RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 CCDC80Q76M96 950 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 PATL1Q86TB9 770 aaKnown RBP3.18□□□□□ -1.9
SNHG1-220ENST00000544550 ADCK1Q86TW2 530 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 OAFQ86UD1 273 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 EGFL6Q8IUX8 553 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 ZNF561Q8N587 486 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 FAM71E2Q8N5Q1 922 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 LRRC75AQ8NAA5 344 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 C11orf65Q8NCR3 313 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 ZNRF1Q8ND25 227 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 OR2T27Q8NH04 317 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 BCAS4Q8TDM0 211 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 C2CD4CQ8TF44 421 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 TMEM255BQ8WV15 326 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 C4orf3Q8WVX3 66 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 GTF2H4Q92759 462 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 CREB3L1Q96BA8 519 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 BPIFA2Q96DR5 249 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 SEH1LQ96EE3 360 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 RNF125Q96EQ8 232 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 SDSLQ96GA7 329 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 ZNF570Q96NI8 536 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 DUX3Q96PT4 197 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 RTL8AQ9BWD3 113 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 CTDSP1Q9GZU7 261 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 WDR13Q9H1Z4 485 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 SYT4Q9H2B2 425 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 RABEP2Q9H5N1 569 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 RERGLQ9H628 205 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 SP140LQ9H930 580 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 NMNAT1Q9HAN9 279 aaPredicted RBP3.18□□□□□ -1.9
SNHG1-220ENST00000544550 ELL3Q9HB65 397 aaPredicted RBP3.18□□□□□ -1.9
SNHG1-220ENST00000544550 ISYNA1Q9NPH2 558 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 PAPOLBQ9NRJ5 636 aaKnown RBP3.18□□□□□ -1.9
SNHG1-220ENST00000544550 RASL12Q9NYN1 266 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 MOB4Q9Y3A3 225 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 GMEB1Q9Y692 573 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 LHFPL6Q9Y693 200 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 HSPE1-MOB4S4R3N1 261 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 IGKV1D-17A0A075B6S4 117 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 OR6C68A6NDL8 312 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 TRIM64CA6NLI5 447 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 LINC01548A6NM66 108 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 TRPC5OSA6NMA1 111 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 OOSP1A8MZH6 123 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 IMPA2O14732 288 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 SLC22A2O15244 555 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 FGF16O43320 207 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 AKR7A2O43488 359 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 SAP30O75446 220 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 ZNF728P0DKX0 622 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 PSG2P11465 335 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 SPNP16150 400 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 GPX2P18283 190 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 CEACAM3P40198 252 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 MNDAP41218 407 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 KIR3DL2P43630 455 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 GPR12P47775 334 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 ST3GAL3Q11203 375 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 KRR1Q13601 381 aaKnown RBP3.17□□□□□ -1.9
SNHG1-220ENST00000544550 ZNF273Q14593 569 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 SRSF7Q16629 238 aaKnown RBP eCLIP3.17□□□□□ -1.9
SNHG1-220ENST00000544550 PNLIPRP3Q17RR3 467 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 DEFB136Q30KP8 78 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 SMIM21Q3B7S5 101 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 SNAI3Q3KNW1 292 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 GLYATL3Q5SZD4 288 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 RNLSQ5VYX0 342 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 GPR139Q6DWJ6 353 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 SLC18B1Q6NT16 456 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 CORO6Q6QEF8 472 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 KCTD8Q6ZWB6 473 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 SLC35E3Q7Z769 313 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 WDR86Q86TI4 376 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 NAA40Q86UY6 237 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 RBM45Q8IUH3 476 aaKnown RBP3.17□□□□□ -1.9
SNHG1-220ENST00000544550 NKAIN4Q8IVV8 208 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 PGAM4Q8N0Y7 254 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 OR6V1Q8N148 313 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 STPG2Q8N412 459 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 DPP10Q8N608 796 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 CSNK2A3Q8NEV1 391 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 OR11H1Q8NG94 326 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 GPR32P1Q8NGA4 272 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 OR51A7Q8NH64 312 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 OR2AE1Q8NHA4 323 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 ZNF671Q8TAW3 534 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 ZNF596Q8TC21 504 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 LZICQ8WZA0 190 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 ST6GALNAC5Q9BVH7 336 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 PAPOLGQ9BWT3 736 aaKnown RBP3.17□□□□□ -1.9
SNHG1-220ENST00000544550 CLEC7AQ9BXN2 247 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 SDR39U1Q9NRG7 319 aaPredicted RBP3.17□□□□□ -1.9
SNHG1-220ENST00000544550 ADA2Q9NZK5 511 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 DPM3Q9P2X0 92 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 RIMS3Q9UJD0 308 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 HAO1Q9UJM8 370 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 ZNF222Q9UK12 451 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 MPC1Q9Y5U8 109 aa3.17□□□□□ -1.9
SNHG1-220ENST00000544550 TRAV27A0A087WT01 109 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms