RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 RCL1Q9Y2P8 373 aaKnown RBP12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 ZNF205O95201 554 aa12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 SCGB1D2O95969 90 aa12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 ANOS1P23352 680 aa12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 OR3A2P47893 321 aa12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 DAP3P51398 398 aaKnown RBP12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 GAMTQ14353 236 aa12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 SURF2Q15527 256 aaPredicted RBP12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 SLC22A24Q8N4F4 322 aa12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 TMEM156Q8N614 296 aa12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 ZNF441Q8N8Z8 693 aa12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 ASB10Q8WXI3 467 aa12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 ALX4Q9H161 411 aaPredicted RBP12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 TAF9BQ9HBM6 251 aa12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 NXT1Q9UKK6 140 aaKnown RBP12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 MRPS28Q9Y2Q9 187 aaKnown RBP12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 IFITM10A6NMD0 228 aa12.53□□□□□ -0.4
SFSWAP-210ENST00000541286 F5H5K5 113 aa12.53□□□□□ -0.4
SFSWAP-210ENST00000541286 NPIPB7O75200 414 aa12.53□□□□□ -0.4
SFSWAP-210ENST00000541286 MT-ND4LP03901 98 aa12.53□□□□□ -0.4
SFSWAP-210ENST00000541286 KLK2P20151 261 aa12.53□□□□□ -0.4
SFSWAP-210ENST00000541286 AGAP20933 346 aa12.53□□□□□ -0.4
SFSWAP-210ENST00000541286 RAB32Q13637 225 aa12.53□□□□□ -0.4
SFSWAP-210ENST00000541286 FDCSPQ8NFU4 85 aa12.53□□□□□ -0.4
SFSWAP-210ENST00000541286 RAB3CQ96E17 227 aa12.53□□□□□ -0.4
SFSWAP-210ENST00000541286 SLCO5A1Q9H2Y9 848 aa12.53□□□□□ -0.4
SFSWAP-210ENST00000541286 C1orf198Q9H425 327 aa12.53□□□□□ -0.4
SFSWAP-210ENST00000541286 GPR84Q9NQS5 396 aa12.53□□□□□ -0.4
SFSWAP-210ENST00000541286 PPP4R1LQ9P1A2 415 aa12.53□□□□□ -0.4
SFSWAP-210ENST00000541286 C19orf25Q9UFG5 118 aaPredicted RBP12.53□□□□□ -0.4
SFSWAP-210ENST00000541286 MYO7BQ6PIF6 2116 aa12.53□□□□□ -0.4
SFSWAP-210ENST00000541286 ZFAND5O76080 213 aa12.53□□□□□ -0.4
SFSWAP-210ENST00000541286 C15orf54Q8N8G6 183 aa12.53□□□□□ -0.4
SFSWAP-210ENST00000541286 ZNF701Q9NV72 531 aaPredicted RBP12.53□□□□□ -0.4
SFSWAP-210ENST00000541286 METTL1Q9UBP6 276 aaKnown RBP12.53□□□□□ -0.4
SFSWAP-210ENST00000541286 RFNGQ9Y644 331 aa12.53□□□□□ -0.4
SFSWAP-210ENST00000541286 A6NIZ1 184 aa12.52□□□□□ -0.4
SFSWAP-210ENST00000541286 AMY2BP19961 511 aa12.52□□□□□ -0.4
SFSWAP-210ENST00000541286 S100A2P29034 98 aa12.52□□□□□ -0.4
SFSWAP-210ENST00000541286 ZNF41P51814 821 aaPredicted RBP12.52□□□□□ -0.4
SFSWAP-210ENST00000541286 RAP1BP61224 184 aa12.52□□□□□ -0.4
SFSWAP-210ENST00000541286 RAP1AP62834 184 aa12.52□□□□□ -0.4
SFSWAP-210ENST00000541286 RTP5Q14D33 572 aa12.52□□□□□ -0.4
SFSWAP-210ENST00000541286 DRAM2Q6UX65 266 aa12.52□□□□□ -0.4
SFSWAP-210ENST00000541286 SLC25A42Q86VD7 318 aa12.52□□□□□ -0.4
SFSWAP-210ENST00000541286 PNLDC1Q8NA58 520 aaKnown RBP12.52□□□□□ -0.4
SFSWAP-210ENST00000541286 KCNE4Q8WWG9 221 aa12.52□□□□□ -0.4
SFSWAP-210ENST00000541286 OR10C1Q96KK4 312 aa12.52□□□□□ -0.4
SFSWAP-210ENST00000541286 GPR61Q9BZJ8 451 aa12.52□□□□□ -0.4
SFSWAP-210ENST00000541286 CHST11Q9NPF2 352 aa12.52□□□□□ -0.4
SFSWAP-210ENST00000541286 SERINC1Q9NRX5 453 aa12.52□□□□□ -0.4
SFSWAP-210ENST00000541286 KLHL13Q9P2N7 655 aa12.52□□□□□ -0.4
SFSWAP-210ENST00000541286 PINLYPA6NC86 204 aa12.52□□□□□ -0.41
SFSWAP-210ENST00000541286 HSPB2A8KAH6 182 aa12.52□□□□□ -0.41
SFSWAP-210ENST00000541286 SOX15O60248 233 aa12.52□□□□□ -0.41
SFSWAP-210ENST00000541286 MDKP21741 143 aaPredicted RBP12.52□□□□□ -0.41
SFSWAP-210ENST00000541286 PMP22Q01453 160 aa12.52□□□□□ -0.41
SFSWAP-210ENST00000541286 MYBPHQ13203 477 aa12.52□□□□□ -0.41
SFSWAP-210ENST00000541286 HSPB2Q16082 182 aa12.52□□□□□ -0.41
SFSWAP-210ENST00000541286 SSX3Q99909 188 aa12.52□□□□□ -0.41
SFSWAP-210ENST00000541286 PPIHO43447 177 aaKnown RBP12.52□□□□□ -0.41
SFSWAP-210ENST00000541286 SNRPCP09234 159 aaKnown RBP12.52□□□□□ -0.41
SFSWAP-210ENST00000541286 SERPINA2P20848 420 aa12.52□□□□□ -0.41
SFSWAP-210ENST00000541286 GLP1RP43220 463 aa12.52□□□□□ -0.41
SFSWAP-210ENST00000541286 LRRC18Q8N456 261 aa12.52□□□□□ -0.41
SFSWAP-210ENST00000541286 NKAIN3Q8N8D7 197 aa12.52□□□□□ -0.41
SFSWAP-210ENST00000541286 UBAC2Q8NBM4 344 aa12.52□□□□□ -0.41
SFSWAP-210ENST00000541286 AQP3Q92482 292 aa12.52□□□□□ -0.41
SFSWAP-210ENST00000541286 ARHGAP5-AS1Q96IT6 56 aa12.52□□□□□ -0.41
SFSWAP-210ENST00000541286 TMPRSS5Q9H3S3 457 aa12.52□□□□□ -0.41
SFSWAP-210ENST00000541286 DEPPQ9NTK1 212 aa12.52□□□□□ -0.41
SFSWAP-210ENST00000541286 ZNF878C9JN71 531 aa12.51□□□□□ -0.41
SFSWAP-210ENST00000541286 RAMP1O60894 148 aa12.51□□□□□ -0.41
SFSWAP-210ENST00000541286 HEXAP06865 529 aa12.51□□□□□ -0.41
SFSWAP-210ENST00000541286 QDPRP09417 244 aa12.51□□□□□ -0.41
SFSWAP-210ENST00000541286 BTF3P20290 206 aaKnown RBP12.51□□□□□ -0.41
SFSWAP-210ENST00000541286 HTR5AP47898 357 aa12.51□□□□□ -0.41
SFSWAP-210ENST00000541286 SULT1A1P50225 295 aa12.51□□□□□ -0.41
SFSWAP-210ENST00000541286 ZNF121P58317 390 aaPredicted RBP12.51□□□□□ -0.41
SFSWAP-210ENST00000541286 SSX2Q16385 188 aa12.51□□□□□ -0.41
SFSWAP-210ENST00000541286 ZNF674Q2M3X9 581 aa12.51□□□□□ -0.41
SFSWAP-210ENST00000541286 SPNS3Q6ZMD2 512 aa12.51□□□□□ -0.41
SFSWAP-210ENST00000541286 HIST2H3AQ71DI3 136 aa12.51□□□□□ -0.41
SFSWAP-210ENST00000541286 UEVLDQ8IX04 471 aa12.51□□□□□ -0.41
SFSWAP-210ENST00000541286 SPACA3Q8IXA5 215 aa12.51□□□□□ -0.41
SFSWAP-210ENST00000541286 SLC30A7Q8NEW0 376 aa12.51□□□□□ -0.41
SFSWAP-210ENST00000541286 EXTL1Q92935 676 aa12.51□□□□□ -0.41
SFSWAP-210ENST00000541286 DDIT4LQ96D03 193 aa12.51□□□□□ -0.41
SFSWAP-210ENST00000541286 MISP3Q96FF7 219 aa12.51□□□□□ -0.41
SFSWAP-210ENST00000541286 TMEM59Q9BXS4 323 aa12.51□□□□□ -0.41
SFSWAP-210ENST00000541286 FTCDNL1E5RQL4 147 aa12.51□□□□□ -0.41
SFSWAP-210ENST00000541286 IGHV2-5P01817 119 aa12.51□□□□□ -0.41
SFSWAP-210ENST00000541286 SSBP1Q04837 148 aaKnown RBP12.51□□□□□ -0.41
SFSWAP-210ENST00000541286 C17orf67Q0P5P2 114 aa12.51□□□□□ -0.41
SFSWAP-210ENST00000541286 TOMM20Q15388 145 aa12.51□□□□□ -0.41
SFSWAP-210ENST00000541286 RSU1Q15404 277 aa12.51□□□□□ -0.41
SFSWAP-210ENST00000541286 TMEM176BQ3YBM2 270 aaPredicted RBP12.51□□□□□ -0.41
SFSWAP-210ENST00000541286 MIDNQ504T8 468 aa12.51□□□□□ -0.41
SFSWAP-210ENST00000541286 OR51T1Q8NGJ9 327 aa12.51□□□□□ -0.41
SFSWAP-210ENST00000541286 KCNK17Q96T54 332 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms