RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 HOXB5P09067 269 aa14.91□□□□□ -0.02
SPIDR-227ENST00000541342 HKR1P10072 659 aa14.91□□□□□ -0.02
SPIDR-227ENST00000541342 NME2P22392 152 aa14.91□□□□□ -0.02
SPIDR-227ENST00000541342 PTGER4P35408 488 aa14.91□□□□□ -0.02
SPIDR-227ENST00000541342 OR14K1Q8NGZ2 314 aa14.91□□□□□ -0.02
SPIDR-227ENST00000541342 ABHD3Q8WU67 409 aa14.91□□□□□ -0.02
SPIDR-227ENST00000541342 SAT2Q96F10 170 aaPredicted RBP14.91□□□□□ -0.02
SPIDR-227ENST00000541342 OR10A2Q9H208 303 aa14.91□□□□□ -0.02
SPIDR-227ENST00000541342 B4GALT7Q9UBV7 327 aa14.91□□□□□ -0.02
SPIDR-227ENST00000541342 OR5H15A6NDH6 313 aa14.91□□□□□ -0.02
SPIDR-227ENST00000541342 FCGR3AP08637 254 aa14.91□□□□□ -0.02
SPIDR-227ENST00000541342 ZNF708P17019 499 aa14.91□□□□□ -0.02
SPIDR-227ENST00000541342 KCNJ3P48549 501 aa14.91□□□□□ -0.02
SPIDR-227ENST00000541342 ARFRP1Q13795 201 aa14.91□□□□□ -0.02
SPIDR-227ENST00000541342 C2CD4CQ8TF44 421 aa14.91□□□□□ -0.02
SPIDR-227ENST00000541342 INTS12Q96CB8 462 aaKnown RBP14.91□□□□□ -0.02
SPIDR-227ENST00000541342 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.91□□□□□ -0.025e-7■■■■■ 41.3
SPIDR-227ENST00000541342 EHFQ9NZC4 300 aa14.91□□□□□ -0.02
SPIDR-227ENST00000541342 GSKIPQ9P0R6 139 aa14.91□□□□□ -0.02
SPIDR-227ENST00000541342 DNAJB11Q9UBS4 358 aa14.91□□□□□ -0.02
SPIDR-227ENST00000541342 ZNF407Q9C0G0 2248 aa14.91□□□□□ -0.02
SPIDR-227ENST00000541342 MSTNO14793 375 aa14.91□□□□□ -0.02
SPIDR-227ENST00000541342 CD5P06127 495 aa14.91□□□□□ -0.02
SPIDR-227ENST00000541342 SFTA3P0C7M3 94 aa14.91□□□□□ -0.02
SPIDR-227ENST00000541342 WT1P19544 449 aaPredicted RBP14.91□□□□□ -0.02
SPIDR-227ENST00000541342 CLDN18P56856 261 aa14.91□□□□□ -0.02
SPIDR-227ENST00000541342 NPRL2Q8WTW4 380 aa14.91□□□□□ -0.02
SPIDR-227ENST00000541342 CYTIPO60759 359 aa14.9□□□□□ -0.02
SPIDR-227ENST00000541342 SERPINA5P05154 406 aa14.9□□□□□ -0.02
SPIDR-227ENST00000541342 NBL1P41271 181 aa14.9□□□□□ -0.02
SPIDR-227ENST00000541342 MEOX1P50221 254 aa14.9□□□□□ -0.02
SPIDR-227ENST00000541342 S100A10P60903 97 aa14.9□□□□□ -0.02
SPIDR-227ENST00000541342 SRYQ05066 204 aa14.9□□□□□ -0.02
SPIDR-227ENST00000541342 PDZK1IP1Q13113 114 aa14.9□□□□□ -0.02
SPIDR-227ENST00000541342 TMEM268Q5VZI3 342 aa14.9□□□□□ -0.02
SPIDR-227ENST00000541342 CPNE4Q96A23 557 aaPredicted RBP14.9□□□□□ -0.02
SPIDR-227ENST00000541342 GPER1Q99527 375 aa14.9□□□□□ -0.02
SPIDR-227ENST00000541342 TAF9BQ9HBM6 251 aa14.9□□□□□ -0.02
SPIDR-227ENST00000541342 ZNF84P51523 738 aa14.9□□□□□ -0.02
SPIDR-227ENST00000541342 KISS1Q15726 138 aa14.9□□□□□ -0.02
SPIDR-227ENST00000541342 BTNL8Q6UX41 500 aa14.9□□□□□ -0.02
SPIDR-227ENST00000541342 ETV3LQ6ZN32 361 aa14.9□□□□□ -0.02
SPIDR-227ENST00000541342 ZFP82Q8N141 532 aa14.9□□□□□ -0.02
SPIDR-227ENST00000541342 CSNK2A3Q8NEV1 391 aa14.9□□□□□ -0.02
SPIDR-227ENST00000541342 OR51T1Q8NGJ9 327 aa14.9□□□□□ -0.02
SPIDR-227ENST00000541342 LINC01387J3KSC0 135 aa14.89□□□□□ -0.03
SPIDR-227ENST00000541342 RBM39Q14498 530 aaKnown RBP14.89□□□□□ -0.03
SPIDR-227ENST00000541342 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.89□□□□□ -0.03
SPIDR-227ENST00000541342 FOXRED2Q8IWF2 684 aa14.89□□□□□ -0.03
SPIDR-227ENST00000541342 COLCA2A8K830 154 aa14.89□□□□□ -0.03
SPIDR-227ENST00000541342 RNASEK-C17orf49H0YIS7 233 aa14.89□□□□□ -0.03
SPIDR-227ENST00000541342 MED6O75586 246 aa14.89□□□□□ -0.03
SPIDR-227ENST00000541342 IGLV3-1P01715 115 aa14.89□□□□□ -0.03
SPIDR-227ENST00000541342 NAT2P11245 290 aa14.89□□□□□ -0.03
SPIDR-227ENST00000541342 GUCA1AP43080 201 aaPredicted RBP14.89□□□□□ -0.03
SPIDR-227ENST00000541342 PTGFRP43088 359 aa14.89□□□□□ -0.03
SPIDR-227ENST00000541342 DOK3Q7L591 496 aa14.89□□□□□ -0.03
SPIDR-227ENST00000541342 FBXO17Q96EF6 278 aa14.89□□□□□ -0.03
SPIDR-227ENST00000541342 PECRQ9BY49 303 aa14.89□□□□□ -0.03
SPIDR-227ENST00000541342 CRLF2Q9HC73 371 aa14.89□□□□□ -0.03
SPIDR-227ENST00000541342 MUC6Q6W4X9 2439 aa14.89□□□□□ -0.03
SPIDR-227ENST00000541342 KNG1P01042 644 aa14.89□□□□□ -0.03
SPIDR-227ENST00000541342 OR3A2P47893 321 aa14.89□□□□□ -0.03
SPIDR-227ENST00000541342 HIST1H3AP68431 136 aa14.89□□□□□ -0.03
SPIDR-227ENST00000541342 PLGLB1Q02325 96 aa14.89□□□□□ -0.03
SPIDR-227ENST00000541342 HIST2H3PS2Q5TEC6 136 aa14.89□□□□□ -0.03
SPIDR-227ENST00000541342 HIST2H3AQ71DI3 136 aa14.89□□□□□ -0.03
SPIDR-227ENST00000541342 AAED1Q7RTV5 226 aa14.89□□□□□ -0.03
SPIDR-227ENST00000541342 ALKBH3Q96Q83 286 aaPredicted RBP14.89□□□□□ -0.03
SPIDR-227ENST00000541342 URM1Q9BTM9 101 aaKnown RBP14.89□□□□□ -0.03
SPIDR-227ENST00000541342 ZNF552Q9H707 407 aaPredicted RBP14.89□□□□□ -0.03
SPIDR-227ENST00000541342 MCTS1Q9ULC4 181 aaKnown RBP14.89□□□□□ -0.03
SPIDR-227ENST00000541342 KLF13Q9Y2Y9 288 aaPredicted RBP14.89□□□□□ -0.03
SPIDR-227ENST00000541342 DNAJC13O75165 2243 aa14.88□□□□□ -0.03
SPIDR-227ENST00000541342 RIF1Q5UIP0 2472 aaKnown RBP14.88□□□□□ -0.03
SPIDR-227ENST00000541342 PQLC2LA1A4F0 135 aa14.88□□□□□ -0.03
SPIDR-227ENST00000541342 AGPAT2O15120 278 aa14.88□□□□□ -0.03
SPIDR-227ENST00000541342 MTRF1O75570 445 aaKnown RBP14.88□□□□□ -0.03
SPIDR-227ENST00000541342 SFTPBP07988 381 aa14.88□□□□□ -0.03
SPIDR-227ENST00000541342 CBX5P45973 191 aa14.88□□□□□ -0.03
SPIDR-227ENST00000541342 SOX8P57073 446 aa14.88□□□□□ -0.03
SPIDR-227ENST00000541342 UBE2V2Q15819 145 aa14.88□□□□□ -0.03
SPIDR-227ENST00000541342 RSPO4Q2I0M5 234 aaPredicted RBP14.88□□□□□ -0.03
SPIDR-227ENST00000541342 RSPO1Q2MKA7 263 aaPredicted RBP14.88□□□□□ -0.03
SPIDR-227ENST00000541342 FIGNL2A6NMB9 653 aa14.88□□□□□ -0.03
SPIDR-227ENST00000541342 PRF1P14222 555 aa14.88□□□□□ -0.03
SPIDR-227ENST00000541342 BLVRBP30043 206 aaPredicted RBP14.88□□□□□ -0.03
SPIDR-227ENST00000541342 ALDH3B1P43353 468 aa14.88□□□□□ -0.03
SPIDR-227ENST00000541342 SULT1A2P50226 295 aa14.88□□□□□ -0.03
SPIDR-227ENST00000541342 TAS2R46P59540 309 aa14.88□□□□□ -0.03
SPIDR-227ENST00000541342 NSUN5P2Q63ZY6 315 aa14.88□□□□□ -0.03
SPIDR-227ENST00000541342 DHRS11Q6UWP2 260 aa14.88□□□□□ -0.03
SPIDR-227ENST00000541342 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.88□□□□□ -0.03
SPIDR-227ENST00000541342 GJC3Q8NFK1 279 aa14.88□□□□□ -0.03
SPIDR-227ENST00000541342 SCGB3A2Q96PL1 93 aa14.88□□□□□ -0.03
SPIDR-227ENST00000541342 LRFN3Q9BTN0 628 aa14.88□□□□□ -0.03
SPIDR-227ENST00000541342 BIN3Q9NQY0 253 aa14.88□□□□□ -0.03
SPIDR-227ENST00000541342 DHRS7CA6NNS2 312 aa14.87□□□□□ -0.03
SPIDR-227ENST00000541342 TM4SF5O14894 197 aa14.87□□□□□ -0.03
SPIDR-227ENST00000541342 B2MP61769 119 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms