RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 IGLV3-1P01715 115 aa10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 RNF224P0DH78 156 aa10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 SULT1A2P50226 295 aa10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 TAS2R31P59538 309 aa10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 ZNF468Q5VIY5 522 aaPredicted RBP10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 ZNF600Q6ZNG1 722 aa10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 IMMP1LQ96LU5 166 aa10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 NUDT16L1Q9BRJ7 211 aaKnown RBP10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 CNTNAP3Q9BZ76 1288 aa10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 LIME1Q9H400 295 aa10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 SIT1Q9Y3P8 196 aa10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 MFNGO00587 321 aa10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 UBE2CO00762 179 aa10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 HPNP05981 417 aa10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 S100A12P80511 92 aa10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 HAGHQ16775 308 aa10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 MEX3BQ6ZN04 569 aaKnown RBP10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 SKA3Q8IX90 412 aa10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 C15orf54Q8N8G6 183 aa10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 OR5L1Q8NGL2 311 aa10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 FNDC9Q8TBE3 224 aa10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 HLA-CQ95604 372 aa10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 LOC102723996A0A087X1L8 192 aa10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 FOXI3A8MTJ6 420 aaPredicted RBP10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 KLK3P07288 261 aaPredicted RBP10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 TMEM225BP0DP42 221 aa10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 COX6A1P12074 109 aa10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 FCGR2AP12318 317 aa10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 NTF4P34130 210 aa10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 PLA2G5P39877 138 aa10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 HNF4GQ14541 408 aa10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 TAF9Q16594 264 aa10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 OR2B11Q5JQS5 317 aa10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 TMEM156Q8N614 296 aa10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 OR52M1Q8NGK5 317 aa10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 OR11L1Q8NGX0 322 aa10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 KCNG3Q8TAE7 436 aa10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 PRRX2Q99811 253 aa10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 PIGQQ9BRB3 760 aa10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 FAAP24Q9BTP7 215 aa10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 PAPOLGQ9BWT3 736 aaKnown RBP10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 OR10A2Q9H208 303 aa10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 PRO1933Q9H354 126 aa10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 C19orf25Q9UFG5 118 aaPredicted RBP10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 PILRBQ9UKJ0 227 aa10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 C14orf166Q9Y224 244 aaKnown RBP10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 MT-ND4LP03901 98 aa10.94□□□□□ -0.66
SFSWAP-208ENST00000539506 HEXAP06865 529 aa10.94□□□□□ -0.66
SFSWAP-208ENST00000539506 CHRM2P08172 466 aa10.94□□□□□ -0.66
SFSWAP-208ENST00000539506 RPS2P15880 293 aaKnown RBP10.94□□□□□ -0.66
SFSWAP-208ENST00000539506 HAAOP46952 286 aa10.94□□□□□ -0.66
SFSWAP-208ENST00000539506 SLC35A1P78382 337 aa10.94□□□□□ -0.66
SFSWAP-208ENST00000539506 KIAA0141Q14154 515 aaPredicted RBP10.94□□□□□ -0.66
SFSWAP-208ENST00000539506 KISS1Q15726 138 aa10.94□□□□□ -0.66
SFSWAP-208ENST00000539506 DOK3Q7L591 496 aa10.94□□□□□ -0.66
SFSWAP-208ENST00000539506 ZIC4Q8N9L1 334 aa10.94□□□□□ -0.66
SFSWAP-208ENST00000539506 ZFP62Q8NB50 900 aaPredicted RBP10.94□□□□□ -0.66
SFSWAP-208ENST00000539506 IFI44Q8TCB0 444 aa10.94□□□□□ -0.66
SFSWAP-208ENST00000539506 GGACTQ9BVM4 153 aa10.94□□□□□ -0.66
SFSWAP-208ENST00000539506 HS3ST3B1Q9Y662 390 aa10.94□□□□□ -0.66
SFSWAP-208ENST00000539506 DIDO1Q9BTC0 2240 aaKnown RBP10.94□□□□□ -0.66
SFSWAP-208ENST00000539506 PATE3B3GLJ2 98 aa10.94□□□□□ -0.66
SFSWAP-208ENST00000539506 SPRY1O43609 319 aaPredicted RBP10.94□□□□□ -0.66
SFSWAP-208ENST00000539506 CST4P01036 141 aa10.94□□□□□ -0.66
SFSWAP-208ENST00000539506 IFNA2P01563 188 aa10.94□□□□□ -0.66
SFSWAP-208ENST00000539506 FGF5P12034 268 aa10.94□□□□□ -0.66
SFSWAP-208ENST00000539506 GLP1RP43220 463 aa10.94□□□□□ -0.66
SFSWAP-208ENST00000539506 PNLIPRP3Q17RR3 467 aa10.94□□□□□ -0.66
SFSWAP-208ENST00000539506 RPUSD3Q6P087 351 aaKnown RBP10.94□□□□□ -0.66
SFSWAP-208ENST00000539506 FAHD2BQ6P2I3 314 aaPredicted RBP10.94□□□□□ -0.66
SFSWAP-208ENST00000539506 SULF2Q8IWU5 870 aa10.94□□□□□ -0.66
SFSWAP-208ENST00000539506 SAT2Q96F10 170 aaPredicted RBP10.94□□□□□ -0.66
SFSWAP-208ENST00000539506 FAHD2AQ96GK7 314 aa10.94□□□□□ -0.66
SFSWAP-208ENST00000539506 MAGT1Q9H0U3 335 aa10.94□□□□□ -0.66
SFSWAP-208ENST00000539506 PRO3102Q9H379 93 aa10.94□□□□□ -0.66
SFSWAP-208ENST00000539506 KCNJ16Q9NPI9 418 aa10.94□□□□□ -0.66
SFSWAP-208ENST00000539506 TIMM10BQ9Y5J6 103 aa10.94□□□□□ -0.66
SFSWAP-208ENST00000539506 ZNF407Q9C0G0 2248 aa10.94□□□□□ -0.66
SFSWAP-208ENST00000539506 ZNF850A8MQ14 1090 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 MSTNO14793 375 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 MBPP02686 304 aaPredicted RBP10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 SMIM6P0DI80 62 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 AGAP20933 346 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 FPR2P25090 351 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 CTSSP25774 331 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 TMEM123Q8N131 208 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 FAM89BQ8N5H3 189 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 MAFAQ8NHW3 353 aaPredicted RBP10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 TMEM54Q969K7 222 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 NTNG2Q96CW9 530 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 OCSTAMPQ9BR26 566 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 OR51M1Q9H341 326 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 PLEKHJ1Q9NW61 149 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 CXorf65A6NEN9 183 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 GSTP1P09211 210 aaKnown RBP10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 OR5AC1P0C628 307 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 HOXB1P14653 301 aaPredicted RBP10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 LIFP15018 202 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 SNCAP37840 140 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 ZNF674Q2M3X9 581 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms