RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, human

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-219	ENST00000541513	RIMKLA	Q8IXN7	391 aa		4.54	□□□□□ -1.68
DDB1-219	ENST00000541513	PIANP	Q8IYJ0	282 aa		4.54	□□□□□ -1.68
DDB1-219	ENST00000541513	KIR2DL5A	Q8N109	375 aa		4.54	□□□□□ -1.68
DDB1-219	ENST00000541513	NANOGP1	Q8N7R0	232 aa		4.54	□□□□□ -1.68
DDB1-219	ENST00000541513	WDR31	Q8NA23	367 aa		4.54	□□□□□ -1.68
DDB1-219	ENST00000541513	HSD17B11	Q8NBQ5	300 aa		4.54	□□□□□ -1.68
DDB1-219	ENST00000541513	SEMA6D	Q8NFY4	1073 aa		4.54	□□□□□ -1.68
DDB1-219	ENST00000541513	OR9Q2	Q8NGE9	314 aa		4.54	□□□□□ -1.68
DDB1-219	ENST00000541513	KIR2DL5B	Q8NHK3	375 aa		4.54	□□□□□ -1.68
DDB1-219	ENST00000541513	ZNF502	Q8TBZ5	544 aa		4.54	□□□□□ -1.68
DDB1-219	ENST00000541513	FAM45A	Q8TCE6	357 aa		4.54	□□□□□ -1.68
DDB1-219	ENST00000541513	ANKRD9	Q96BM1	317 aa	Predicted RBP	4.54	□□□□□ -1.68
DDB1-219	ENST00000541513	CAPZA3	Q96KX2	299 aa		4.54	□□□□□ -1.68
DDB1-219	ENST00000541513	C20orf173	Q96LM9	149 aa		4.54	□□□□□ -1.68
DDB1-219	ENST00000541513	ZNF681	Q96N22	645 aa		4.54	□□□□□ -1.68
DDB1-219	ENST00000541513	SORCS2	Q96PQ0	1159 aa		4.54	□□□□□ -1.68
DDB1-219	ENST00000541513	ALKBH3	Q96Q83	286 aa	Predicted RBP	4.54	□□□□□ -1.68
DDB1-219	ENST00000541513	OR2V2	Q96R30	315 aa		4.54	□□□□□ -1.68
DDB1-219	ENST00000541513	TRIB3	Q96RU7	358 aa		4.54	□□□□□ -1.68
DDB1-219	ENST00000541513	LYSMD1	Q96S90	227 aa		4.54	□□□□□ -1.68
DDB1-219	ENST00000541513	TSNAX	Q99598	290 aa	Known RBP	4.54	□□□□□ -1.68
DDB1-219	ENST00000541513	FOXC2	Q99958	501 aa		4.54	□□□□□ -1.68
DDB1-219	ENST00000541513	HCAR1	Q9BXC0	346 aa		4.54	□□□□□ -1.68
DDB1-219	ENST00000541513	NT5DC2	Q9H857	520 aa		4.54	□□□□□ -1.68
DDB1-219	ENST00000541513	WDR41	Q9HAD4	459 aa		4.54	□□□□□ -1.68
DDB1-219	ENST00000541513	SIAE	Q9HAT2	523 aa		4.54	□□□□□ -1.68
DDB1-219	ENST00000541513	PLEKHA3	Q9HB20	300 aa		4.54	□□□□□ -1.68
DDB1-219	ENST00000541513	KLK11	Q9UBX7	282 aa		4.54	□□□□□ -1.68
DDB1-219	ENST00000541513	SEC14L4	Q9UDX3	406 aa		4.54	□□□□□ -1.68
DDB1-219	ENST00000541513		Q9UF83	564 aa		4.54	□□□□□ -1.68
DDB1-219	ENST00000541513	ALG5	Q9Y673	324 aa		4.54	□□□□□ -1.68
DDB1-219	ENST00000541513	PCDH15	Q96QU1	1955 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	IGLV5-45	A0A087WSX0	123 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	IGHV4-61	A0A0C4DH41	118 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	KIR2DS1	A0A191URI9	304 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513		A0A1B0GW55	424 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513		F5H768	121 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	ZNF593	O00488	134 aa	Predicted RBP	4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	FCN1	O00602	326 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	ACOT8	O14734	319 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	SYNGR1	O43759	233 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	MPZL2	O60487	215 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	GCG	P01275	180 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	IGHV4-59	P01825	116 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	KLK3	P07288	261 aa	Predicted RBP	4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	DUX4L2	P0CJ85	424 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	DUX4L3	P0CJ86	424 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	DUX4L4	P0CJ87	422 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	DUX4L5	P0CJ88	424 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	DUX4L6	P0CJ89	424 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	DUX4L7	P0CJ90	424 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	LIMS3	P0CW19	117 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	LIMS4	P0CW20	117 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	IGHV4-38-2	P0DP08	117 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	ZNF30	P17039	623 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	FCGR2C	P31995	323 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	RPL22	P35268	128 aa	Known RBP	4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	DCT	P40126	519 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	RAP1B	P61224	184 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	NUTF2	P61970	127 aa	Known RBP	4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	PRKCD	Q05655	676 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	DLG1	Q12959	904 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	SRSF6	Q13247	344 aa	Known RBP	4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	ICAM4	Q14773	271 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	KIR2DS1	Q14954	304 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	KCNJ8	Q15842	424 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	DUX4L9	Q6RFH8	374 aa	Predicted RBP	4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	MBOAT2	Q6ZWT7	520 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	ISCA2	Q86U28	154 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	LRRC18	Q8N456	261 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	OR10W1	Q8NGF6	305 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	OR9A2	Q8NGT5	310 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	OR2AE1	Q8NHA4	323 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	SFXN5	Q8TD22	340 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	BLOC1S5	Q8TDH9	187 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	DOK4	Q8TEW6	326 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	SMIM19	Q96E16	107 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	ADGRG7	Q96K78	797 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	FAM218A	Q96MZ4	157 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	MCHR1	Q99705	422 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	TBL1Y	Q9BQ87	522 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	RHNO1	Q9BSD3	238 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	DSN1	Q9H410	356 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	C6orf106	Q9H6K1	298 aa	Predicted RBP	4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	UGT1A8	Q9HAW9	530 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	RHOF	Q9HBH0	211 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	RDH14	Q9HBH5	336 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	IL1RAP	Q9NPH3	570 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	SLC2A9	Q9NRM0	540 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	DUX4	Q9UBX2	424 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	ING4	Q9UNL4	249 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	SAMD4A	Q9UPU9	718 aa	Known RBP	4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	SPTBN4	Q9H254	2564 aa		4.53	□□□□□ -1.68
DDB1-219	ENST00000541513	MYO15A	Q9UKN7	3530 aa		4.52	□□□□□ -1.69
DDB1-219	ENST00000541513	KNTC1	P50748	2209 aa		4.52	□□□□□ -1.69
DDB1-219	ENST00000541513		A6NDN8	102 aa		4.52	□□□□□ -1.69
DDB1-219	ENST00000541513	LINC01548	A6NM66	108 aa		4.52	□□□□□ -1.69
DDB1-219	ENST00000541513		B4DXG7	233 aa		4.52	□□□□□ -1.69
DDB1-219	ENST00000541513	C21orf140	B9A014	251 aa		4.52	□□□□□ -1.69
DDB1-219	ENST00000541513	INAFM1	C9JVW0	142 aa		4.52	□□□□□ -1.69

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