RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 SYNGR1O43759 233 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 NOS1APO75052 506 aaPredicted RBP5.85□□□□□ -1.47
YBX3-209ENST00000540747 GASTP01350 101 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 CCDC159P0C7I6 412 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 PGA5P0DJD9 388 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 CD33P20138 364 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 PAICSP22234 425 aaKnown RBP5.85□□□□□ -1.47
YBX3-209ENST00000540747 CRHBPP24387 322 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 POU1F1P28069 291 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 HSD11B1P28845 292 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 MAGEA2P43356 314 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 GABRA2P47869 451 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 GPM6AP51674 278 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 GNG3P63215 75 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 COL10A1Q03692 680 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 TMED1Q13445 227 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 GFOD2Q3B7J2 385 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 CEACAM21Q3KPI0 293 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 ZNF691Q5VV52 312 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 ZNF782Q6ZMW2 699 aaPredicted RBP5.85□□□□□ -1.47
YBX3-209ENST00000540747 ETV3LQ6ZN32 361 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 TCF23Q7RTU1 214 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 SPARTQ8N0X7 666 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 SVOPQ8N4V2 548 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 ZNF561Q8N587 486 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 LINC00482Q8N8I6 264 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 BPIFB6Q8NFQ5 453 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 OR8B12Q8NGG6 310 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 OR13F1Q8NGS4 319 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 OR6K6Q8NGW6 343 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 OR6N2Q8NGY6 317 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 OTOSQ8NHW6 89 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 FAM81AQ8TBF8 368 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 RPS4Y2Q8TD47 263 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 RAB2BQ8WUD1 216 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 BORCS5Q969J3 196 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 ITFG2Q969R8 447 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 MALSU1Q96EH3 234 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 PGAM5Q96HS1 289 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 OR8B4Q96RC9 309 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 INTS14Q96SY0 518 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 NRIP2Q9BQI9 281 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 TSSK6Q9BXA6 273 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 GABARAPL1Q9H0R8 117 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 REEP1Q9H902 201 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 HES4Q9HCC6 221 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 CMC2Q9NRP2 79 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 RASL12Q9NYN1 266 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 PITPNC1Q9UKF7 332 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 BAIAP2Q9UQB8 552 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 KLHDC2Q9Y2U9 406 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 GMPPBQ9Y5P6 360 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 A0A0U1RQV5 110 aa5.84□□□□□ -1.47
YBX3-209ENST00000540747 A0A1W2PRX2 142 aa5.84□□□□□ -1.47
YBX3-209ENST00000540747 OR5B21A6NL26 309 aa5.84□□□□□ -1.47
YBX3-209ENST00000540747 ZNF732B4DXR9 585 aa5.84□□□□□ -1.47
YBX3-209ENST00000540747 MRPS14O60783 128 aaKnown RBP5.84□□□□□ -1.47
YBX3-209ENST00000540747 ZNF737O75373 536 aa5.84□□□□□ -1.47
YBX3-209ENST00000540747 GLCEO94923 617 aa5.84□□□□□ -1.47
YBX3-209ENST00000540747 DUS4LO95620 317 aaKnown RBP5.84□□□□□ -1.47
YBX3-209ENST00000540747 ALDOBP05062 364 aa5.84□□□□□ -1.47
YBX3-209ENST00000540747 MPZP25189 248 aa5.84□□□□□ -1.47
YBX3-209ENST00000540747 PRDX2P32119 198 aa5.84□□□□□ -1.47
YBX3-209ENST00000540747 POLR2IP36954 125 aaKnown RBP5.84□□□□□ -1.47
YBX3-209ENST00000540747 RANBP1P43487 201 aa5.84□□□□□ -1.47
YBX3-209ENST00000540747 VDAC2P45880 294 aaPredicted RBP5.84□□□□□ -1.47
YBX3-209ENST00000540747 CEBPDP49716 269 aaPredicted RBP5.84□□□□□ -1.47
YBX3-209ENST00000540747 LGALS4P56470 323 aa5.84□□□□□ -1.47
YBX3-209ENST00000540747 ISL1P61371 349 aa5.84□□□□□ -1.47
YBX3-209ENST00000540747 ERVK11-1P61568 191 aa5.84□□□□□ -1.47
YBX3-209ENST00000540747 SLC35A2P78381 396 aa5.84□□□□□ -1.47
YBX3-209ENST00000540747 PPP1R8Q12972 351 aaKnown RBP5.84□□□□□ -1.47
YBX3-209ENST00000540747 SMIM21Q3B7S5 101 aa5.84□□□□□ -1.47
YBX3-209ENST00000540747 PLA1AQ53H76 456 aa5.84□□□□□ -1.47
YBX3-209ENST00000540747 TMEM42Q69YG0 159 aa5.84□□□□□ -1.47
YBX3-209ENST00000540747 CD300LDQ6UXZ3 194 aa5.84□□□□□ -1.47
YBX3-209ENST00000540747 SHFQ7M4L6 423 aa5.84□□□□□ -1.47
YBX3-209ENST00000540747 TMEM179BQ7Z7N9 219 aa5.84□□□□□ -1.47
YBX3-209ENST00000540747 HS3ST5Q8IZT8 346 aa5.84□□□□□ -1.47
YBX3-209ENST00000540747 LINC00471Q8N535 108 aa5.84□□□□□ -1.47
YBX3-209ENST00000540747 ZNF454Q8N9F8 522 aa5.84□□□□□ -1.47
YBX3-209ENST00000540747 OR2T33Q8NG76 320 aa5.84□□□□□ -1.47
YBX3-209ENST00000540747 OR5AU1Q8NGC0 362 aa5.84□□□□□ -1.47
YBX3-209ENST00000540747 OR5A2Q8NGI9 324 aa5.84□□□□□ -1.47
YBX3-209ENST00000540747 ZNF671Q8TAW3 534 aa5.84□□□□□ -1.47
YBX3-209ENST00000540747 PIGCQ92535 297 aa5.84□□□□□ -1.47
YBX3-209ENST00000540747 PPP1R14BQ96C90 147 aa5.84□□□□□ -1.47
YBX3-209ENST00000540747 ZNF488Q96MN9 340 aa5.84□□□□□ -1.47
YBX3-209ENST00000540747 OR5M11Q96RB7 305 aa5.84□□□□□ -1.47
YBX3-209ENST00000540747 DGCR6LQ9BY27 220 aa5.84□□□□□ -1.47
YBX3-209ENST00000540747 MED20Q9H944 212 aa5.84□□□□□ -1.47
YBX3-209ENST00000540747 BRD7Q9NPI1 651 aa5.84□□□□□ -1.47
YBX3-209ENST00000540747 KRT84Q9NSB2 600 aa5.84□□□□□ -1.47
YBX3-209ENST00000540747 FAM206AQ9NX38 181 aa5.84□□□□□ -1.47
YBX3-209ENST00000540747 VNN3Q9NY84 501 aa5.84□□□□□ -1.47
YBX3-209ENST00000540747 SAMHD1Q9Y3Z3 626 aaKnown RBP5.84□□□□□ -1.47
YBX3-209ENST00000540747 U3KQV3 271 aa5.84□□□□□ -1.47
YBX3-209ENST00000540747 DSCAML1Q8TD84 2053 aa5.84□□□□□ -1.47
YBX3-209ENST00000540747 hCG_2014768A0A024R1R8 64 aa5.83□□□□□ -1.48
YBX3-209ENST00000540747 hCG_1809904A0A1W2PP81 198 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms