RNA–Protein interactions for RNA: ENST00000541108.1

CLIP1-215, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-215ENST00000541108 ZMAT3Q9HA38 289 aaKnown RBP15.04■□□□□ -0
CLIP1-215ENST00000541108 RBFOX1Q9NWB1 397 aaKnown RBP15.04■□□□□ -0
CLIP1-215ENST00000541108 TAS2R8Q9NYW2 309 aa15.04■□□□□ -0
CLIP1-215ENST00000541108 MTFP1Q9UDX5 166 aa15.04■□□□□ -0
CLIP1-215ENST00000541108 IL19Q9UHD0 177 aa15.04■□□□□ -0
CLIP1-215ENST00000541108 SERPINE3A8MV23 424 aa15.03■□□□□ -0
CLIP1-215ENST00000541108 ECDO95905 644 aaPredicted RBP15.03■□□□□ -0
CLIP1-215ENST00000541108 PTTG1O95997 202 aa15.03■□□□□ -0
CLIP1-215ENST00000541108 LPLP06858 475 aa15.03■□□□□ -0
CLIP1-215ENST00000541108 GSTT2BP0CG30 244 aa15.03■□□□□ -0
CLIP1-215ENST00000541108 PGA5P0DJD9 388 aa15.03■□□□□ -0
CLIP1-215ENST00000541108 LOXP28300 417 aaPredicted RBP15.03■□□□□ -0
CLIP1-215ENST00000541108 SRP9P49458 86 aaKnown RBP15.03■□□□□ -0
CLIP1-215ENST00000541108 EFNB3Q15768 340 aa15.03■□□□□ -0
CLIP1-215ENST00000541108 TOMM5Q8N4H5 51 aa15.03■□□□□ -0
CLIP1-215ENST00000541108 FAM222BQ8WU58 562 aa15.03■□□□□ -0
CLIP1-215ENST00000541108 GCDHQ92947 438 aaPredicted RBP15.03■□□□□ -0
CLIP1-215ENST00000541108 CISD1Q9NZ45 108 aaKnown RBP15.03■□□□□ -0
CLIP1-215ENST00000541108 KLK11Q9UBX7 282 aa15.03■□□□□ -0
CLIP1-215ENST00000541108 KCNK7Q9Y2U2 307 aa15.03■□□□□ -0
CLIP1-215ENST00000541108 TMEM235A6NFC5 223 aa15.03■□□□□ -0
CLIP1-215ENST00000541108 F8VVB4 439 aa15.03■□□□□ -0
CLIP1-215ENST00000541108 F8VWA3 439 aa15.03■□□□□ -0
CLIP1-215ENST00000541108 MFNGO00587 321 aa15.03■□□□□ -0
CLIP1-215ENST00000541108 GEMIN2O14893 280 aaKnown RBP15.03■□□□□ -0
CLIP1-215ENST00000541108 PLA2G10O15496 165 aa15.03■□□□□ -0
CLIP1-215ENST00000541108 CA11O75493 328 aa15.03■□□□□ -0
CLIP1-215ENST00000541108 GNB3P16520 340 aa15.03■□□□□ -0
CLIP1-215ENST00000541108 IGFBP2P18065 325 aa15.03■□□□□ -0
CLIP1-215ENST00000541108 TNFSF4P23510 183 aa15.03■□□□□ -0
CLIP1-215ENST00000541108 GABRR1P24046 479 aa15.03■□□□□ -0
CLIP1-215ENST00000541108 CFHR2P36980 270 aa15.03■□□□□ -0
CLIP1-215ENST00000541108 GDNFP39905 211 aa15.03■□□□□ -0
CLIP1-215ENST00000541108 GATA4P43694 442 aa15.03■□□□□ -0
CLIP1-215ENST00000541108 AP3S2P59780 193 aa15.03■□□□□ -0
CLIP1-215ENST00000541108 DYRK1AQ13627 763 aa15.03■□□□□ -0
CLIP1-215ENST00000541108 OXA1LQ15070 435 aa15.03■□□□□ -0
CLIP1-215ENST00000541108 MPV17LQ2QL34 196 aa15.03■□□□□ -0
CLIP1-215ENST00000541108 PIGYQ3MUY2 71 aa15.03■□□□□ -0
CLIP1-215ENST00000541108 ZNF57Q68EA5 555 aaPredicted RBP15.03■□□□□ -0
CLIP1-215ENST00000541108 FAM58AQ8N1B3 248 aa15.03■□□□□ -0
CLIP1-215ENST00000541108 ARHGAP5-AS1Q96IT6 56 aa15.03■□□□□ -0
CLIP1-215ENST00000541108 DHRS9Q9BPW9 319 aa15.03■□□□□ -0
CLIP1-215ENST00000541108 NRIP2Q9BQI9 281 aa15.03■□□□□ -0
CLIP1-215ENST00000541108 PLEKHJ1Q9NW61 149 aa15.03■□□□□ -0
CLIP1-215ENST00000541108 B9A039 149 aa15.02□□□□□ -0.01
CLIP1-215ENST00000541108 ACTBP60709 375 aa15.02□□□□□ -0.01
CLIP1-215ENST00000541108 ACTG1P63261 375 aa15.02□□□□□ -0.01
CLIP1-215ENST00000541108 SIGIRRQ6IA17 410 aa15.02□□□□□ -0.01
CLIP1-215ENST00000541108 POC1AQ8NBT0 407 aa15.02□□□□□ -0.01
CLIP1-215ENST00000541108 ERGIC1Q969X5 290 aa15.02□□□□□ -0.01
CLIP1-215ENST00000541108 PIK3IP1Q96FE7 263 aa15.02□□□□□ -0.01
CLIP1-215ENST00000541108 NEDD4LQ96PU5 975 aa15.02□□□□□ -0.01
CLIP1-215ENST00000541108 OR2V2Q96R30 315 aa15.02□□□□□ -0.01
CLIP1-215ENST00000541108 ZNF107Q9UII5 783 aaPredicted RBP15.02□□□□□ -0.01
CLIP1-215ENST00000541108 ICE1Q9Y2F5 2266 aa15.02□□□□□ -0.01
CLIP1-215ENST00000541108 A6NLC8 198 aa15.01□□□□□ -0.01
CLIP1-215ENST00000541108 C17orf100A8MU93 164 aa15.01□□□□□ -0.01
CLIP1-215ENST00000541108 M0R233 179 aa15.01□□□□□ -0.01
CLIP1-215ENST00000541108 SPRY3O43610 288 aa15.01□□□□□ -0.01
CLIP1-215ENST00000541108 IGHV1-46P01743 117 aa15.01□□□□□ -0.01
CLIP1-215ENST00000541108 PMELP40967 661 aa15.01□□□□□ -0.01
CLIP1-215ENST00000541108 IL13RA2Q14627 380 aa15.01□□□□□ -0.01
CLIP1-215ENST00000541108 MPPED2Q15777 294 aa15.01□□□□□ -0.01
CLIP1-215ENST00000541108 ZNF672Q499Z4 452 aaPredicted RBP15.01□□□□□ -0.01
CLIP1-215ENST00000541108 WDR82Q6UXN9 313 aa15.01□□□□□ -0.01
CLIP1-215ENST00000541108 OR10Z1Q8NGY1 313 aa15.01□□□□□ -0.01
CLIP1-215ENST00000541108 LILRB1Q8NHL6 650 aaPredicted RBP15.01□□□□□ -0.01
CLIP1-215ENST00000541108 ST8SIA4Q92187 359 aa15.01□□□□□ -0.01
CLIP1-215ENST00000541108 GTF3AQ92664 365 aaKnown RBP15.01□□□□□ -0.01
CLIP1-215ENST00000541108 MEGF10Q96KG7 1140 aa15.01□□□□□ -0.01
CLIP1-215ENST00000541108 HS3ST6Q96QI5 342 aa15.01□□□□□ -0.01
CLIP1-215ENST00000541108 C7orf50Q9BRJ6 194 aaKnown RBP15.01□□□□□ -0.01
CLIP1-215ENST00000541108 PECRQ9BY49 303 aa15.01□□□□□ -0.01
CLIP1-215ENST00000541108 MS4A5Q9H3V2 200 aa15.01□□□□□ -0.01
CLIP1-215ENST00000541108 HES4Q9HCC6 221 aa15.01□□□□□ -0.01
CLIP1-215ENST00000541108 ANKRD20A5PA0PJZ0 165 aa15□□□□□ -0.01
CLIP1-215ENST00000541108 LYRM1O43325 122 aa15□□□□□ -0.01
CLIP1-215ENST00000541108 PLAUP00749 431 aa15□□□□□ -0.01
CLIP1-215ENST00000541108 CD55P08174 381 aa15□□□□□ -0.01
CLIP1-215ENST00000541108 PRKACAP17612 351 aa15□□□□□ -0.01
CLIP1-215ENST00000541108 FUT3P21217 361 aa15□□□□□ -0.01
CLIP1-215ENST00000541108 CHATP28329 748 aa15□□□□□ -0.01
CLIP1-215ENST00000541108 KLF9Q13886 244 aaPredicted RBP15□□□□□ -0.01
CLIP1-215ENST00000541108 TRIM16LQ309B1 348 aa15□□□□□ -0.01
CLIP1-215ENST00000541108 RNASE12Q5GAN4 147 aaKnown RBP15□□□□□ -0.01
CLIP1-215ENST00000541108 PRAMEF6Q5VXH4 476 aa15□□□□□ -0.01
CLIP1-215ENST00000541108 MZT2BQ6NZ67 158 aa15□□□□□ -0.01
CLIP1-215ENST00000541108 NEUROG1Q92886 237 aa15□□□□□ -0.01
CLIP1-215ENST00000541108 EMG1Q92979 244 aaKnown RBP15□□□□□ -0.01
CLIP1-215ENST00000541108 COX4I2Q96KJ9 171 aa15□□□□□ -0.01
CLIP1-215ENST00000541108 IFT22Q9H7X7 185 aa15□□□□□ -0.01
CLIP1-215ENST00000541108 SPACA1Q9HBV2 294 aa15□□□□□ -0.01
CLIP1-215ENST00000541108 CENPXA8MT69 81 aa15□□□□□ -0.01
CLIP1-215ENST00000541108 PDCD6O75340 191 aa15□□□□□ -0.01
CLIP1-215ENST00000541108 OR7C1O76099 320 aaPredicted RBP15□□□□□ -0.01
CLIP1-215ENST00000541108 CSF1P09603 554 aa15□□□□□ -0.01
CLIP1-215ENST00000541108 GNG2P59768 71 aa15□□□□□ -0.01
CLIP1-215ENST00000541108 TNFAIP6P98066 277 aaPredicted RBP15□□□□□ -0.01
CLIP1-215ENST00000541108 GUCA2AQ02747 115 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms