RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 PMP22Q01453 160 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 IL34Q6ZMJ4 242 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 ZNF767PQ75MW2 155 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 FAM122BQ7Z309 247 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 TMEM105Q8N8V8 129 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 OR5D13Q8NGL4 314 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 OR1S2Q8NGQ3 325 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 OR10R2Q8NGX6 335 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 OR52I2Q8NH67 350 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 ST6GALNAC6Q969X2 333 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 ITPKCQ96DU7 683 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 DDOQ99489 341 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 MPC1Q9Y5U8 109 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 CTRB1P17538 263 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 RFX2P48378 723 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 SELENOPP49908 381 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 CCR6P51684 374 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 AANATQ16613 207 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 ZNF528Q3MIS6 628 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 C1QL3Q5VWW1 255 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 CTRB2Q6GPI1 263 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 ATG4DQ86TL0 474 aaPredicted RBP6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 ZNF721Q8TF20 911 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 PLPPR2Q96GM1 343 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 CNTNAP3BQ96NU0 1288 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 ARV1Q9H2C2 271 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 CXXC4Q9H2H0 198 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 CACFD1Q9UGQ2 172 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 CACNA1HO95180 2353 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 IGHV1-45A0A0A0MS14 117 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 SEC14L6B5MCN3 397 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 HBE1P02100 147 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 RAB6AP20340 208 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 PCMT1P22061 227 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 PCBP3P57721 371 aaKnown RBP6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 KISS1Q15726 138 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 BATFQ16520 125 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 TMEM251Q8N6I4 163 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 SUMF2Q8NBJ7 301 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 TMEM52Q8NDY8 209 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 PAQR8Q8TEZ7 354 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 OCEL1Q9H607 264 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 IL17BQ9UHF5 180 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 FOXJ3Q9UPW0 622 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 HS3ST3B1Q9Y662 390 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 URGCP-MRPS24S4R325 110 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 ARFGEF1Q9Y6D6 1849 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 A0A0B4J2A0 478 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 TMEM200CA6NKL6 621 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 SLC17A2O00624 439 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 GPX5O75715 221 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 CDKN2AP42771 156 aaKnown RBP6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 PEA15Q15121 130 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 WDR38Q5JTN6 314 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 STUMQ69YW2 141 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 INO80CQ6PI98 192 aaPredicted RBP6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 ADGRG3Q86Y34 549 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 HSD17B11Q8NBQ5 300 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 SLC7A6Q92536 515 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 TINAGL1Q9GZM7 467 aaPredicted RBP6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 HES4Q9HCC6 221 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 SHPKQ9UHJ6 478 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 AHRRA9YTQ3 701 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 FADS1O60427 444 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 SSTR2P30874 369 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 FABP5Q01469 135 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 C12orf73Q69YU5 71 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 C11orf44Q8N8P7 122 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 OR8B3Q8NGG8 313 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 TMEM230Q96A57 120 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 OR8B2Q96RD0 313 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 TAAR6Q96RI8 345 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 TMEM208Q9BTX3 173 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 C20orf85Q9H1P6 137 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 OR5V1Q9UGF6 321 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 GOLT1BQ9Y3E0 138 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 GPR179Q6PRD1 2367 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 M0R1X1 148 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 GPANK1O95872 356 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 CELA2AP08217 269 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 CSN1S1P47710 185 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 OR10A3P58181 314 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 LSM6P62312 80 aaKnown RBP6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 INPP5JQ15735 1006 aaPredicted RBP6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 MBNL2Q5VZF2 373 aaKnown RBP6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 LYG1Q8N1E2 194 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 RFESDQ8TAC1 157 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 FAM213BQ8TBF2 198 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 NUDT11Q96G61 164 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 FCRL1Q96LA6 429 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 TMUB1Q9BVT8 246 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 SPTBP11277 2137 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 SPTAN1Q13813 2472 aaKnown RBP6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 UBE2CO00762 179 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 SPINK2P20155 84 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 TIAL1Q01085 375 aaKnown RBP eCLIP6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 KLRB1Q12918 225 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 C3orf36Q3SXR2 165 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 NHLRC1Q6VVB1 395 aa6.1□□□□□ -1.43
SRGAP1-206ENST00000543397 OR8U1Q8NH10 309 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms