RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 DOCK8Q8NF50 2099 aa16.26■□□□□ 0.19
SFSWAP-207ENST00000538548 FAM230AA0A1W2PPH8 454 aa16.26■□□□□ 0.19
SFSWAP-207ENST00000538548 B4DEV8 164 aa16.26■□□□□ 0.19
SFSWAP-207ENST00000538548 TNFP01375 233 aa16.26■□□□□ 0.19
SFSWAP-207ENST00000538548 ZNF728P0DKX0 622 aa16.26■□□□□ 0.19
SFSWAP-207ENST00000538548 YPEL5P62699 121 aa16.26■□□□□ 0.19
SFSWAP-207ENST00000538548 CRIP3Q6Q6R5 217 aa16.26■□□□□ 0.19
SFSWAP-207ENST00000538548 SLC16A14Q7RTX9 510 aa16.26■□□□□ 0.19
SFSWAP-207ENST00000538548 C6orf201Q7Z4U5 140 aa16.26■□□□□ 0.19
SFSWAP-207ENST00000538548 DPPA2Q7Z7J5 298 aa16.26■□□□□ 0.19
SFSWAP-207ENST00000538548 YAF2Q8IY57 180 aa16.26■□□□□ 0.19
SFSWAP-207ENST00000538548 C1orf87Q8N0U7 546 aa16.26■□□□□ 0.19
SFSWAP-207ENST00000538548 FBXL14Q8N1E6 418 aa16.26■□□□□ 0.19
SFSWAP-207ENST00000538548 SLC38A9Q8NBW4 561 aa16.26■□□□□ 0.19
SFSWAP-207ENST00000538548 TMEM234Q8WY98 164 aa16.26■□□□□ 0.19
SFSWAP-207ENST00000538548 TOMM40LQ969M1 308 aa16.26■□□□□ 0.19
SFSWAP-207ENST00000538548 HIST1H2BLQ99880 126 aa16.26■□□□□ 0.19
SFSWAP-207ENST00000538548 ABHD14AQ9BUJ0 271 aa16.26■□□□□ 0.19
SFSWAP-207ENST00000538548 SLC25A31Q9H0C2 315 aa16.26■□□□□ 0.19
SFSWAP-207ENST00000538548 ZNF700Q9H0M5 742 aa16.26■□□□□ 0.19
SFSWAP-207ENST00000538548 LIME1Q9H400 295 aa16.26■□□□□ 0.19
SFSWAP-207ENST00000538548 SMOC1Q9H4F8 434 aa16.26■□□□□ 0.19
SFSWAP-207ENST00000538548 MMACHCQ9Y4U1 282 aa16.26■□□□□ 0.19
SFSWAP-207ENST00000538548 ATG2AQ2TAZ0 1938 aa16.26■□□□□ 0.19
SFSWAP-207ENST00000538548 CELA2BP08218 269 aaPredicted RBP16.25■□□□□ 0.19
SFSWAP-207ENST00000538548 ANOS1P23352 680 aa16.25■□□□□ 0.19
SFSWAP-207ENST00000538548 SP5Q6BEB4 398 aaPredicted RBP16.25■□□□□ 0.19
SFSWAP-207ENST00000538548 OGFOD3Q6PK18 319 aa16.25■□□□□ 0.19
SFSWAP-207ENST00000538548 REEP6Q96HR9 211 aa16.25■□□□□ 0.19
SFSWAP-207ENST00000538548 STMND1H3BQB6 276 aa16.25■□□□□ 0.19
SFSWAP-207ENST00000538548 TMEM225BP0DP42 221 aa16.25■□□□□ 0.19
SFSWAP-207ENST00000538548 CHAF1BQ13112 559 aa16.25■□□□□ 0.19
SFSWAP-207ENST00000538548 FZD2Q14332 565 aa16.25■□□□□ 0.19
SFSWAP-207ENST00000538548 Q6ZSR6 202 aa16.25■□□□□ 0.19
SFSWAP-207ENST00000538548 RCC1LQ96I51 464 aaKnown RBP16.25■□□□□ 0.19
SFSWAP-207ENST00000538548 GABRG3Q99928 467 aa16.25■□□□□ 0.19
SFSWAP-207ENST00000538548 PLEKHJ1Q9NW61 149 aa16.25■□□□□ 0.19
SFSWAP-207ENST00000538548 C9J4A7 227 aa16.24■□□□□ 0.19
SFSWAP-207ENST00000538548 COL9A1P20849 921 aa16.24■□□□□ 0.19
SFSWAP-207ENST00000538548 OR1D4P47884 311 aa16.24■□□□□ 0.19
SFSWAP-207ENST00000538548 ASCL1P50553 236 aa16.24■□□□□ 0.19
SFSWAP-207ENST00000538548 GABREP78334 506 aa16.24■□□□□ 0.19
SFSWAP-207ENST00000538548 DMRTC1Q5HYR2 192 aa16.24■□□□□ 0.19
SFSWAP-207ENST00000538548 THEM4Q5T1C6 240 aa16.24■□□□□ 0.19
SFSWAP-207ENST00000538548 LGI3Q8N145 548 aa16.24■□□□□ 0.19
SFSWAP-207ENST00000538548 OR2C3Q8N628 320 aa16.24■□□□□ 0.19
SFSWAP-207ENST00000538548 FGF14Q92915 247 aa16.24■□□□□ 0.19
SFSWAP-207ENST00000538548 MVB12AQ96EY5 273 aa16.24■□□□□ 0.19
SFSWAP-207ENST00000538548 A0A1W2PQF6 199 aa16.24■□□□□ 0.19
SFSWAP-207ENST00000538548 TNFRSF4P43489 277 aa16.24■□□□□ 0.19
SFSWAP-207ENST00000538548 CSNK1A1P48729 337 aa16.24■□□□□ 0.19
SFSWAP-207ENST00000538548 ZNF133P52736 654 aaPredicted RBP16.24■□□□□ 0.19
SFSWAP-207ENST00000538548 HLA-DRB3P79483 266 aa16.24■□□□□ 0.19
SFSWAP-207ENST00000538548 RAB24Q969Q5 203 aa16.24■□□□□ 0.19
SFSWAP-207ENST00000538548 MSI2Q96DH6 328 aaKnown RBP16.24■□□□□ 0.19
SFSWAP-207ENST00000538548 HDHD3Q9BSH5 251 aaPredicted RBP16.24■□□□□ 0.19
SFSWAP-207ENST00000538548 MRPL13Q9BYD1 178 aaKnown RBP16.24■□□□□ 0.19
SFSWAP-207ENST00000538548 FBRSQ9HAH7 460 aa16.24■□□□□ 0.19
SFSWAP-207ENST00000538548 NECAP2Q9NVZ3 263 aa16.24■□□□□ 0.19
SFSWAP-207ENST00000538548 DCAF16Q9NXF7 216 aa16.24■□□□□ 0.19
SFSWAP-207ENST00000538548 RP1P56715 2156 aa16.24■□□□□ 0.19
SFSWAP-207ENST00000538548 A8MWP6 167 aa16.23■□□□□ 0.19
SFSWAP-207ENST00000538548 HSPA12AO43301 675 aa16.23■□□□□ 0.19
SFSWAP-207ENST00000538548 PITX3O75364 302 aa16.23■□□□□ 0.19
SFSWAP-207ENST00000538548 FGF7P21781 194 aa16.23■□□□□ 0.19
SFSWAP-207ENST00000538548 PPM1FP49593 454 aaPredicted RBP16.23■□□□□ 0.19
SFSWAP-207ENST00000538548 ZNF385CQ66K41 422 aaPredicted RBP16.23■□□□□ 0.19
SFSWAP-207ENST00000538548 FAM57BQ71RH2 274 aa16.23■□□□□ 0.19
SFSWAP-207ENST00000538548 PLPP5Q8NEB5 264 aa16.23■□□□□ 0.19
SFSWAP-207ENST00000538548 OR4D5Q8NGN0 318 aa16.23■□□□□ 0.19
SFSWAP-207ENST00000538548 NPRL2Q8WTW4 380 aa16.23■□□□□ 0.19
SFSWAP-207ENST00000538548 NOL4LQ96MY1 436 aaPredicted RBP16.23■□□□□ 0.19
SFSWAP-207ENST00000538548 VN1R1Q9GZP7 353 aa16.23■□□□□ 0.19
SFSWAP-207ENST00000538548 WWTR1Q9GZV5 400 aa16.23■□□□□ 0.19
SFSWAP-207ENST00000538548 PITPNC1Q9UKF7 332 aa16.23■□□□□ 0.19
SFSWAP-207ENST00000538548 CYP8B1Q9UNU6 501 aa16.23■□□□□ 0.19
SFSWAP-207ENST00000538548 RFNGQ9Y644 331 aa16.23■□□□□ 0.19
SFSWAP-207ENST00000538548 CCDC187A0A096LP49 1063 aa16.23■□□□□ 0.19
SFSWAP-207ENST00000538548 IGKV3D-11A0A0A0MRZ8 115 aa16.23■□□□□ 0.19
SFSWAP-207ENST00000538548 JOSD1Q15040 202 aaPredicted RBP16.23■□□□□ 0.19
SFSWAP-207ENST00000538548 TSPO2Q5TGU0 170 aa16.23■□□□□ 0.19
SFSWAP-207ENST00000538548 TGIF2LXQ8IUE1 241 aa16.23■□□□□ 0.19
SFSWAP-207ENST00000538548 RBMXL1Q96E39 390 aaKnown RBP16.23■□□□□ 0.19
SFSWAP-207ENST00000538548 TMEM242Q9NWH2 141 aa16.23■□□□□ 0.19
SFSWAP-207ENST00000538548 ADAMTS9Q9P2N4 1935 aa16.23■□□□□ 0.19
SFSWAP-207ENST00000538548 DVL1O14640 695 aa16.22■□□□□ 0.19
SFSWAP-207ENST00000538548 TCAPO15273 167 aa16.22■□□□□ 0.19
SFSWAP-207ENST00000538548 QDPRP09417 244 aa16.22■□□□□ 0.19
SFSWAP-207ENST00000538548 HOXB2P14652 356 aa16.22■□□□□ 0.19
SFSWAP-207ENST00000538548 RND2P52198 227 aa16.22■□□□□ 0.19
SFSWAP-207ENST00000538548 CLDND2Q8NHS1 167 aa16.22■□□□□ 0.19
SFSWAP-207ENST00000538548 ELL3Q9HB65 397 aaPredicted RBP16.22■□□□□ 0.19
SFSWAP-207ENST00000538548 CRLF2Q9HC73 371 aa16.22■□□□□ 0.19
SFSWAP-207ENST00000538548 SLC2A9Q9NRM0 540 aa16.22■□□□□ 0.19
SFSWAP-207ENST00000538548 SERINC1Q9NRX5 453 aa16.22■□□□□ 0.19
SFSWAP-207ENST00000538548 A0A087WZY1 265 aa16.22■□□□□ 0.19
SFSWAP-207ENST00000538548 ZNF850A8MQ14 1090 aa16.22■□□□□ 0.19
SFSWAP-207ENST00000538548 PHOX2AO14813 284 aa16.22■□□□□ 0.19
SFSWAP-207ENST00000538548 GABRR1P24046 479 aa16.22■□□□□ 0.19
SFSWAP-207ENST00000538548 TCEAL6Q6IPX3 200 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms