RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 RIPK1Q13546 671 aa15.08■□□□□ 0
SNRPA1-203ENST00000540017 IZUMO2Q6UXV1 221 aa15.08■□□□□ 0
SNRPA1-203ENST00000540017 SERPINA12Q8IW75 414 aa15.08■□□□□ 0
SNRPA1-203ENST00000540017 PHC2Q8IXK0 858 aa15.08■□□□□ 0
SNRPA1-203ENST00000540017 BPIFB2Q8N4F0 458 aa15.08■□□□□ 0
SNRPA1-203ENST00000540017 TMEM185AQ8NFB2 350 aa15.08■□□□□ 0
SNRPA1-203ENST00000540017 OR5D14Q8NGL3 314 aa15.08■□□□□ 0
SNRPA1-203ENST00000540017 ZNF418Q8TF45 676 aaPredicted RBP15.08■□□□□ 0
SNRPA1-203ENST00000540017 TMEM158Q8WZ71 300 aa15.08■□□□□ 0
SNRPA1-203ENST00000540017 SMIM19Q96E16 107 aa15.08■□□□□ 0
SNRPA1-203ENST00000540017 ZNF48Q96MX3 618 aaPredicted RBP15.08■□□□□ 0
SNRPA1-203ENST00000540017 PAK1IP1Q9NWT1 392 aaPredicted RBP15.08■□□□□ 0
SNRPA1-203ENST00000540017 OR14J1Q9UGF5 321 aa15.08■□□□□ 0
SNRPA1-203ENST00000540017 ANGPTL7O43827 346 aa15.07■□□□□ 0
SNRPA1-203ENST00000540017 KNG1P01042 644 aa15.07■□□□□ 0
SNRPA1-203ENST00000540017 RPSAP08865 295 aaKnown RBP15.07■□□□□ 0
SNRPA1-203ENST00000540017 CALCBP10092 127 aa15.07■□□□□ 0
SNRPA1-203ENST00000540017 BCL3P20749 454 aa15.07■□□□□ 0
SNRPA1-203ENST00000540017 FPR2P25090 351 aa15.07■□□□□ 0
SNRPA1-203ENST00000540017 HILS1P60008 231 aa15.07■□□□□ 0
SNRPA1-203ENST00000540017 ZNF529Q6P280 563 aa15.07■□□□□ 0
SNRPA1-203ENST00000540017 BRD3OSQ6XYD6 125 aa15.07■□□□□ 0
SNRPA1-203ENST00000540017 USP43Q70EL4 1123 aa15.07■□□□□ 0
SNRPA1-203ENST00000540017 NANOGP1Q8N7R0 232 aa15.07■□□□□ 0
SNRPA1-203ENST00000540017 OR51A2Q8NGJ7 313 aa15.07■□□□□ 0
SNRPA1-203ENST00000540017 OR5D18Q8NGL1 313 aa15.07■□□□□ 0
SNRPA1-203ENST00000540017 GPR148Q8TDV2 347 aa15.07■□□□□ 0
SNRPA1-203ENST00000540017 GHSRQ92847 366 aa15.07■□□□□ 0
SNRPA1-203ENST00000540017 ORAI1Q96D31 301 aa15.07■□□□□ 0
SNRPA1-203ENST00000540017 PGLYRP3Q96LB9 341 aa15.07■□□□□ 0
SNRPA1-203ENST00000540017 ANKRD60Q9BZ19 345 aa15.07■□□□□ 0
SNRPA1-203ENST00000540017 ESM1Q9NQ30 184 aa15.07■□□□□ 0
SNRPA1-203ENST00000540017 RBFOX1Q9NWB1 397 aaKnown RBP15.07■□□□□ 0
SNRPA1-203ENST00000540017 ONECUT1Q9UBC0 465 aa15.07■□□□□ 0
SNRPA1-203ENST00000540017 ZNF281Q9Y2X9 895 aa15.07■□□□□ 0
SNRPA1-203ENST00000540017 A0A0A6YYJ9 748 aa15.06■□□□□ 0
SNRPA1-203ENST00000540017 CENPVL3A0A0U1RRI6 287 aa15.06■□□□□ 0
SNRPA1-203ENST00000540017 PTGES3LE9PB15 166 aa15.06■□□□□ 0
SNRPA1-203ENST00000540017 SULT1B1O43704 296 aa15.06■□□□□ 0
SNRPA1-203ENST00000540017 ALX3O95076 343 aa15.06■□□□□ 0
SNRPA1-203ENST00000540017 CDK1P06493 297 aa15.06■□□□□ 0
SNRPA1-203ENST00000540017 OCM2P0CE71 109 aa15.06■□□□□ 0
SNRPA1-203ENST00000540017 OCMP0CE72 109 aaPredicted RBP15.06■□□□□ 0
SNRPA1-203ENST00000540017 DLX1P56177 255 aa15.06■□□□□ 0
SNRPA1-203ENST00000540017 RPS11P62280 158 aaKnown RBP eCLIP15.06■□□□□ 0
SNRPA1-203ENST00000540017 METTL11BQ5VVY1 283 aa15.06■□□□□ 0
SNRPA1-203ENST00000540017 RUSC1-AS1Q66K80 236 aa15.06■□□□□ 0
SNRPA1-203ENST00000540017 MKXQ8IYA7 352 aa15.06■□□□□ 0
SNRPA1-203ENST00000540017 ZNF561Q8N587 486 aa15.06■□□□□ 0
SNRPA1-203ENST00000540017 Q8N7P7 452 aa15.06■□□□□ 0
SNRPA1-203ENST00000540017 SIGLECL1Q8N7X8 197 aa15.06■□□□□ 0
SNRPA1-203ENST00000540017 SUCNR1Q9BXA5 334 aa15.06■□□□□ 0
SNRPA1-203ENST00000540017 MS4A7Q9GZW8 240 aaPredicted RBP15.06■□□□□ 0
SNRPA1-203ENST00000540017 VCX3BQ9H321 246 aa15.06■□□□□ 0
SNRPA1-203ENST00000540017 TAS2R4Q9NYW5 299 aa15.06■□□□□ 0
SNRPA1-203ENST00000540017 PCDHGB5Q9Y5G0 923 aa15.06■□□□□ 0
SNRPA1-203ENST00000540017 TRBV5-5A0A0J9YX44 114 aa15.05■□□□□ -0
SNRPA1-203ENST00000540017 PNMA8CA0A1B0GUJ8 204 aa15.05■□□□□ -0
SNRPA1-203ENST00000540017 CAPZA1P52907 286 aa15.05■□□□□ -0
SNRPA1-203ENST00000540017 WNT4P56705 351 aa15.05■□□□□ -0
SNRPA1-203ENST00000540017 ZP1P60852 638 aa15.05■□□□□ -0
SNRPA1-203ENST00000540017 COL10A1Q03692 680 aa15.05■□□□□ -0
SNRPA1-203ENST00000540017 PRB3Q04118 309 aaPredicted RBP15.05■□□□□ -0
SNRPA1-203ENST00000540017 KISS1Q15726 138 aa15.05■□□□□ -0
SNRPA1-203ENST00000540017 C9orf139Q6ZV77 190 aa15.05■□□□□ -0
SNRPA1-203ENST00000540017 VMO1Q7Z5L0 202 aa15.05■□□□□ -0
SNRPA1-203ENST00000540017 ZDHHC22Q8N966 263 aa15.05■□□□□ -0
SNRPA1-203ENST00000540017 EMG1Q92979 244 aaKnown RBP15.05■□□□□ -0
SNRPA1-203ENST00000540017 TMEM106AQ96A25 262 aa15.05■□□□□ -0
SNRPA1-203ENST00000540017 NKX3-1Q99801 234 aaPredicted RBP15.05■□□□□ -0
SNRPA1-203ENST00000540017 C19orf24Q9BVV8 132 aa15.05■□□□□ -0
SNRPA1-203ENST00000540017 C19orf12Q9NSK7 152 aa15.05■□□□□ -0
SNRPA1-203ENST00000540017 KPTNQ9Y664 436 aa15.05■□□□□ -0
SNRPA1-203ENST00000540017 MDFIC2A0A1B0GVS7 189 aa15.04■□□□□ -0
SNRPA1-203ENST00000540017 MYL12BO14950 172 aa15.04■□□□□ -0
SNRPA1-203ENST00000540017 ZNF737O75373 536 aa15.04■□□□□ -0
SNRPA1-203ENST00000540017 TK1P04183 234 aa15.04■□□□□ -0
SNRPA1-203ENST00000540017 HCKP08631 526 aa15.04■□□□□ -0
SNRPA1-203ENST00000540017 DUSP1P28562 367 aa15.04■□□□□ -0
SNRPA1-203ENST00000540017 SLC35A2P78381 396 aa15.04■□□□□ -0
SNRPA1-203ENST00000540017 PDZD9Q8IXQ8 264 aa15.04■□□□□ -0
SNRPA1-203ENST00000540017 FAM58AQ8N1B3 248 aa15.04■□□□□ -0
SNRPA1-203ENST00000540017 KIR3DL3Q8N743 410 aa15.04■□□□□ -0
SNRPA1-203ENST00000540017 LHX4Q969G2 390 aa15.04■□□□□ -0
SNRPA1-203ENST00000540017 DMRTB1Q96MA1 342 aa15.04■□□□□ -0
SNRPA1-203ENST00000540017 TMEM82A0PJX8 343 aa15.03■□□□□ -0
SNRPA1-203ENST00000540017 K7N7A8 449 aa15.03■□□□□ -0
SNRPA1-203ENST00000540017 KDM4BO94953 1096 aa15.03■□□□□ -0
SNRPA1-203ENST00000540017 CYB5AP00167 134 aa15.03■□□□□ -0
SNRPA1-203ENST00000540017 PRKACAP17612 351 aa15.03■□□□□ -0
SNRPA1-203ENST00000540017 RAB3AP20336 220 aa15.03■□□□□ -0
SNRPA1-203ENST00000540017 SNU13P55769 128 aaKnown RBP15.03■□□□□ -0
SNRPA1-203ENST00000540017 GPR157Q5UAW9 335 aa15.03■□□□□ -0
SNRPA1-203ENST00000540017 RNLSQ5VYX0 342 aa15.03■□□□□ -0
SNRPA1-203ENST00000540017 Q8IYB0 196 aa15.03■□□□□ -0
SNRPA1-203ENST00000540017 OR4M1Q8NGD0 313 aa15.03■□□□□ -0
SNRPA1-203ENST00000540017 OR52N4Q8NGI2 321 aa15.03■□□□□ -0
SNRPA1-203ENST00000540017 C1orf147Q96MC9 270 aaPredicted RBP15.03■□□□□ -0
SNRPA1-203ENST00000540017 OR5M11Q96RB7 305 aa15.03■□□□□ -0
SNRPA1-203ENST00000540017 CDCA4Q9BXL8 241 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms