RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 COL10A1Q03692 680 aa11.12□□□□□ -0.63
SMG8-202ENST00000543872 GNMTQ14749 295 aa11.12□□□□□ -0.63
SMG8-202ENST00000543872 CST6Q15828 149 aa11.12□□□□□ -0.63
SMG8-202ENST00000543872 GPR157Q5UAW9 335 aa11.12□□□□□ -0.63
SMG8-202ENST00000543872 C16orf54Q6UWD8 224 aa11.12□□□□□ -0.63
SMG8-202ENST00000543872 TMEM183AQ8IXX5 376 aa11.12□□□□□ -0.63
SMG8-202ENST00000543872 FLVCR1-AS1Q8TAF5 88 aa11.12□□□□□ -0.63
SMG8-202ENST00000543872 TMEM37Q8WXS4 190 aa11.12□□□□□ -0.63
SMG8-202ENST00000543872 SLAMF6Q96DU3 332 aa11.12□□□□□ -0.63
SMG8-202ENST00000543872 CCDC74BQ96LY2 380 aa11.12□□□□□ -0.63
SMG8-202ENST00000543872 EMC6Q9BV81 110 aa11.12□□□□□ -0.63
SMG8-202ENST00000543872 TMEM106CQ9BVX2 250 aa11.12□□□□□ -0.63
SMG8-202ENST00000543872 PARD6GQ9BYG4 376 aaPredicted RBP11.12□□□□□ -0.63
SMG8-202ENST00000543872 HRASLS2Q9NWW9 162 aa11.12□□□□□ -0.63
SMG8-202ENST00000543872 MED29Q9NX70 200 aa11.12□□□□□ -0.63
SMG8-202ENST00000543872 SLC17A4Q9Y2C5 497 aa11.12□□□□□ -0.63
SMG8-202ENST00000543872 RP1P56715 2156 aa11.12□□□□□ -0.63
SMG8-202ENST00000543872 CHD3Q12873 2000 aaKnown RBP11.12□□□□□ -0.63
SMG8-202ENST00000543872 ZNF850A8MQ14 1090 aa11.12□□□□□ -0.63
SMG8-202ENST00000543872 B4E171 279 aa11.12□□□□□ -0.63
SMG8-202ENST00000543872 TGOLN2O43493 480 aa11.12□□□□□ -0.63
SMG8-202ENST00000543872 FOLR1P15328 257 aa11.12□□□□□ -0.63
SMG8-202ENST00000543872 GPR3P46089 330 aa11.12□□□□□ -0.63
SMG8-202ENST00000543872 RRADP55042 308 aa11.12□□□□□ -0.63
SMG8-202ENST00000543872 EWSR1Q01844 656 aaKnown RBP eCLIP11.12□□□□□ -0.63
SMG8-202ENST00000543872 C6orf201Q7Z4U5 140 aa11.12□□□□□ -0.63
SMG8-202ENST00000543872 FAM185AQ8N0U4 392 aa11.12□□□□□ -0.63
SMG8-202ENST00000543872 OR1P1Q8NH06 330 aa11.12□□□□□ -0.63
SMG8-202ENST00000543872 HIST1H2AAQ96QV6 131 aa11.12□□□□□ -0.63
SMG8-202ENST00000543872 OR8D2Q9GZM6 311 aa11.12□□□□□ -0.63
SMG8-202ENST00000543872 NXF5Q9H1B4 397 aaKnown RBP11.12□□□□□ -0.63
SMG8-202ENST00000543872 KIAA1456Q9P272 454 aa11.12□□□□□ -0.63
SMG8-202ENST00000543872 SEMA5BQ9P283 1151 aa11.12□□□□□ -0.63
SMG8-202ENST00000543872 HPNP05981 417 aa11.11□□□□□ -0.63
SMG8-202ENST00000543872 PAX5Q02548 391 aa11.11□□□□□ -0.63
SMG8-202ENST00000543872 PMS2P11Q13670 270 aa11.11□□□□□ -0.63
SMG8-202ENST00000543872 ARMC6Q6NXE6 501 aa11.11□□□□□ -0.63
SMG8-202ENST00000543872 OR1E3Q8WZA6 343 aa11.11□□□□□ -0.63
SMG8-202ENST00000543872 HOXB13Q92826 284 aaPredicted RBP11.11□□□□□ -0.63
SMG8-202ENST00000543872 FAAP24Q9BTP7 215 aa11.11□□□□□ -0.63
SMG8-202ENST00000543872 PNO1Q9NRX1 252 aaKnown RBP11.11□□□□□ -0.63
SMG8-202ENST00000543872 LRFN1Q9P244 771 aa11.11□□□□□ -0.63
SMG8-202ENST00000543872 H0Y8X5 98 aa11.11□□□□□ -0.63
SMG8-202ENST00000543872 H3F3AP84243 136 aa11.11□□□□□ -0.63
SMG8-202ENST00000543872 HNF4GQ14541 408 aa11.11□□□□□ -0.63
SMG8-202ENST00000543872 SGCBQ16585 318 aa11.11□□□□□ -0.63
SMG8-202ENST00000543872 TAF9Q16594 264 aa11.11□□□□□ -0.63
SMG8-202ENST00000543872 ZNF66Q6ZN08 573 aa11.11□□□□□ -0.63
SMG8-202ENST00000543872 OR14L1PQ8NHC6 308 aa11.11□□□□□ -0.63
SMG8-202ENST00000543872 RTN4IP1Q8WWV3 396 aaPredicted RBP11.11□□□□□ -0.63
SMG8-202ENST00000543872 LAMP3Q9UQV4 416 aa11.11□□□□□ -0.63
SMG8-202ENST00000543872 PHF3Q92576 2039 aaKnown RBP11.11□□□□□ -0.63
SMG8-202ENST00000543872 PRSS38A1L453 326 aa11.11□□□□□ -0.63
SMG8-202ENST00000543872 GP1BBP13224 206 aa11.11□□□□□ -0.63
SMG8-202ENST00000543872 S100A7P31151 101 aa11.11□□□□□ -0.63
SMG8-202ENST00000543872 AKT2P31751 481 aa11.11□□□□□ -0.63
SMG8-202ENST00000543872 OR3A1P47881 315 aa11.11□□□□□ -0.63
SMG8-202ENST00000543872 MMP16P51512 607 aa11.11□□□□□ -0.63
SMG8-202ENST00000543872 GPM6BQ13491 265 aa11.11□□□□□ -0.63
SMG8-202ENST00000543872 BTNL3Q6UXE8 466 aa11.11□□□□□ -0.63
SMG8-202ENST00000543872 OR5AS1Q8N127 324 aa11.11□□□□□ -0.63
SMG8-202ENST00000543872 SHDQ96IW2 340 aa11.11□□□□□ -0.63
SMG8-202ENST00000543872 FAM60AQ9NP50 221 aa11.11□□□□□ -0.63
SMG8-202ENST00000543872 GPR84Q9NQS5 396 aa11.11□□□□□ -0.63
SMG8-202ENST00000543872 CRYM-AS1A6NIL9 109 aa11.1□□□□□ -0.63
SMG8-202ENST00000543872 SIAH2O43255 324 aa11.1□□□□□ -0.63
SMG8-202ENST00000543872 METTL15P1P0C7V9 234 aa11.1□□□□□ -0.63
SMG8-202ENST00000543872 IDH3GP51553 393 aaPredicted RBP11.1□□□□□ -0.63
SMG8-202ENST00000543872 P2RY6Q15077 328 aa11.1□□□□□ -0.63
SMG8-202ENST00000543872 MPV17LQ2QL34 196 aa11.1□□□□□ -0.63
SMG8-202ENST00000543872 SNIP1Q8TAD8 396 aaKnown RBP11.1□□□□□ -0.63
SMG8-202ENST00000543872 MRGPRX4Q96LA9 322 aa11.1□□□□□ -0.63
SMG8-202ENST00000543872 C1orf147Q96MC9 270 aaPredicted RBP11.1□□□□□ -0.63
SMG8-202ENST00000543872 NUDT22Q9BRQ3 303 aa11.1□□□□□ -0.63
SMG8-202ENST00000543872 ZBP1Q9H171 429 aa11.1□□□□□ -0.63
SMG8-202ENST00000543872 SMDT1Q9H4I9 107 aa11.1□□□□□ -0.63
SMG8-202ENST00000543872 FAM206AQ9NX38 181 aa11.1□□□□□ -0.63
SMG8-202ENST00000543872 DKKL1Q9UK85 242 aa11.1□□□□□ -0.63
SMG8-202ENST00000543872 CDH23Q9H251 3354 aa11.1□□□□□ -0.63
SMG8-202ENST00000543872 A0A1B0GW64 132 aa11.1□□□□□ -0.63
SMG8-202ENST00000543872 NPIPA5E9PKD4 350 aa11.1□□□□□ -0.63
SMG8-202ENST00000543872 TP53I11O14683 189 aa11.1□□□□□ -0.63
SMG8-202ENST00000543872 CD55P08174 381 aa11.1□□□□□ -0.63
SMG8-202ENST00000543872 LMO1P25800 156 aa11.1□□□□□ -0.63
SMG8-202ENST00000543872 TEX38Q6PEX7 206 aa11.1□□□□□ -0.63
SMG8-202ENST00000543872 SLC35E3Q7Z769 313 aa11.1□□□□□ -0.63
SMG8-202ENST00000543872 CMTM1Q8IZ96 169 aa11.1□□□□□ -0.63
SMG8-202ENST00000543872 OR10A7Q8NGE5 316 aa11.1□□□□□ -0.63
SMG8-202ENST00000543872 RHBDD1Q8TEB9 315 aa11.1□□□□□ -0.63
SMG8-202ENST00000543872 C5orf34Q96MH7 638 aa11.1□□□□□ -0.63
SMG8-202ENST00000543872 PECRQ9BY49 303 aa11.1□□□□□ -0.63
SMG8-202ENST00000543872 NPIPA1Q9UND3 350 aa11.1□□□□□ -0.63
SMG8-202ENST00000543872 SFTPDP35247 375 aa11.1□□□□□ -0.63
SMG8-202ENST00000543872 ERVS71-1P61550 626 aa11.1□□□□□ -0.63
SMG8-202ENST00000543872 WDFY1Q8IWB7 410 aa11.1□□□□□ -0.63
SMG8-202ENST00000543872 ARHGEF39Q8N4T4 335 aa11.1□□□□□ -0.63
SMG8-202ENST00000543872 ACTR3CQ9C0K3 210 aaPredicted RBP11.1□□□□□ -0.63
SMG8-202ENST00000543872 PLEKHJ1Q9NW61 149 aa11.1□□□□□ -0.63
SMG8-202ENST00000543872 MCTS1Q9ULC4 181 aaKnown RBP11.1□□□□□ -0.63
SMG8-202ENST00000543872 TMED7-TICAM2A0A0A6YYA0 188 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms