RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 PRDX4Q13162 271 aa14.51□□□□□ -0.09
COPS3-212ENST00000539941 KLF9Q13886 244 aaPredicted RBP14.51□□□□□ -0.09
COPS3-212ENST00000539941 IGSF11Q5DX21 431 aa14.51□□□□□ -0.09
COPS3-212ENST00000539941 RNASE12Q5GAN4 147 aaKnown RBP14.51□□□□□ -0.09
COPS3-212ENST00000539941 ASCL4Q6XD76 172 aa14.51□□□□□ -0.09
COPS3-212ENST00000539941 ZDHHC23Q8IYP9 409 aa14.51□□□□□ -0.09
COPS3-212ENST00000539941 PIAS4Q8N2W9 510 aaPredicted RBP14.51□□□□□ -0.09
COPS3-212ENST00000539941 STPG2Q8N412 459 aa14.51□□□□□ -0.09
COPS3-212ENST00000539941 VKORC1Q9BQB6 163 aa14.51□□□□□ -0.09
COPS3-212ENST00000539941 LPAR5Q9H1C0 372 aa14.51□□□□□ -0.09
COPS3-212ENST00000539941 BIN3Q9NQY0 253 aa14.51□□□□□ -0.09
COPS3-212ENST00000539941 ELOVL5Q9NYP7 299 aa14.51□□□□□ -0.09
COPS3-212ENST00000539941 MTFP1Q9UDX5 166 aa14.51□□□□□ -0.09
COPS3-212ENST00000539941 PURGQ9UJV8 347 aaKnown RBP14.51□□□□□ -0.09
COPS3-212ENST00000539941 ANKRD30BLA7E2S9 258 aa14.5□□□□□ -0.09
COPS3-212ENST00000539941 CRTAPO75718 401 aaPredicted RBP14.5□□□□□ -0.09
COPS3-212ENST00000539941 AGFG2O95081 481 aa14.5□□□□□ -0.09
COPS3-212ENST00000539941 CECR9P0C854 216 aa14.5□□□□□ -0.09
COPS3-212ENST00000539941 PLA2G2AP14555 144 aa14.5□□□□□ -0.09
COPS3-212ENST00000539941 RAC2P15153 192 aa14.5□□□□□ -0.09
COPS3-212ENST00000539941 SELEP16581 610 aa14.5□□□□□ -0.09
COPS3-212ENST00000539941 BMP5P22003 454 aa14.5□□□□□ -0.09
COPS3-212ENST00000539941 RAD52P43351 418 aa14.5□□□□□ -0.09
COPS3-212ENST00000539941 CASP6P55212 293 aa14.5□□□□□ -0.09
COPS3-212ENST00000539941 RPS27AP62979 156 aaKnown RBP14.5□□□□□ -0.09
COPS3-212ENST00000539941 FGL1Q08830 312 aa14.5□□□□□ -0.09
COPS3-212ENST00000539941 SLC22A6Q4U2R8 563 aa14.5□□□□□ -0.09
COPS3-212ENST00000539941 DMRTC1Q5HYR2 192 aa14.5□□□□□ -0.09
COPS3-212ENST00000539941 ACBD4Q8NC06 268 aa14.5□□□□□ -0.09
COPS3-212ENST00000539941 ST6GALNAC3Q8NDV1 305 aa14.5□□□□□ -0.09
COPS3-212ENST00000539941 TMEM104Q8NE00 496 aa14.5□□□□□ -0.09
COPS3-212ENST00000539941 PXT1Q8NFP0 134 aa14.5□□□□□ -0.09
COPS3-212ENST00000539941 OR5D18Q8NGL1 313 aa14.5□□□□□ -0.09
COPS3-212ENST00000539941 OR10R2Q8NGX6 335 aa14.5□□□□□ -0.09
COPS3-212ENST00000539941 GCDHQ92947 438 aaPredicted RBP14.5□□□□□ -0.09
COPS3-212ENST00000539941 S100PBPQ96BU1 408 aa14.5□□□□□ -0.09
COPS3-212ENST00000539941 MUCL1Q96DR8 90 aa14.5□□□□□ -0.09
COPS3-212ENST00000539941 TAS2R8Q9NYW2 309 aa14.5□□□□□ -0.09
COPS3-212ENST00000539941 MBD2Q9UBB5 411 aa14.5□□□□□ -0.09
COPS3-212ENST00000539941 TLN1Q9Y490 2541 aaKnown RBP14.5□□□□□ -0.09
COPS3-212ENST00000539941 IGKV1-27A0A075B6S5 117 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 EEF1E1-BLOC1S5C9J1V9 151 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 RBBP9O75884 186 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 TMEM225BP0DP42 221 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 MEOX2P50222 304 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 RAB13P51153 203 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 CEACAM21Q3KPI0 293 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 SSX8Q7RTT4 187 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 C1QL2Q7Z5L3 287 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 FAM89BQ8N5H3 189 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 ZSCAN4Q8NAM6 433 aaPredicted RBP14.49□□□□□ -0.09
COPS3-212ENST00000539941 OR56B1Q8NGI3 324 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 GPX8Q8TED1 209 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 AQP3Q92482 292 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 DMRTA2Q96SC8 542 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 TM2D1Q9BX74 207 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 BCL2L14Q9BZR8 327 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 DNTTIP1Q9H147 329 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 METTL9Q9H1A3 318 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 COA4Q9NYJ1 87 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 IL36GQ9NZH8 169 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 MRPL15Q9P015 296 aaKnown RBP14.49□□□□□ -0.09
COPS3-212ENST00000539941 JKAMPQ9P055 326 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 GPR160Q9UJ42 338 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 IGHV1-18A0A0C4DH31 117 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 ANKRD20A5PA0PJZ0 165 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 NAP1L6A6NFF2 107 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 DNASE2O00115 360 aaPredicted RBP14.49□□□□□ -0.09
COPS3-212ENST00000539941 GATCO43716 136 aaKnown RBP14.49□□□□□ -0.09
COPS3-212ENST00000539941 TCRBP04435 133 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 LPLP06858 475 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 MELTFP08582 738 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 MGMTP16455 207 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 HAAOP46952 286 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 SRP9P49458 86 aaKnown RBP14.49□□□□□ -0.09
COPS3-212ENST00000539941 ACTBP60709 375 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 ACTG1P63261 375 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 MOGAT2Q3SYC2 334 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 MTFR2Q6P444 385 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 BTN2A1Q7KYR7 527 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 OR4D10Q8NGI6 311 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 OR5A2Q8NGI9 324 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 OR56B4Q8NH76 319 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 HIST1H2AAQ96QV6 131 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 GAL3ST1Q99999 423 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 C1QTNF6Q9BXI9 259 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 OR10A4Q9H209 315 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 OR51B6Q9H340 312 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 KLK11Q9UBX7 282 aa14.49□□□□□ -0.09
COPS3-212ENST00000539941 NOP16Q9Y3C1 178 aaKnown RBP14.49□□□□□ -0.09
COPS3-212ENST00000539941 OR5B21A6NL26 309 aa14.48□□□□□ -0.09
COPS3-212ENST00000539941 CFDP00746 253 aaPredicted RBP14.48□□□□□ -0.09
COPS3-212ENST00000539941 NMBP08949 121 aa14.48□□□□□ -0.09
COPS3-212ENST00000539941 PTHLHP12272 177 aa14.48□□□□□ -0.09
COPS3-212ENST00000539941 VEGFCP49767 419 aa14.48□□□□□ -0.09
COPS3-212ENST00000539941 PDZK1IP1Q13113 114 aa14.48□□□□□ -0.09
COPS3-212ENST00000539941 RSU1Q15404 277 aa14.48□□□□□ -0.09
COPS3-212ENST00000539941 ZNF260Q3ZCT1 412 aa14.48□□□□□ -0.09
COPS3-212ENST00000539941 OR1J1Q8NGS3 322 aa14.48□□□□□ -0.09
COPS3-212ENST00000539941 SLC25A40Q8TBP6 338 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms