RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 HMGN1P05114 100 aa21.44■■□□□ 1.02
CHFR-218ENST00000540963 ACTA2P62736 377 aa21.44■■□□□ 1.02
CHFR-218ENST00000540963 ACTG2P63267 376 aa21.44■■□□□ 1.02
CHFR-218ENST00000540963 ACTC1P68032 377 aa21.44■■□□□ 1.02
CHFR-218ENST00000540963 ACTA1P68133 377 aa21.44■■□□□ 1.02
CHFR-218ENST00000540963 CDK5Q00535 292 aa21.44■■□□□ 1.02
CHFR-218ENST00000540963 ROM1Q03395 351 aa21.44■■□□□ 1.02
CHFR-218ENST00000540963 COL10A1Q03692 680 aa21.44■■□□□ 1.02
CHFR-218ENST00000540963 ZNF829Q3KNS6 432 aaPredicted RBP21.44■■□□□ 1.02
CHFR-218ENST00000540963 ASCC1Q8N9N2 400 aaKnown RBP21.44■■□□□ 1.02
CHFR-218ENST00000540963 DPF1Q92782 380 aa21.44■■□□□ 1.02
CHFR-218ENST00000540963 EDDM3BP56851 147 aa21.43■■□□□ 1.02
CHFR-218ENST00000540963 ZNF679Q8IYX0 411 aa21.43■■□□□ 1.02
CHFR-218ENST00000540963 OR8H2Q8N162 312 aa21.43■■□□□ 1.02
CHFR-218ENST00000540963 BBS1Q8NFJ9 593 aa21.43■■□□□ 1.02
CHFR-218ENST00000540963 PKIBQ9C010 78 aa21.43■■□□□ 1.02
CHFR-218ENST00000540963 IGHV2-26A0A0B4J1V2 119 aa21.42■■□□□ 1.02
CHFR-218ENST00000540963 TCRBV3S1A0A5B6 114 aa21.42■■□□□ 1.02
CHFR-218ENST00000540963 SLC2A5P22732 501 aa21.42■■□□□ 1.02
CHFR-218ENST00000540963 IL24Q13007 206 aa21.42■■□□□ 1.02
CHFR-218ENST00000540963 TMEM236Q5W0B7 351 aa21.42■■□□□ 1.02
CHFR-218ENST00000540963 CPOQ8IVL8 374 aa21.42■■□□□ 1.02
CHFR-218ENST00000540963 NDNFQ8TB73 568 aa21.42■■□□□ 1.02
CHFR-218ENST00000540963 SESN1Q9Y6P5 492 aa21.42■■□□□ 1.02
CHFR-218ENST00000540963 hADV38S2A0JD32 116 aa21.41■■□□□ 1.02
CHFR-218ENST00000540963 DHRS7CA6NNS2 312 aa21.41■■□□□ 1.02
CHFR-218ENST00000540963 DYNC1I1O14576 645 aa21.41■■□□□ 1.02
CHFR-218ENST00000540963 OSMP13725 252 aa21.41■■□□□ 1.02
CHFR-218ENST00000540963 HTR1DP28221 377 aa21.41■■□□□ 1.02
CHFR-218ENST00000540963 LINC00482Q8N8I6 264 aa21.41■■□□□ 1.02
CHFR-218ENST00000540963 CAPSLQ8WWF8 208 aa21.41■■□□□ 1.02
CHFR-218ENST00000540963 ASB17Q8WXJ9 295 aa21.41■■□□□ 1.02
CHFR-218ENST00000540963 CLEC7AQ9BXN2 247 aa21.41■■□□□ 1.02
CHFR-218ENST00000540963 SEBOXQ9HB31 216 aaPredicted RBP21.41■■□□□ 1.02
CHFR-218ENST00000540963 POMPQ9Y244 141 aa21.41■■□□□ 1.02
CHFR-218ENST00000540963 LINC00312Q9Y6C7 94 aa21.41■■□□□ 1.02
CHFR-218ENST00000540963 TMEM14AQ9Y6G1 99 aa21.41■■□□□ 1.02
CHFR-218ENST00000540963 FKBP6O75344 327 aa21.4■■□□□ 1.02
CHFR-218ENST00000540963 TTRP02766 147 aa21.4■■□□□ 1.02
CHFR-218ENST00000540963 JUNBP17275 347 aaPredicted RBP21.4■■□□□ 1.02
CHFR-218ENST00000540963 RIDAP52758 137 aaKnown RBP21.4■■□□□ 1.02
CHFR-218ENST00000540963 RPS7P62081 194 aaKnown RBP21.4■■□□□ 1.02
CHFR-218ENST00000540963 ASRGL1Q7L266 308 aa21.4■■□□□ 1.02
CHFR-218ENST00000540963 TCF23Q7RTU1 214 aa21.4■■□□□ 1.02
CHFR-218ENST00000540963 ZNF676Q8N7Q3 588 aa21.4■■□□□ 1.02
CHFR-218ENST00000540963 SNX22Q96L94 193 aa21.4■■□□□ 1.02
CHFR-218ENST00000540963 TMEM133Q9H2Q1 129 aa21.4■■□□□ 1.02
CHFR-218ENST00000540963 MOB1AQ9H8S9 216 aa21.4■■□□□ 1.02
CHFR-218ENST00000540963 ZMAT5Q9UDW3 170 aaKnown RBP21.4■■□□□ 1.02
CHFR-218ENST00000540963 V9GYS6 101 aa21.4■■□□□ 1.02
CHFR-218ENST00000540963 BRS3P32247 399 aa21.39■■□□□ 1.01
CHFR-218ENST00000540963 ARHGDIBP52566 201 aa21.39■■□□□ 1.01
CHFR-218ENST00000540963 HCCSP53701 268 aa21.39■■□□□ 1.01
CHFR-218ENST00000540963 Q6ZSR3 168 aa21.39■■□□□ 1.01
CHFR-218ENST00000540963 MCRIP2Q9BUT9 160 aaKnown RBP21.39■■□□□ 1.01
CHFR-218ENST00000540963 GPR173Q9NS66 373 aa21.39■■□□□ 1.01
CHFR-218ENST00000540963 PRR32B1ATL7 298 aa21.38■■□□□ 1.01
CHFR-218ENST00000540963 PSMD9O00233 223 aa21.38■■□□□ 1.01
CHFR-218ENST00000540963 GNGT2O14610 69 aa21.38■■□□□ 1.01
CHFR-218ENST00000540963 CBX1P83916 185 aa21.38■■□□□ 1.01
CHFR-218ENST00000540963 SPATA24Q86W54 205 aa21.38■■□□□ 1.01
CHFR-218ENST00000540963 GYG2O15488 501 aa21.37■■□□□ 1.01
CHFR-218ENST00000540963 LPLP06858 475 aa21.37■■□□□ 1.01
CHFR-218ENST00000540963 HOXD3P31249 432 aaPredicted RBP21.37■■□□□ 1.01
CHFR-218ENST00000540963 FLOT2Q14254 428 aa21.37■■□□□ 1.01
CHFR-218ENST00000540963 OR51D1Q8NGF3 324 aa21.37■■□□□ 1.01
CHFR-218ENST00000540963 OR4P4Q8NGL7 312 aa21.37■■□□□ 1.01
CHFR-218ENST00000540963 BCAS4Q8TDM0 211 aa21.37■■□□□ 1.01
CHFR-218ENST00000540963 UTP4Q969X6 686 aaKnown RBP21.37■■□□□ 1.01
CHFR-218ENST00000540963 TEX12Q9BXU0 123 aa21.37■■□□□ 1.01
CHFR-218ENST00000540963 CADM1Q9BY67 442 aaKnown RBP21.37■■□□□ 1.01
CHFR-218ENST00000540963 SLC25A19Q9HC21 320 aa21.37■■□□□ 1.01
CHFR-218ENST00000540963 DPM3Q9P2X0 92 aa21.37■■□□□ 1.01
CHFR-218ENST00000540963 SRSF10O75494 262 aaKnown RBP21.36■■□□□ 1.01
CHFR-218ENST00000540963 OR2F2O95006 317 aa21.36■■□□□ 1.01
CHFR-218ENST00000540963 NHLRC4P0CG21 123 aaPredicted RBP21.36■■□□□ 1.01
CHFR-218ENST00000540963 MFGE8Q08431 387 aaPredicted RBP21.36■■□□□ 1.01
CHFR-218ENST00000540963 APOFQ13790 326 aa21.36■■□□□ 1.01
CHFR-218ENST00000540963 ABCA11PQ4W5N1 156 aa21.36■■□□□ 1.01
CHFR-218ENST00000540963 ANGPTL5Q86XS5 388 aa21.36■■□□□ 1.01
CHFR-218ENST00000540963 ELMOD2Q8IZ81 293 aa21.36■■□□□ 1.01
CHFR-218ENST00000540963 BATF2Q8N1L9 274 aa21.36■■□□□ 1.01
CHFR-218ENST00000540963 OR14K1Q8NGZ2 314 aa21.36■■□□□ 1.01
CHFR-218ENST00000540963 STMN2Q93045 179 aa21.36■■□□□ 1.01
CHFR-218ENST00000540963 CEP19Q96LK0 163 aa21.36■■□□□ 1.01
CHFR-218ENST00000540963 RBM14Q96PK6 669 aaKnown RBP21.36■■□□□ 1.01
CHFR-218ENST00000540963 SLC25A33Q9BSK2 321 aa21.36■■□□□ 1.01
CHFR-218ENST00000540963 MEX3AA1L020 520 aaKnown RBP21.35■■□□□ 1.01
CHFR-218ENST00000540963 CCDC182A6NF36 153 aa21.35■■□□□ 1.01
CHFR-218ENST00000540963 LOC110117498-PIK3R3F6TDL0 507 aa21.35■■□□□ 1.01
CHFR-218ENST00000540963 M0QZK8 103 aa21.35■■□□□ 1.01
CHFR-218ENST00000540963 ANXA8P13928 327 aa21.35■■□□□ 1.01
CHFR-218ENST00000540963 DAPP51397 102 aa21.35■■□□□ 1.01
CHFR-218ENST00000540963 ESRRGP62508 458 aa21.35■■□□□ 1.01
CHFR-218ENST00000540963 DNAL1Q4LDG9 190 aa21.35■■□□□ 1.01
CHFR-218ENST00000540963 KHDC1LQ5JSQ8 128 aa21.35■■□□□ 1.01
CHFR-218ENST00000540963 OR52W1Q6IF63 320 aa21.35■■□□□ 1.01
CHFR-218ENST00000540963 RTN4RL2Q86UN3 420 aa21.35■■□□□ 1.01
CHFR-218ENST00000540963 MRPL41Q8IXM3 137 aaKnown RBP21.35■■□□□ 1.01
CHFR-218ENST00000540963 OSR2Q8N2R0 312 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms