RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 DCTN6O00399 190 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 KPNA4O00629 521 aaPredicted RBP3.39□□□□□ -1.87
YBX3-210ENST00000540975 RFXANKO14593 260 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 RAB29O14966 203 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 KLRC4O43908 158 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 TPST2O60704 377 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 FKBP6O75344 327 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 AQP8O94778 261 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 CST1P01037 141 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 CD5P06127 495 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 ZNF806P0C7X5 589 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 ZNF823P16415 610 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 SPI1P17947 270 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 NPR2P20594 1047 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 SLC6A1P30531 599 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 CALCRP30988 508 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 FOXN2P32314 431 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 ARR3P36575 388 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 CSKP41240 450 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 IDH2P48735 452 aaKnown RBP3.39□□□□□ -1.87
YBX3-210ENST00000540975 ZNF136P52737 540 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 CRYBA4P53673 196 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 VSX2P58304 361 aaPredicted RBP3.39□□□□□ -1.87
YBX3-210ENST00000540975 TFAMQ00059 246 aaKnown RBP3.39□□□□□ -1.87
YBX3-210ENST00000540975 IL5RAQ01344 420 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 BST2Q10589 180 aaKnown RBP3.39□□□□□ -1.87
YBX3-210ENST00000540975 KRR1Q13601 381 aaKnown RBP3.39□□□□□ -1.87
YBX3-210ENST00000540975 RAB31Q13636 194 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 MICBQ29980 383 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 PTPN20Q4JDL3 420 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 C9orf64Q5T6V5 341 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 GPRC6AQ5T6X5 926 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 OGFRL1Q5TC84 451 aaPredicted RBP3.39□□□□□ -1.87
YBX3-210ENST00000540975 OR2G6Q5TZ20 316 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 FBXW9Q5XUX1 488 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 SLC8B1Q6J4K2 584 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 H3F3CQ6NXT2 135 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 ULK3Q6PHR2 472 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 TMEM107Q6UX40 140 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 TMEM144Q7Z5S9 345 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 TMEM135Q86UB9 458 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 ANGPTL5Q86XS5 388 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 RDH10Q8IZV5 341 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 C4orf33Q8N1A6 199 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 Q8N402 240 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 OR10W1Q8NGF6 305 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 PIGXQ8TBF5 258 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 STMN2Q93045 179 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 ISOC1Q96CN7 298 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 SMIM12Q96EX1 92 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 COQ2Q96H96 371 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 SH3YL1Q96HL8 342 aaPredicted RBP3.39□□□□□ -1.87
YBX3-210ENST00000540975 PPP3R2Q96LZ3 170 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 OR2V2Q96R30 315 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 SERPINI1Q99574 410 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 AIF1LQ9BQI0 150 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 DCUN1D5Q9BTE7 237 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 RSG1Q9BU20 258 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 MED18Q9BUE0 208 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 ZNF426Q9BUY5 554 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 NHEJ1Q9H9Q4 299 aaPredicted RBP3.39□□□□□ -1.87
YBX3-210ENST00000540975 RHOFQ9HBH0 211 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 RAB18Q9NP72 206 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 PLEKHJ1Q9NW61 149 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 BABAM2Q9NXR7 383 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 SLC25A37Q9NYZ2 338 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 GLTPQ9NZD2 209 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 LGALS13Q9UHV8 139 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 NXT1Q9UKK6 140 aaKnown RBP3.39□□□□□ -1.87
YBX3-210ENST00000540975 NPIPA1Q9UND3 350 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 KCNIP3Q9Y2W7 256 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 CSDC2Q9Y534 153 aaKnown RBP3.39□□□□□ -1.87
YBX3-210ENST00000540975 PLCH1Q4KWH8 1693 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 USP54Q70EL1 1684 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 TOPAZ1Q8N9V7 1692 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 PALLDQ8WX93 1383 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 ANKRD36CQ5JPF3 1778 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 NRXN3Q9Y4C0 1643 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 A0A0G2JMP0 313 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 A0A0X1KG70 313 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 DISC1C4P0D8 188 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 C9J4A7 227 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 DFFAO00273 331 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 RGS16O15492 202 aaPredicted RBP3.38□□□□□ -1.87
YBX3-210ENST00000540975 XRCC2O43543 280 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 PSTPIP1O43586 416 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 CXCL13O43927 109 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 PLIN3O60664 434 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 EDF1O60869 148 aaKnown RBP3.38□□□□□ -1.87
YBX3-210ENST00000540975 SPAG7O75391 227 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 VAPBO95292 243 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 HTR1AP08908 422 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 GTF2F2P13984 249 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 UCHL3P15374 230 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 MUC1P15941 1255 aaPredicted RBP3.38□□□□□ -1.87
YBX3-210ENST00000540975 NCK1P16333 377 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 NELFEP18615 380 aaKnown RBP3.38□□□□□ -1.87
YBX3-210ENST00000540975 CFHR2P36980 270 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 RBM34P42696 430 aaKnown RBP3.38□□□□□ -1.87
YBX3-210ENST00000540975 MAGEA12P43365 314 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms