RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 KMT2EQ8IZD2 1858 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 TRAV38-1A0A0B4J264 116 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 M0QYG6 137 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 CTAG2O75638 210 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 PSKH1P11801 424 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 AKR1C4P17516 323 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 DDOSTP39656 456 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 BAMBIQ13145 260 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 LRRC37A5PQ49AS3 106 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 ZNF367Q7RTV3 350 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 SMIM19Q96E16 107 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 OR5B12Q96R08 314 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 TXNL4BQ9NX01 149 aaKnown RBP6.16□□□□□ -1.42
MSH6-209ENST00000538136 ABRACLQ9P1F3 81 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 SLC25A10Q9UBX3 287 aaPredicted RBP6.16□□□□□ -1.42
MSH6-209ENST00000538136 ADAM30Q9UKF2 790 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 MRPS18CQ9Y3D5 142 aaKnown RBP6.16□□□□□ -1.42
MSH6-209ENST00000538136 WIPI2Q9Y4P8 454 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 IGHV4-30-2A0A087WSY4 118 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 A0A1B0GW55 424 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 A0A1W2PRX2 142 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 ZNF254O75437 659 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 IGHV1-46P01743 117 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 DUX4L2P0CJ85 424 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 DUX4L3P0CJ86 424 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 DUX4L4P0CJ87 422 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 DUX4L5P0CJ88 424 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 DUX4L6P0CJ89 424 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 DUX4L7P0CJ90 424 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 KIR3DL2P43630 455 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 UBE2V2Q15819 145 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 KRBOX4Q5JUW0 171 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 OLFML2AQ68BL7 652 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 ZNF324BQ6AW86 544 aaPredicted RBP6.16□□□□□ -1.42
MSH6-209ENST00000538136 DUX4L9Q6RFH8 374 aaPredicted RBP6.16□□□□□ -1.42
MSH6-209ENST00000538136 C1QL2Q7Z5L3 287 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 ZNF584Q8IVC4 421 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 TMEM54Q969K7 222 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 CNTD2Q9H8S5 307 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 DUX4Q9UBX2 424 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 STUB1Q9UNE7 303 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 TRAV40A0A0B4J280 105 aa6.15□□□□□ -1.42
MSH6-209ENST00000538136 SH2D7A6NKC9 451 aaPredicted RBP6.15□□□□□ -1.42
MSH6-209ENST00000538136 SULT1B1O43704 296 aa6.15□□□□□ -1.42
MSH6-209ENST00000538136 GPX5O75715 221 aa6.15□□□□□ -1.42
MSH6-209ENST00000538136 CNIH1O95406 144 aa6.15□□□□□ -1.42
MSH6-209ENST00000538136 APOA1P02647 267 aa6.15□□□□□ -1.42
MSH6-209ENST00000538136 SFTPBP07988 381 aa6.15□□□□□ -1.42
MSH6-209ENST00000538136 RAC2P15153 192 aa6.15□□□□□ -1.42
MSH6-209ENST00000538136 PPP3CBP16298 524 aa6.15□□□□□ -1.42
MSH6-209ENST00000538136 ANOS1P23352 680 aa6.15□□□□□ -1.42
MSH6-209ENST00000538136 AKR1C2P52895 323 aa6.15□□□□□ -1.42
MSH6-209ENST00000538136 GUCA2AQ02747 115 aa6.15□□□□□ -1.42
MSH6-209ENST00000538136 FXNQ16595 210 aa6.15□□□□□ -1.42
MSH6-209ENST00000538136 ZNF404Q494X3 552 aa6.15□□□□□ -1.42
MSH6-209ENST00000538136 NCMAPQ5T1S8 102 aa6.15□□□□□ -1.42
MSH6-209ENST00000538136 CLEC9AQ6UXN8 241 aa6.15□□□□□ -1.42
MSH6-209ENST00000538136 ELMOD2Q8IZ81 293 aa6.15□□□□□ -1.42
MSH6-209ENST00000538136 PRSS35Q8N3Z0 413 aa6.15□□□□□ -1.42
MSH6-209ENST00000538136 NANOGP1Q8N7R0 232 aa6.15□□□□□ -1.42
MSH6-209ENST00000538136 TMEM104Q8NE00 496 aa6.15□□□□□ -1.42
MSH6-209ENST00000538136 ENKURQ8TC29 256 aa6.15□□□□□ -1.42
MSH6-209ENST00000538136 CHIAQ9BZP6 476 aa6.15□□□□□ -1.42
MSH6-209ENST00000538136 SHARPINQ9H0F6 387 aa6.15□□□□□ -1.42
MSH6-209ENST00000538136 IGKV3D-15A0A087WSY6 115 aa6.15□□□□□ -1.42
MSH6-209ENST00000538136 C13orf42A0A1B0GVH6 325 aa6.15□□□□□ -1.42
MSH6-209ENST00000538136 ACHEP22303 614 aa6.15□□□□□ -1.42
MSH6-209ENST00000538136 OPRL1P41146 370 aa6.15□□□□□ -1.42
MSH6-209ENST00000538136 PTH2RP49190 550 aa6.15□□□□□ -1.42
MSH6-209ENST00000538136 P2RY4P51582 365 aa6.15□□□□□ -1.42
MSH6-209ENST00000538136 COL10A1Q03692 680 aa6.15□□□□□ -1.42
MSH6-209ENST00000538136 EGR3Q06889 387 aa6.15□□□□□ -1.42
MSH6-209ENST00000538136 C2orf76Q3KRA6 126 aa6.15□□□□□ -1.42
MSH6-209ENST00000538136 LIN54Q6MZP7 749 aa6.15□□□□□ -1.42
MSH6-209ENST00000538136 LRRC75AQ8NAA5 344 aa6.15□□□□□ -1.42
MSH6-209ENST00000538136 OR4S1Q8NGB4 309 aa6.15□□□□□ -1.42
MSH6-209ENST00000538136 MEGF10Q96KG7 1140 aa6.15□□□□□ -1.42
MSH6-209ENST00000538136 NICN1Q9BSH3 213 aa6.15□□□□□ -1.42
MSH6-209ENST00000538136 SLC5A7Q9GZV3 580 aa6.15□□□□□ -1.42
MSH6-209ENST00000538136 PCDHB16Q9NRJ7 776 aa6.15□□□□□ -1.42
MSH6-209ENST00000538136 RHBDL2Q9NX52 303 aa6.15□□□□□ -1.42
MSH6-209ENST00000538136 OR4C45A6NMZ5 311 aa6.15□□□□□ -1.43
MSH6-209ENST00000538136 HSD17B6O14756 317 aa6.15□□□□□ -1.43
MSH6-209ENST00000538136 RAF1P04049 648 aa6.15□□□□□ -1.43
MSH6-209ENST00000538136 PRDX2P32119 198 aa6.15□□□□□ -1.43
MSH6-209ENST00000538136 KLRD1Q13241 179 aa6.15□□□□□ -1.43
MSH6-209ENST00000538136 OR52W1Q6IF63 320 aa6.15□□□□□ -1.43
MSH6-209ENST00000538136 IQCF2Q8IXL9 164 aa6.15□□□□□ -1.43
MSH6-209ENST00000538136 AP3S1Q92572 193 aa6.15□□□□□ -1.43
MSH6-209ENST00000538136 DUS3LQ96G46 650 aaKnown RBP6.15□□□□□ -1.43
MSH6-209ENST00000538136 DIRC2Q96SL1 478 aa6.15□□□□□ -1.43
MSH6-209ENST00000538136 FAM240BA0A1B0GVZ2 78 aa6.15□□□□□ -1.43
MSH6-209ENST00000538136 A0A1W2PPR1 153 aa6.15□□□□□ -1.43
MSH6-209ENST00000538136 MEGF11A6BM72 1044 aa6.15□□□□□ -1.43
MSH6-209ENST00000538136 DLGAP1O14490 977 aa6.15□□□□□ -1.43
MSH6-209ENST00000538136 PMP2P02689 132 aa6.15□□□□□ -1.43
MSH6-209ENST00000538136 RCC1P18754 421 aaPredicted RBP6.15□□□□□ -1.43
MSH6-209ENST00000538136 CRYGSP22914 178 aa6.15□□□□□ -1.43
MSH6-209ENST00000538136 PTGFRP43088 359 aa6.15□□□□□ -1.43
MSH6-209ENST00000538136 GLIPR1P48060 266 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms