□□□□ -0.12
CHFR-224ENST00000545046 OR2T2Q6IF00 324 aa14.28□□□□□ -0.12
CHFR-224ENST00000545046 OR5M8Q8NGP6 311 aa14.28□□□□□ -0.12
CHFR-224ENST00000545046 CASTOR1Q8WTX7 329 aa14.28□□□□□ -0.12
CHFR-224ENST00000545046 CLEC4MQ9H2X3 399 aaPredicted RBP14.28□□□□□ -0.12
CHFR-224ENST00000545046 LHX6Q9UPM6 363 aa14.28□□□□□ -0.12
CHFR-224ENST00000545046 PRSS44E7EML9 344 aa14.27□□□□□ -0.12
CHFR-224ENST00000545046 DUS4LO95620 317 aaKnown RBP14.27□□□□□ -0.12
CHFR-224ENST00000545046 PMELP40967 661 aa14.27□□□□□ -0.12
CHFR-224ENST00000545046 LY6G6FQ5SQ64 297 aa14.27□□□□□ -0.12
CHFR-224ENST00000545046 SPATA46Q5T0L3 261 aa14.27□□□□□ -0.12
CHFR-224ENST00000545046 BRICD5Q6PL45 260 aa14.27□□□□□ -0.12
CHFR-224ENST00000545046 C1orf162Q8NEQ5 155 aaPredicted RBP14.27□□□□□ -0.12
CHFR-224ENST00000545046 IGKV1D-8A0A087WSZ0 117 aa14.27□□□□□ -0.13
CHFR-224ENST00000545046 OR5B21A6NL26 309 aa14.27□□□□□ -0.13
CHFR-224ENST00000545046 HMSDA8MTL9 139 aa14.27□□□□□ -0.13
CHFR-224ENST00000545046 L7N2F9 121 aa14.27□□□□□ -0.13
CHFR-224ENST00000545046 SMPD2O60906 423 aa14.27□□□□□ -0.13
CHFR-224ENST00000545046 OR7C1O76099 320 aaPredicted RBP14.27□□□□□ -0.13
CHFR-224ENST00000545046 FCGR3AP08637 254 aa14.27□□□□□ -0.13
CHFR-224ENST00000545046 ECI1P42126 302 aa14.27□□□□□ -0.13
CHFR-224ENST00000545046 PPP1CBP62140 327 aa14.27□□□□□ -0.13
CHFR-224ENST00000545046 FOXF2Q12947 444 aa14.27□□□□□ -0.13
CHFR-224ENST00000545046 PDCD1Q15116 288 aa14.27□□□□□ -0.13
CHFR-224ENST00000545046 AADACL3Q5VUY0 350 aa14.27□□□□□ -0.13
CHFR-224ENST00000545046 FBXW12Q6X9E4 464 aa14.27□□□□□ -0.13
CHFR-224ENST00000545046 PEG10Q86TG7 708 aaKnown RBP14.27□□□□□ -0.13
CHFR-224ENST00000545046 MYPOPQ86VE0 399 aaPredicted RBP14.27□□□□□ -0.13
CHFR-224ENST00000545046 ZNF573Q86YE8 665 aa14.27□□□□□ -0.13
CHFR-224ENST00000545046 BATF2Q8N1L9 274 aa14.27□□□□□ -0.13
CHFR-224ENST00000545046 C5orf66Q9H5L9 145 aa14.27□□□□□ -0.13
CHFR-224ENST00000545046 ZNF442Q9H7R0 627 aa14.27□□□□□ -0.13
CHFR-224ENST00000545046 DKK4Q9UBT3 224 aa14.27□□□□□ -0.13
CHFR-224ENST00000545046 PROCRQ9UNN8 238 aa14.27□□□□□ -0.13
CHFR-224ENST00000545046 CRYABP02511 175 aaKnown RBP14.26□□□□□ -0.13
CHFR-224ENST00000545046 CBR1P16152 277 aa14.26□□□□□ -0.13
CHFR-224ENST00000545046 COX5AP20674 150 aa14.26□□□□□ -0.13
CHFR-224ENST00000545046 OPRM1P35372 400 aa14.26□□□□□ -0.13
CHFR-224ENST00000545046 FGF12P61328 243 aa14.26□□□□□ -0.13
CHFR-224ENST00000545046 GNG3P63215 75 aa14.26□□□□□ -0.13
CHFR-224ENST00000545046 SURF2Q15527 256 aaPredicted RBP14.26□□□□□ -0.13
CHFR-224ENST00000545046 TSC22D1Q15714 1073 aa14.26□□□□□ -0.13
CHFR-224ENST00000545046 LILRB4Q8NHJ6 448 aa14.26□□□□□ -0.13
CHFR-224ENST00000545046 ELMOD3Q96FG2 381 aa14.26□□□□□ -0.13
CHFR-224ENST00000545046 BOD1Q96IK1 185 aa14.26□□□□□ -0.13
CHFR-224ENST00000545046 PDCD10Q9BUL8 212 aa14.26□□□□□ -0.13
CHFR-224ENST00000545046 NECAP2Q9NVZ3 263 aa14.26□□□□□ -0.13
CHFR-224ENST00000545046 OR5H14A6NHG9 310 aa14.26□□□□□ -0.13
CHFR-224ENST00000545046 SLC34A2O95436 690 aa14.26□□□□□ -0.13
CHFR-224ENST00000545046 PDGFAP04085 211 aa14.26□□□□□ -0.13
CHFR-224ENST00000545046 PGAM2P15259 253 aa14.26□□□□□ -0.13
CHFR-224ENST00000545046 HLA-GP17693 338 aa14.26□□□□□ -0.13
CHFR-224ENST00000545046 CA6P23280 308 aa14.26□□□□□ -0.13
CHFR-224ENST00000545046 SEC61A1P61619 476 aaKnown RBP14.26□□□□□ -0.13
CHFR-224ENST00000545046 TEX261Q6UWH6 196 aa14.26□□□□□ -0.13
CHFR-224ENST00000545046 KCTD9Q7L273 389 aa14.26□□□□□ -0.13
CHFR-224ENST00000545046 RBMXL3Q8N7X1 1067 aaKnown RBP14.26□□□□□ -0.13
CHFR-224ENST00000545046 DPCDQ9BVM2 203 aaPredicted RBP14.26□□□□□ -0.13
CHFR-224ENST00000545046 MTCH1Q9NZJ7 389 aa14.26□□□□□ -0.13
CHFR-224ENST00000545046 U3KQ87 197 aa14.26□□□□□ -0.13
CHFR-224ENST00000545046 PRRC2CQ9Y520 2896 aaKnown RBP14.25□□□□□ -0.13
CHFR-224ENST00000545046 LOC400499M0QZD8 3231 aa14.25□□□□□ -0.13
CHFR-224ENST00000545046 FXYD6-FXYD2A0A087WZ82 144 aa14.25□□□□□ -0.13
CHFR-224ENST00000545046 MBD3L4A6NDZ8 208 aaPredicted RBP14.25□□□□□ -0.13
CHFR-224ENST00000545046 MBD3L3A6NE82 208 aaPredicted RBP14.25□□□□□ -0.13
CHFR-224ENST00000545046 MBD3L5A6NJ08 208 aaPredicted RBP14.25□□□□□ -0.13
CHFR-224ENST00000545046 MCRIP1C9JLW8 97 aa14.25□□□□□ -0.13
CHFR-224ENST00000545046 TPD52L2O43399 206 aaKnown RBP14.25□□□□□ -0.13
CHFR-224ENST00000545046 LILRA1O75019 489 aa14.25□□□□□ -0.13
CHFR-224ENST00000545046 NOS1APO75052 506 aaPredicted RBP14.25□□□□□ -0.13
CHFR-224ENST00000545046 PPP3CBP16298 524 aa14.25□□□□□ -0.13
CHFR-224ENST00000545046 S100A1P23297 94 aa14.25□□□□□ -0.13
CHFR-224ENST00000545046 SRSF4Q08170 494 aaKnown RBP14.25□□□□□ -0.13
CHFR-224ENST00000545046 FGL1Q08830 312 aa14.25□□□□□ -0.13
CHFR-224ENST00000545046 FOXC1Q12948 553 aa14.25□□□□□ -0.13
CHFR-224ENST00000545046 BAMBIQ13145 260 aa14.25□□□□□ -0.13
CHFR-224ENST00000545046 NHLRC3Q5JS37 347 aa14.25□□□□□ -0.13
CHFR-224ENST00000545046 TMEM211Q6ICI0 200 aa14.25□□□□□ -0.13
CHFR-224ENST00000545046 HAGHLQ6PII5 290 aaPredicted RBP14.25□□□□□ -0.13
CHFR-224ENST00000545046 MBD3L2Q8NHZ7 208 aaPredicted RBP14.25□□□□□ -0.13
CHFR-224ENST00000545046 DYRK2Q92630 601 aa14.25□□□□□ -0.13
CHFR-224ENST00000545046 CCDC120Q96HB5 630 aa14.25□□□□□ -0.13
CHFR-224ENST00000545046 ZNF2Q9BSG1 426 aaPredicted RBP14.25□□□□□ -0.13
CHFR-224ENST00000545046 RTBDNQ9BSG5 229 aaPredicted RBP14.25□□□□□ -0.13
CHFR-224ENST00000545046 FXYD6Q9H0Q3 95 aa14.25□□□□□ -0.13
CHFR-224ENST00000545046 HEXA-AS1Q9H8Q6 139 aa14.25□□□□□ -0.13
CHFR-224ENST00000545046 ZNF286AQ9HBT8 521 aa14.25□□□□□ -0.13
CHFR-224ENST00000545046 C14orf166Q9Y224 244 aaKnown RBP14.25□□□□□ -0.13
CHFR-224ENST00000545046 MKRN2OSH3BPM6 223 aa14.24□□□□□ -0.13
CHFR-224ENST00000545046 M0R233 179 aa14.24□□□□□ -0.13
CHFR-224ENST00000545046 CXCL2P19875 107 aa14.24□□□□□ -0.13
CHFR-224ENST00000545046 HTR2BP41595 481 aa14.24□□□□□ -0.13
CHFR-224ENST00000545046 UCP2P55851 309 aa14.24□□□□□ -0.13
CHFR-224ENST00000545046 SORDQ00796 357 aa14.24□□□□□ -0.13
CHFR-224ENST00000545046 ESPL1Q14674 2120 aa14.24□□□□□ -0.13
CHFR-224ENST00000545046 OPCMLQ14982 345 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms