RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 CNEP1R1Q8N9A8 125 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 DHRS7CA6NNS2 312 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 HBQ1P09105 142 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 PRF1P14222 555 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 CCR2P41597 374 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 KHDC3LQ587J8 217 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 MORN1Q5T089 497 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 LRP10Q7Z4F1 713 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 PCGF1Q9BSM1 259 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 MS4A8Q9BY19 250 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 COA3Q9Y2R0 106 aaPredicted RBP5.09□□□□□ -1.59
CSMD1-215ENST00000537824 UFC1Q9Y3C8 167 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 R4GMQ9 66 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 LRRK2Q5S007 2527 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 WNT11O96014 354 aa5.09□□□□□ -1.6
CSMD1-215ENST00000537824 HOXB2P14652 356 aa5.09□□□□□ -1.6
CSMD1-215ENST00000537824 ZNF343Q6P1L6 599 aa5.09□□□□□ -1.6
CSMD1-215ENST00000537824 MTURNQ8N3F0 131 aa5.09□□□□□ -1.6
CSMD1-215ENST00000537824 SLC45A2Q9UMX9 530 aa5.09□□□□□ -1.6
CSMD1-215ENST00000537824 H7C2G1 150 aa5.09□□□□□ -1.6
CSMD1-215ENST00000537824 PRSS1P07477 247 aa5.09□□□□□ -1.6
CSMD1-215ENST00000537824 GUSBP08236 651 aa5.09□□□□□ -1.6
CSMD1-215ENST00000537824 ATRAIDQ6UW56 229 aa5.09□□□□□ -1.6
CSMD1-215ENST00000537824 FBXL14Q8N1E6 418 aa5.09□□□□□ -1.6
CSMD1-215ENST00000537824 BHLHE23Q8NDY6 225 aa5.09□□□□□ -1.6
CSMD1-215ENST00000537824 SLAMF6Q96DU3 332 aa5.09□□□□□ -1.6
CSMD1-215ENST00000537824 BARHL1Q9BZE3 327 aa5.09□□□□□ -1.6
CSMD1-215ENST00000537824 SUOXP51687 545 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 ZNF121P58317 390 aaPredicted RBP5.08□□□□□ -1.6
CSMD1-215ENST00000537824 PFN3P60673 137 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 ARG2P78540 354 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 DNLZQ5SXM8 178 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 MARVELD3Q96A59 401 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 VN1R1Q9GZP7 353 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 SPHK2Q9NRA0 654 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 SLC6A13Q9NSD5 602 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 VAX2Q9UIW0 290 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 SRPK3Q9UPE1 567 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 COL14A1Q05707 1796 aaKnown RBP5.08□□□□□ -1.6
CSMD1-215ENST00000537824 GFYI3L273 518 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 ABLIM3O94929 683 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 PRDX1Q06830 199 aaKnown RBP5.08□□□□□ -1.6
CSMD1-215ENST00000537824 PLPPR5Q32ZL2 321 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 TMEM116Q8NCL8 245 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 PAAF1Q9BRP4 392 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 A0A0U1RQF3 1178 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 OR2W5A6NFC9 320 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 CRXO43186 299 aaPredicted RBP5.08□□□□□ -1.6
CSMD1-215ENST00000537824 CYBAP13498 195 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 ICAM2P13598 275 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 KIR2DS3Q14952 304 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 TMEM25Q86YD3 366 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 ANAPC16Q96DE5 110 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 PIPOXQ9P0Z9 390 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 RCC2Q9P258 522 aaKnown RBP5.08□□□□□ -1.6
CSMD1-215ENST00000537824 CLDN16Q9Y5I7 305 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 ZNF253O75346 499 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 SRSF9Q13242 221 aaKnown RBP eCLIP5.08□□□□□ -1.6
CSMD1-215ENST00000537824 RTL8BQ17RB0 113 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 WDFY1Q8IWB7 410 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 ARRDC1Q8N5I2 433 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 OR4D9Q8NGE8 314 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 RAB40CQ96S21 281 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 OBP2AQ9NY56 170 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 DHCR7Q9UBM7 475 aaKnown RBP5.08□□□□□ -1.6
CSMD1-215ENST00000537824 VSIG4Q9Y279 399 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 MTORP42345 2549 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 CSNK1G2P78368 415 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 MYBPHQ13203 477 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 IL10RAQ13651 578 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 OR8B8Q15620 311 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 DMRTC1Q5HYR2 192 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 EMC4Q5J8M3 183 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 FCRL6Q6DN72 434 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 TRAT1Q6PIZ9 186 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 DRAM2Q6UX65 266 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 NIT1Q86X76 327 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 OR2C3Q8N628 320 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 RDH5Q92781 318 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 RNF2Q99496 336 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 ZMIZ1Q9ULJ6 1067 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 P2RY2P41231 377 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 NPBWR2P48146 333 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 HFEQ30201 348 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 SLC39A5Q6ZMH5 540 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 LIAT1Q6ZQX7 453 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 MSRB3Q8IXL7 192 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 PBX4Q9BYU1 374 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 FTSJ1Q9UET6 329 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 PLXNA4Q9HCM2 1894 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 A0A1W2PR80 420 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 CEBPBP17676 345 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 FAHD2BQ6P2I3 314 aaPredicted RBP5.08□□□□□ -1.6
CSMD1-215ENST00000537824 OR11L1Q8NGX0 322 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 FAHD2AQ96GK7 314 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 GMPPAQ96IJ6 420 aaPredicted RBP5.08□□□□□ -1.6
CSMD1-215ENST00000537824 MOGAT1Q96PD6 335 aa5.08□□□□□ -1.6
CSMD1-215ENST00000537824 HOXD4P09016 255 aaPredicted RBP5.08□□□□□ -1.6
CSMD1-215ENST00000537824 SNRPCP09234 159 aaKnown RBP5.08□□□□□ -1.6
CSMD1-215ENST00000537824 SLC25A1P53007 311 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms