RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 VMO1Q7Z5L0 202 aa12.7□□□□□ -0.38
ECHDC2-223ENST00000542552 CMTM4Q8IZR5 234 aa12.7□□□□□ -0.38
ECHDC2-223ENST00000542552 TMEM185AQ8NFB2 350 aa12.7□□□□□ -0.38
ECHDC2-223ENST00000542552 NRG4Q8WWG1 115 aa12.7□□□□□ -0.38
ECHDC2-223ENST00000542552 LHX4Q969G2 390 aa12.7□□□□□ -0.38
ECHDC2-223ENST00000542552 OPALINQ96PE5 141 aa12.7□□□□□ -0.38
ECHDC2-223ENST00000542552 COMMD4Q9H0A8 199 aa12.7□□□□□ -0.38
ECHDC2-223ENST00000542552 VCXQ9H320 206 aa12.7□□□□□ -0.38
ECHDC2-223ENST00000542552 ZCCHC4Q9H5U6 513 aa12.7□□□□□ -0.38
ECHDC2-223ENST00000542552 UNKLQ9H9P5 680 aaKnown RBP12.7□□□□□ -0.38
ECHDC2-223ENST00000542552 ELL3Q9HB65 397 aaPredicted RBP12.7□□□□□ -0.38
ECHDC2-223ENST00000542552 BABAM2Q9NXR7 383 aa12.7□□□□□ -0.38
ECHDC2-223ENST00000542552 CNOT2Q9NZN8 540 aaKnown RBP12.7□□□□□ -0.38
ECHDC2-223ENST00000542552 ONECUT1Q9UBC0 465 aa12.7□□□□□ -0.38
ECHDC2-223ENST00000542552 CLEC2DQ9UHP7 191 aa12.7□□□□□ -0.38
ECHDC2-223ENST00000542552 PSORS1C1Q9UIG5 152 aa12.7□□□□□ -0.38
ECHDC2-223ENST00000542552 SIRT4Q9Y6E7 314 aaPredicted RBP12.7□□□□□ -0.38
ECHDC2-223ENST00000542552 EFCAB10A6NFE3 127 aa12.69□□□□□ -0.38
ECHDC2-223ENST00000542552 DNAJC9-AS1A6NH13 148 aa12.69□□□□□ -0.38
ECHDC2-223ENST00000542552 H0YJX3 145 aa12.69□□□□□ -0.38
ECHDC2-223ENST00000542552 M0R1W7 72 aa12.69□□□□□ -0.38
ECHDC2-223ENST00000542552 LALBAP00709 142 aa12.69□□□□□ -0.38
ECHDC2-223ENST00000542552 MYL12AP19105 171 aa12.69□□□□□ -0.38
ECHDC2-223ENST00000542552 NPBWR2P48146 333 aa12.69□□□□□ -0.38
ECHDC2-223ENST00000542552 ST3GAL4Q11206 333 aa12.69□□□□□ -0.38
ECHDC2-223ENST00000542552 BAMBIQ13145 260 aa12.69□□□□□ -0.38
ECHDC2-223ENST00000542552 DEFB112Q30KQ8 113 aa12.69□□□□□ -0.38
ECHDC2-223ENST00000542552 RUSC1-AS1Q66K80 236 aa12.69□□□□□ -0.38
ECHDC2-223ENST00000542552 ZNF529Q6P280 563 aa12.69□□□□□ -0.38
ECHDC2-223ENST00000542552 SERPINA12Q8IW75 414 aa12.69□□□□□ -0.38
ECHDC2-223ENST00000542552 MKXQ8IYA7 352 aa12.69□□□□□ -0.38
ECHDC2-223ENST00000542552 Q8IYB0 196 aa12.69□□□□□ -0.38
ECHDC2-223ENST00000542552 OR5D14Q8NGL3 314 aa12.69□□□□□ -0.38
ECHDC2-223ENST00000542552 OR13C9Q8NGT0 318 aa12.69□□□□□ -0.38
ECHDC2-223ENST00000542552 OR52N1Q8NH53 320 aa12.69□□□□□ -0.38
ECHDC2-223ENST00000542552 GATAD2BQ8WXI9 593 aa12.69□□□□□ -0.38
ECHDC2-223ENST00000542552 TNFRSF14Q92956 283 aa12.69□□□□□ -0.38
ECHDC2-223ENST00000542552 FAM234AQ9H0X4 552 aa12.69□□□□□ -0.38
ECHDC2-223ENST00000542552 ZMAT3Q9HA38 289 aaKnown RBP12.69□□□□□ -0.38
ECHDC2-223ENST00000542552 MDFIC2A0A1B0GVS7 189 aa12.68□□□□□ -0.38
ECHDC2-223ENST00000542552 K7N7A8 449 aa12.68□□□□□ -0.38
ECHDC2-223ENST00000542552 XPNPEP2O43895 674 aa12.68□□□□□ -0.38
ECHDC2-223ENST00000542552 ZNF737O75373 536 aa12.68□□□□□ -0.38
ECHDC2-223ENST00000542552 TK1P04183 234 aa12.68□□□□□ -0.38
ECHDC2-223ENST00000542552 COMPP49747 757 aaPredicted RBP12.68□□□□□ -0.38
ECHDC2-223ENST00000542552 SLC9A3R2Q15599 337 aa12.68□□□□□ -0.38
ECHDC2-223ENST00000542552 ASPHD2Q6ICH7 369 aa12.68□□□□□ -0.38
ECHDC2-223ENST00000542552 NOX4Q9NPH5 578 aa12.68□□□□□ -0.38
ECHDC2-223ENST00000542552 C19orf12Q9NSK7 152 aa12.68□□□□□ -0.38
ECHDC2-223ENST00000542552 FKBP14Q9NWM8 211 aa12.68□□□□□ -0.38
ECHDC2-223ENST00000542552 OR14J1Q9UGF5 321 aa12.68□□□□□ -0.38
ECHDC2-223ENST00000542552 DHDHQ9UQ10 334 aa12.68□□□□□ -0.38
ECHDC2-223ENST00000542552 DSCAML1Q8TD84 2053 aa12.67□□□□□ -0.38
ECHDC2-223ENST00000542552 IGKV1-12A0A0C4DH73 117 aa12.67□□□□□ -0.38
ECHDC2-223ENST00000542552 A0A1W2PQ09 198 aa12.67□□□□□ -0.38
ECHDC2-223ENST00000542552 TMEM89A2RUT3 159 aa12.67□□□□□ -0.38
ECHDC2-223ENST00000542552 ERICH4A6NGS2 130 aa12.67□□□□□ -0.38
ECHDC2-223ENST00000542552 RNASEK-C17orf49H0YIS7 233 aa12.67□□□□□ -0.38
ECHDC2-223ENST00000542552 SULT1B1O43704 296 aa12.67□□□□□ -0.38
ECHDC2-223ENST00000542552 INMTO95050 263 aa12.67□□□□□ -0.38
ECHDC2-223ENST00000542552 IGKV1D-12P01611 117 aa12.67□□□□□ -0.38
ECHDC2-223ENST00000542552 RNASE1P07998 156 aaKnown RBP12.67□□□□□ -0.38
ECHDC2-223ENST00000542552 CHRM2P08172 466 aa12.67□□□□□ -0.38
ECHDC2-223ENST00000542552 BCL3P20749 454 aa12.67□□□□□ -0.38
ECHDC2-223ENST00000542552 CAPZA1P52907 286 aa12.67□□□□□ -0.38
ECHDC2-223ENST00000542552 COL10A1Q03692 680 aa12.67□□□□□ -0.38
ECHDC2-223ENST00000542552 MED21Q13503 144 aa12.67□□□□□ -0.38
ECHDC2-223ENST00000542552 ZNF146Q15072 292 aa12.67□□□□□ -0.38
ECHDC2-223ENST00000542552 TMEM200BQ69YZ2 307 aa12.67□□□□□ -0.38
ECHDC2-223ENST00000542552 DMKNQ6E0U4 476 aaPredicted RBP12.67□□□□□ -0.38
ECHDC2-223ENST00000542552 Q6YL49 198 aa12.67□□□□□ -0.38
ECHDC2-223ENST00000542552 SAXO1Q8IYX7 474 aa12.67□□□□□ -0.38
ECHDC2-223ENST00000542552 FAM58AQ8N1B3 248 aa12.67□□□□□ -0.38
ECHDC2-223ENST00000542552 PIP4P2Q8N4L2 257 aa12.67□□□□□ -0.38
ECHDC2-223ENST00000542552 GPR148Q8TDV2 347 aa12.67□□□□□ -0.38
ECHDC2-223ENST00000542552 SMIM19Q96E16 107 aa12.67□□□□□ -0.38
ECHDC2-223ENST00000542552 SPACA5Q96QH8 159 aa12.67□□□□□ -0.38
ECHDC2-223ENST00000542552 METTL8Q9H825 291 aaKnown RBP12.67□□□□□ -0.38
ECHDC2-223ENST00000542552 NEK6Q9HC98 313 aa12.67□□□□□ -0.38
ECHDC2-223ENST00000542552 SIRT7Q9NRC8 400 aa12.67□□□□□ -0.38
ECHDC2-223ENST00000542552 RBFOX1Q9NWB1 397 aaKnown RBP12.67□□□□□ -0.38
ECHDC2-223ENST00000542552 CHCHD3Q9NX63 227 aaKnown RBP12.67□□□□□ -0.38
ECHDC2-223ENST00000542552 IL36RNQ9UBH0 155 aa12.67□□□□□ -0.38
ECHDC2-223ENST00000542552 FBN3Q75N90 2809 aa12.66□□□□□ -0.38
ECHDC2-223ENST00000542552 TMEM82A0PJX8 343 aa12.66□□□□□ -0.38
ECHDC2-223ENST00000542552 SPRY1O43609 319 aaPredicted RBP12.66□□□□□ -0.38
ECHDC2-223ENST00000542552 KDM4BO94953 1096 aa12.66□□□□□ -0.38
ECHDC2-223ENST00000542552 CYB5AP00167 134 aa12.66□□□□□ -0.38
ECHDC2-223ENST00000542552 POU3F4P49335 361 aa12.66□□□□□ -0.38
ECHDC2-223ENST00000542552 AQP4P55087 323 aa12.66□□□□□ -0.38
ECHDC2-223ENST00000542552 DLX1P56177 255 aa12.66□□□□□ -0.38
ECHDC2-223ENST00000542552 ZP1P60852 638 aa12.66□□□□□ -0.38
ECHDC2-223ENST00000542552 RPL31P62899 125 aaKnown RBP12.66□□□□□ -0.38
ECHDC2-223ENST00000542552 KISS1Q15726 138 aa12.66□□□□□ -0.38
ECHDC2-223ENST00000542552 C17orf107Q6ZR85 190 aa12.66□□□□□ -0.38
ECHDC2-223ENST00000542552 C11orf42Q8N5U0 333 aa12.66□□□□□ -0.38
ECHDC2-223ENST00000542552 ZSCAN4Q8NAM6 433 aaPredicted RBP12.66□□□□□ -0.38
ECHDC2-223ENST00000542552 BPIFB6Q8NFQ5 453 aa12.66□□□□□ -0.38
ECHDC2-223ENST00000542552 TBC1D15Q8TC07 691 aa12.66□□□□□ -0.38
ECHDC2-223ENST00000542552 TSEN15Q8WW01 171 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms