RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 TMEM54Q969K7 222 aa10.59□□□□□ -0.71
CPSF7-218ENST00000537641 PIGTQ969N2 578 aa10.59□□□□□ -0.71
CPSF7-218ENST00000537641 SYT3Q9BQG1 590 aa10.59□□□□□ -0.71
CPSF7-218ENST00000537641 DUSP23Q9BVJ7 150 aa10.59□□□□□ -0.71
CPSF7-218ENST00000537641 METTL7AQ9H8H3 244 aa10.59□□□□□ -0.71
CPSF7-218ENST00000537641 AK3Q9UIJ7 227 aa10.59□□□□□ -0.71
CPSF7-218ENST00000537641 ZDHHC8Q9ULC8 765 aa10.59□□□□□ -0.71
CPSF7-218ENST00000537641 PIGLQ9Y2B2 252 aa10.59□□□□□ -0.71
CPSF7-218ENST00000537641 RCL1Q9Y2P8 373 aaKnown RBP10.59□□□□□ -0.71
CPSF7-218ENST00000537641 TRAV20A0A0B4J274 112 aa10.58□□□□□ -0.72
CPSF7-218ENST00000537641 A0A1W2PPE2 198 aa10.58□□□□□ -0.72
CPSF7-218ENST00000537641 C5orf63A6NC05 138 aa10.58□□□□□ -0.72
CPSF7-218ENST00000537641 ZNF814B7Z6K7 855 aa10.58□□□□□ -0.72
CPSF7-218ENST00000537641 WRBO00258 174 aa10.58□□□□□ -0.72
CPSF7-218ENST00000537641 TXNL1O43396 289 aa10.58□□□□□ -0.72
CPSF7-218ENST00000537641 PPIHO43447 177 aaKnown RBP10.58□□□□□ -0.72
CPSF7-218ENST00000537641 NQO2P16083 231 aa10.58□□□□□ -0.72
CPSF7-218ENST00000537641 EPHA8P29322 1005 aaPredicted RBP10.58□□□□□ -0.72
CPSF7-218ENST00000537641 ZNF266Q14584 549 aa10.58□□□□□ -0.72
CPSF7-218ENST00000537641 ZNF574Q6ZN55 896 aaPredicted RBP10.58□□□□□ -0.72
CPSF7-218ENST00000537641 SHISA6Q6ZSJ9 500 aa10.58□□□□□ -0.72
CPSF7-218ENST00000537641 FAM24BQ8N5W8 94 aa10.58□□□□□ -0.72
CPSF7-218ENST00000537641 SUMF2Q8NBJ7 301 aa10.58□□□□□ -0.72
CPSF7-218ENST00000537641 OR4D5Q8NGN0 318 aa10.58□□□□□ -0.72
CPSF7-218ENST00000537641 CD300LFQ8TDQ1 290 aa10.58□□□□□ -0.72
CPSF7-218ENST00000537641 THAP3Q8WTV1 239 aaPredicted RBP10.58□□□□□ -0.72
CPSF7-218ENST00000537641 TOMM40LQ969M1 308 aa10.58□□□□□ -0.72
CPSF7-218ENST00000537641 HDHD3Q9BSH5 251 aaPredicted RBP10.58□□□□□ -0.72
CPSF7-218ENST00000537641 C20orf24Q9BUV8 137 aa10.58□□□□□ -0.72
CPSF7-218ENST00000537641 PARP12Q9H0J9 701 aaKnown RBP10.58□□□□□ -0.72
CPSF7-218ENST00000537641 TINAGQ9UJW2 476 aa10.58□□□□□ -0.72
CPSF7-218ENST00000537641 TCFL5Q9UL49 500 aa10.58□□□□□ -0.72
CPSF7-218ENST00000537641 TMED3Q9Y3Q3 217 aa10.58□□□□□ -0.72
CPSF7-218ENST00000537641 PI4KAP42356 2102 aa10.58□□□□□ -0.72
CPSF7-218ENST00000537641 ZNF850A8MQ14 1090 aa10.58□□□□□ -0.72
CPSF7-218ENST00000537641 TNRC18O15417 2968 aaPredicted RBP10.58□□□□□ -0.72
CPSF7-218ENST00000537641 DAOP14920 347 aa10.58□□□□□ -0.72
CPSF7-218ENST00000537641 CLDN17P56750 224 aa10.58□□□□□ -0.72
CPSF7-218ENST00000537641 RAB2AP61019 212 aa10.58□□□□□ -0.72
CPSF7-218ENST00000537641 RPS23P62266 143 aaKnown RBP10.58□□□□□ -0.72
CPSF7-218ENST00000537641 SRPXP78539 464 aa10.58□□□□□ -0.72
CPSF7-218ENST00000537641 CNN3Q15417 329 aaKnown RBP10.58□□□□□ -0.72
CPSF7-218ENST00000537641 TGIF1Q15583 401 aa10.58□□□□□ -0.72
CPSF7-218ENST00000537641 OR8B8Q15620 311 aa10.58□□□□□ -0.72
CPSF7-218ENST00000537641 NKAIN1Q4KMZ8 207 aa10.58□□□□□ -0.72
CPSF7-218ENST00000537641 HIKESHIQ53FT3 197 aa10.58□□□□□ -0.72
CPSF7-218ENST00000537641 LYSMD4Q5XG99 296 aa10.58□□□□□ -0.72
CPSF7-218ENST00000537641 ADAM5Q6NVV9 412 aa10.58□□□□□ -0.72
CPSF7-218ENST00000537641 HEPN1Q6WQI6 88 aa10.58□□□□□ -0.72
CPSF7-218ENST00000537641 LYZL2Q7Z4W2 148 aa10.58□□□□□ -0.72
CPSF7-218ENST00000537641 FADS6Q8N9I5 356 aa10.58□□□□□ -0.72
CPSF7-218ENST00000537641 SPTSSAQ969W0 71 aa10.58□□□□□ -0.72
CPSF7-218ENST00000537641 MSI2Q96DH6 328 aaKnown RBP10.58□□□□□ -0.72
CPSF7-218ENST00000537641 ABHD14BQ96IU4 210 aa10.58□□□□□ -0.72
CPSF7-218ENST00000537641 IER2Q9BTL4 223 aa10.58□□□□□ -0.72
CPSF7-218ENST00000537641 LIME1Q9H400 295 aa10.58□□□□□ -0.72
CPSF7-218ENST00000537641 C11orf1Q9H5F2 150 aa10.58□□□□□ -0.72
CPSF7-218ENST00000537641 FBXO7Q9Y3I1 522 aa10.58□□□□□ -0.72
CPSF7-218ENST00000537641 SIT1Q9Y3P8 196 aa10.58□□□□□ -0.72
CPSF7-218ENST00000537641 DMRT1Q9Y5R6 373 aa10.58□□□□□ -0.72
CPSF7-218ENST00000537641 A0A087WWC5 75 aa10.57□□□□□ -0.72
CPSF7-218ENST00000537641 OR5H15A6NDH6 313 aa10.57□□□□□ -0.72
CPSF7-218ENST00000537641 F5H5K5 113 aa10.57□□□□□ -0.72
CPSF7-218ENST00000537641 M0R135 149 aa10.57□□□□□ -0.72
CPSF7-218ENST00000537641 YKT6O15498 198 aa10.57□□□□□ -0.72
CPSF7-218ENST00000537641 XRCC2O43543 280 aa10.57□□□□□ -0.72
CPSF7-218ENST00000537641 RAMP1O60894 148 aa10.57□□□□□ -0.72
CPSF7-218ENST00000537641 PITX3O75364 302 aa10.57□□□□□ -0.72
CPSF7-218ENST00000537641 ZFAND5O76080 213 aa10.57□□□□□ -0.72
CPSF7-218ENST00000537641 OR2C1O95371 312 aa10.57□□□□□ -0.72
CPSF7-218ENST00000537641 DIRAS3O95661 229 aa10.57□□□□□ -0.72
CPSF7-218ENST00000537641 CDS2O95674 445 aa10.57□□□□□ -0.72
CPSF7-218ENST00000537641 ARG1P05089 322 aa10.57□□□□□ -0.72
CPSF7-218ENST00000537641 HOXA5P20719 270 aa10.57□□□□□ -0.72
CPSF7-218ENST00000537641 SFTPDP35247 375 aa10.57□□□□□ -0.72
CPSF7-218ENST00000537641 PPP1CCP36873 323 aaKnown RBP10.57□□□□□ -0.72
CPSF7-218ENST00000537641 HTR5AP47898 357 aa10.57□□□□□ -0.72
CPSF7-218ENST00000537641 EWSR1Q01844 656 aaKnown RBP eCLIP10.57□□□□□ -0.72
CPSF7-218ENST00000537641 GNMTQ14749 295 aa10.57□□□□□ -0.72
CPSF7-218ENST00000537641 RSU1Q15404 277 aa10.57□□□□□ -0.72
CPSF7-218ENST00000537641 IGSF11Q5DX21 431 aa10.57□□□□□ -0.72
CPSF7-218ENST00000537641 SOHLH1Q5JUK2 328 aa10.57□□□□□ -0.72
CPSF7-218ENST00000537641 ACER2Q5QJU3 275 aa10.57□□□□□ -0.72
CPSF7-218ENST00000537641 ASCL4Q6XD76 172 aa10.57□□□□□ -0.72
CPSF7-218ENST00000537641 TMEM182Q6ZP80 229 aaPredicted RBP10.57□□□□□ -0.72
CPSF7-218ENST00000537641 WDSUB1Q8N9V3 476 aa10.57□□□□□ -0.72
CPSF7-218ENST00000537641 FAM213BQ8TBF2 198 aa10.57□□□□□ -0.72
CPSF7-218ENST00000537641 NABP1Q96AH0 204 aa10.57□□□□□ -0.72
CPSF7-218ENST00000537641 MOB3AQ96BX8 217 aa10.57□□□□□ -0.72
CPSF7-218ENST00000537641 FBXO17Q96EF6 278 aa10.57□□□□□ -0.72
CPSF7-218ENST00000537641 ZNF799Q96GE5 643 aa10.57□□□□□ -0.72
CPSF7-218ENST00000537641 MARS2Q96GW9 593 aaKnown RBP10.57□□□□□ -0.72
CPSF7-218ENST00000537641 BOD1Q96IK1 185 aa10.57□□□□□ -0.72
CPSF7-218ENST00000537641 RSRP1Q9BUV0 290 aa10.57□□□□□ -0.72
CPSF7-218ENST00000537641 SH3BGRL3Q9H299 93 aa10.57□□□□□ -0.72
CPSF7-218ENST00000537641 ZNF286AQ9HBT8 521 aa10.57□□□□□ -0.72
CPSF7-218ENST00000537641 SLC2A9Q9NRM0 540 aa10.57□□□□□ -0.72
CPSF7-218ENST00000537641 NOSIPQ9Y314 301 aaKnown RBP10.57□□□□□ -0.72
CPSF7-218ENST00000537641 SDK1Q7Z5N4 2213 aa10.57□□□□□ -0.72
CPSF7-218ENST00000537641 LAMA1P25391 3075 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms