RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 HTR1EP28566 365 aa2.51□□□□□ -2.01
LEMD3-204ENST00000542032 MYCNOSP40205 109 aa2.51□□□□□ -2.01
LEMD3-204ENST00000542032 RPL5P46777 297 aaKnown RBP2.51□□□□□ -2.01
LEMD3-204ENST00000542032 CDK9P50750 372 aaKnown RBP2.51□□□□□ -2.01
LEMD3-204ENST00000542032 CACNG7P62955 275 aa2.51□□□□□ -2.01
LEMD3-204ENST00000542032 SMAGPQ0VAQ4 97 aa2.51□□□□□ -2.01
LEMD3-204ENST00000542032 SMCO1Q147U7 214 aa2.51□□□□□ -2.01
LEMD3-204ENST00000542032 SHHQ15465 462 aa2.51□□□□□ -2.01
LEMD3-204ENST00000542032 OR1Q1Q15612 314 aa2.51□□□□□ -2.01
LEMD3-204ENST00000542032 PRSS8Q16651 343 aa2.51□□□□□ -2.01
LEMD3-204ENST00000542032 HIST3H3Q16695 136 aa2.51□□□□□ -2.01
LEMD3-204ENST00000542032 C1orf195Q5TG92 126 aa2.51□□□□□ -2.01
LEMD3-204ENST00000542032 TNFAIP8L2Q6P589 184 aaPredicted RBP2.51□□□□□ -2.01
LEMD3-204ENST00000542032 ZNF620Q6ZNG0 422 aa2.51□□□□□ -2.01
LEMD3-204ENST00000542032 RASSF6Q6ZTQ3 369 aa2.51□□□□□ -2.01
LEMD3-204ENST00000542032 TMEM35BQ8NCS4 154 aa2.51□□□□□ -2.01
LEMD3-204ENST00000542032 OR10J5Q8NHC4 309 aa2.51□□□□□ -2.01
LEMD3-204ENST00000542032 Q8WTZ3 238 aa2.51□□□□□ -2.01
LEMD3-204ENST00000542032 MAFIPQ8WZ33 124 aa2.51□□□□□ -2.01
LEMD3-204ENST00000542032 IL22RA2Q969J5 263 aa2.51□□□□□ -2.01
LEMD3-204ENST00000542032 PPCDCQ96CD2 204 aa2.51□□□□□ -2.01
LEMD3-204ENST00000542032 OR10C1Q96KK4 312 aa2.51□□□□□ -2.01
LEMD3-204ENST00000542032 CEP170P1Q96L14 293 aa2.51□□□□□ -2.01
LEMD3-204ENST00000542032 RDH12Q96NR8 316 aa2.51□□□□□ -2.01
LEMD3-204ENST00000542032 FAAP24Q9BTP7 215 aa2.51□□□□□ -2.01
LEMD3-204ENST00000542032 DDA1Q9BW61 102 aa2.51□□□□□ -2.01
LEMD3-204ENST00000542032 VSIRQ9H7M9 311 aa2.51□□□□□ -2.01
LEMD3-204ENST00000542032 ZNF430Q9H8G1 570 aaPredicted RBP2.51□□□□□ -2.01
LEMD3-204ENST00000542032 RBM22Q9NW64 420 aaKnown RBP eCLIP2.51□□□□□ -2.01
LEMD3-204ENST00000542032 NDRG2Q9UN36 371 aaKnown RBP2.51□□□□□ -2.01
LEMD3-204ENST00000542032 TRAPPC4Q9Y296 219 aa2.51□□□□□ -2.01
LEMD3-204ENST00000542032 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.51□□□□□ -2.01
LEMD3-204ENST00000542032 LSM5Q9Y4Y9 91 aaKnown RBP2.51□□□□□ -2.01
LEMD3-204ENST00000542032 ORC6Q9Y5N6 252 aa2.51□□□□□ -2.01
LEMD3-204ENST00000542032 NUP153P49790 1475 aaKnown RBP2.51□□□□□ -2.01
LEMD3-204ENST00000542032 CPDO75976 1380 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 IGLV1-36A0A0B4J1U3 117 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 TRAV39A0A0B4J263 110 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 EVPLLA8MZ36 301 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 H7C417 338 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 J3QT63 122 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 XKRYO14609 159 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 KMOO15229 486 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 TCAPO15273 167 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 HCRTR1O43613 425 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 CNMDO75829 334 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 IGKV1D-16P01601 117 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 HPNP05981 417 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 IGKV5-2P06315 115 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 ICAM2P13598 275 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 GTF2F2P13984 249 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 AKR1C4P17516 323 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 ATF1P18846 271 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 PAX6P26367 422 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 PSMB9P28065 219 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 TSPOP30536 169 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 ADORA1P30542 326 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 FMO3P31513 532 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 CCR7P32248 378 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 MPIP34949 423 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 GGT2P36268 569 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 RPS9P46781 194 aaKnown RBP2.5□□□□□ -2.01
LEMD3-204ENST00000542032 GCLMP48507 274 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 MTPNP58546 118 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 IGLV3-21P80748 117 aaPredicted RBP2.5□□□□□ -2.01
LEMD3-204ENST00000542032 TFAMQ00059 246 aaKnown RBP2.5□□□□□ -2.01
LEMD3-204ENST00000542032 FMODQ06828 376 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 PRDX1Q06830 199 aaKnown RBP2.5□□□□□ -2.01
LEMD3-204ENST00000542032 BAXQ07812 192 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 GINS1Q14691 196 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 QPRTQ15274 297 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 TOMM34Q15785 309 aaPredicted RBP2.5□□□□□ -2.01
LEMD3-204ENST00000542032 LRRC26Q2I0M4 334 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 TIMM50Q3ZCQ8 353 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 C1orf100Q5SVJ3 147 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 HIST2H3PS2Q5TEC6 136 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 ZNF530Q6P9A1 599 aaPredicted RBP2.5□□□□□ -2.01
LEMD3-204ENST00000542032 WDR74Q6RFH5 385 aaPredicted RBP2.5□□□□□ -2.01
LEMD3-204ENST00000542032 UNQ9370/PRO34162Q6UXP9 181 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 DNM1P46Q6ZS02 220 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 TMEM144Q7Z5S9 345 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 PHF13Q86YI8 300 aaPredicted RBP2.5□□□□□ -2.01
LEMD3-204ENST00000542032 LRRC25Q8N386 305 aaPredicted RBP2.5□□□□□ -2.01
LEMD3-204ENST00000542032 BLNKQ8WV28 456 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 ASB17Q8WXJ9 295 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 ASB13Q8WXK3 278 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 FAM3DQ96BQ1 224 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 BTN2A3PQ96KV6 586 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 OR2V2Q96R30 315 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 SIGMAR1Q99720 223 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 SULT4A1Q9BR01 284 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 SLIRPQ9GZT3 109 aaKnown RBP2.5□□□□□ -2.01
LEMD3-204ENST00000542032 OR51I1Q9H343 314 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 BOLA2Q9H3K6 86 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 ISG20L2Q9H9L3 353 aaKnown RBP2.5□□□□□ -2.01
LEMD3-204ENST00000542032 TMEM100Q9NV29 134 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 CMTM6Q9NX76 183 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 XCL2Q9UBD3 114 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 MTFP1Q9UDX5 166 aa2.5□□□□□ -2.01
LEMD3-204ENST00000542032 VAX2Q9UIW0 290 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms