RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 DHRSXQ8N5I4 330 aa14.1□□□□□ -0.15
SFSWAP-205ENST00000537164 PARP16Q8N5Y8 322 aa14.1□□□□□ -0.15
SFSWAP-205ENST00000537164 SETD9Q8NE22 299 aa14.1□□□□□ -0.15
SFSWAP-205ENST00000537164 OR13C3Q8NGS6 347 aa14.1□□□□□ -0.15
SFSWAP-205ENST00000537164 CNIH3Q8TBE1 160 aa14.1□□□□□ -0.15
SFSWAP-205ENST00000537164 TBC1D15Q8TC07 691 aa14.1□□□□□ -0.15
SFSWAP-205ENST00000537164 ZDHHC16Q969W1 377 aa14.1□□□□□ -0.15
SFSWAP-205ENST00000537164 SIRT7Q9NRC8 400 aa14.1□□□□□ -0.15
SFSWAP-205ENST00000537164 CAB39Q9Y376 341 aaPredicted RBP14.1□□□□□ -0.15
SFSWAP-205ENST00000537164 TRBV2A0A0J9YWF9 115 aa14.09□□□□□ -0.15
SFSWAP-205ENST00000537164 A0A1W2PQ09 198 aa14.09□□□□□ -0.15
SFSWAP-205ENST00000537164 IRGMA1A4Y4 181 aa14.09□□□□□ -0.15
SFSWAP-205ENST00000537164 H0YAE9 185 aa14.09□□□□□ -0.15
SFSWAP-205ENST00000537164 ZNF737O75373 536 aa14.09□□□□□ -0.15
SFSWAP-205ENST00000537164 CHRM2P08172 466 aa14.09□□□□□ -0.15
SFSWAP-205ENST00000537164 MELTFP08582 738 aa14.09□□□□□ -0.15
SFSWAP-205ENST00000537164 CEBPDP49716 269 aaPredicted RBP14.09□□□□□ -0.15
SFSWAP-205ENST00000537164 UBE2E1P51965 193 aa14.09□□□□□ -0.15
SFSWAP-205ENST00000537164 GBX2P52951 348 aaPredicted RBP14.09□□□□□ -0.15
SFSWAP-205ENST00000537164 MTCP1P56278 107 aa14.09□□□□□ -0.15
SFSWAP-205ENST00000537164 FOXL1Q12952 345 aa14.09□□□□□ -0.15
SFSWAP-205ENST00000537164 AWAT1Q58HT5 328 aa14.09□□□□□ -0.15
SFSWAP-205ENST00000537164 NCR3LG1Q68D85 454 aa14.09□□□□□ -0.15
SFSWAP-205ENST00000537164 CRIP3Q6Q6R5 217 aa14.09□□□□□ -0.15
SFSWAP-205ENST00000537164 C11orf42Q8N5U0 333 aa14.09□□□□□ -0.15
SFSWAP-205ENST00000537164 OR5D13Q8NGL4 314 aa14.09□□□□□ -0.15
SFSWAP-205ENST00000537164 OR5AK2Q8NH90 309 aa14.09□□□□□ -0.15
SFSWAP-205ENST00000537164 CYGBQ8WWM9 190 aa14.09□□□□□ -0.15
SFSWAP-205ENST00000537164 SLAMF9Q96A28 289 aa14.09□□□□□ -0.15
SFSWAP-205ENST00000537164 OPALINQ96PE5 141 aa14.09□□□□□ -0.15
SFSWAP-205ENST00000537164 C19orf12Q9NSK7 152 aa14.09□□□□□ -0.15
SFSWAP-205ENST00000537164 DIMT1Q9UNQ2 313 aaKnown RBP14.09□□□□□ -0.15
SFSWAP-205ENST00000537164 A0A0U1RQK1 487 aa14.08□□□□□ -0.16
SFSWAP-205ENST00000537164 ETV1P50549 477 aa14.08□□□□□ -0.16
SFSWAP-205ENST00000537164 CAPZA1P52907 286 aa14.08□□□□□ -0.16
SFSWAP-205ENST00000537164 RPL31P62899 125 aaKnown RBP14.08□□□□□ -0.16
SFSWAP-205ENST00000537164 COL10A1Q03692 680 aa14.08□□□□□ -0.16
SFSWAP-205ENST00000537164 ACSM1Q08AH1 577 aa14.08□□□□□ -0.16
SFSWAP-205ENST00000537164 PDZK1IP1Q13113 114 aa14.08□□□□□ -0.16
SFSWAP-205ENST00000537164 BLMHQ13867 455 aa14.08□□□□□ -0.16
SFSWAP-205ENST00000537164 ZNF146Q15072 292 aa14.08□□□□□ -0.16
SFSWAP-205ENST00000537164 TMEM200BQ69YZ2 307 aa14.08□□□□□ -0.16
SFSWAP-205ENST00000537164 RPL22L1Q6P5R6 122 aaKnown RBP14.08□□□□□ -0.16
SFSWAP-205ENST00000537164 SERPINA12Q8IW75 414 aa14.08□□□□□ -0.16
SFSWAP-205ENST00000537164 BATF2Q8N1L9 274 aa14.08□□□□□ -0.16
SFSWAP-205ENST00000537164 SSMEM1Q8WWF3 244 aa14.08□□□□□ -0.16
SFSWAP-205ENST00000537164 PDCD1LG2Q9BQ51 273 aa14.08□□□□□ -0.16
SFSWAP-205ENST00000537164 COMMD4Q9H0A8 199 aa14.08□□□□□ -0.16
SFSWAP-205ENST00000537164 ZCCHC4Q9H5U6 513 aa14.08□□□□□ -0.16
SFSWAP-205ENST00000537164 DCLRE1BQ9H816 532 aa14.08□□□□□ -0.16
SFSWAP-205ENST00000537164 RHOFQ9HBH0 211 aa14.08□□□□□ -0.16
SFSWAP-205ENST00000537164 OR14J1Q9UGF5 321 aa14.08□□□□□ -0.16
SFSWAP-205ENST00000537164 A0A1W2PPH5 198 aa14.07□□□□□ -0.16
SFSWAP-205ENST00000537164 CYB5AP00167 134 aa14.07□□□□□ -0.16
SFSWAP-205ENST00000537164 EEF1B2P24534 225 aaKnown RBP14.07□□□□□ -0.16
SFSWAP-205ENST00000537164 NPBWR2P48146 333 aa14.07□□□□□ -0.16
SFSWAP-205ENST00000537164 RPL15P61313 204 aaKnown RBP14.07□□□□□ -0.16
SFSWAP-205ENST00000537164 HCP5Q6MZN7 132 aa14.07□□□□□ -0.16
SFSWAP-205ENST00000537164 ZNF529Q6P280 563 aa14.07□□□□□ -0.16
SFSWAP-205ENST00000537164 PDZD9Q8IXQ8 264 aa14.07□□□□□ -0.16
SFSWAP-205ENST00000537164 SAXO1Q8IYX7 474 aa14.07□□□□□ -0.16
SFSWAP-205ENST00000537164 FAM185AQ8N0U4 392 aa14.07□□□□□ -0.16
SFSWAP-205ENST00000537164 OR5D14Q8NGL3 314 aa14.07□□□□□ -0.16
SFSWAP-205ENST00000537164 OR13C9Q8NGT0 318 aa14.07□□□□□ -0.16
SFSWAP-205ENST00000537164 FBLIM1Q8WUP2 373 aa14.07□□□□□ -0.16
SFSWAP-205ENST00000537164 ANKRD65E5RJM6 399 aa14.06□□□□□ -0.16
SFSWAP-205ENST00000537164 NPFFO15130 113 aa14.06□□□□□ -0.16
SFSWAP-205ENST00000537164 PIPP12273 146 aaPredicted RBP14.06□□□□□ -0.16
SFSWAP-205ENST00000537164 CAPGP40121 348 aa14.06□□□□□ -0.16
SFSWAP-205ENST00000537164 IER3P46695 156 aa14.06□□□□□ -0.16
SFSWAP-205ENST00000537164 GTF2A1P52655 376 aaPredicted RBP14.06□□□□□ -0.16
SFSWAP-205ENST00000537164 DLX1P56177 255 aa14.06□□□□□ -0.16
SFSWAP-205ENST00000537164 KLRD1Q13241 179 aa14.06□□□□□ -0.16
SFSWAP-205ENST00000537164 CDK5R1Q15078 307 aa14.06□□□□□ -0.16
SFSWAP-205ENST00000537164 SPIN3Q5JUX0 258 aa14.06□□□□□ -0.16
SFSWAP-205ENST00000537164 XAF1Q6GPH4 301 aa14.06□□□□□ -0.16
SFSWAP-205ENST00000537164 TMPRSS11AQ6ZMR5 421 aa14.06□□□□□ -0.16
SFSWAP-205ENST00000537164 C17orf107Q6ZR85 190 aa14.06□□□□□ -0.16
SFSWAP-205ENST00000537164 OR8H2Q8N162 312 aa14.06□□□□□ -0.16
SFSWAP-205ENST00000537164 FAM58AQ8N1B3 248 aa14.06□□□□□ -0.16
SFSWAP-205ENST00000537164 ZNF485Q8NCK3 441 aa14.06□□□□□ -0.16
SFSWAP-205ENST00000537164 RGP1Q92546 391 aaPredicted RBP14.06□□□□□ -0.16
SFSWAP-205ENST00000537164 EMG1Q92979 244 aaKnown RBP14.06□□□□□ -0.16
SFSWAP-205ENST00000537164 SNX22Q96L94 193 aa14.06□□□□□ -0.16
SFSWAP-205ENST00000537164 CHIAQ9BZP6 476 aa14.06□□□□□ -0.16
SFSWAP-205ENST00000537164 NEK6Q9HC98 313 aa14.06□□□□□ -0.16
SFSWAP-205ENST00000537164 RBFOX1Q9NWB1 397 aaKnown RBP14.06□□□□□ -0.16
SFSWAP-205ENST00000537164 EXOSC1Q9Y3B2 195 aaKnown RBP14.06□□□□□ -0.16
SFSWAP-205ENST00000537164 IGKV1-12A0A0C4DH73 117 aa14.05□□□□□ -0.16
SFSWAP-205ENST00000537164 OGG1O15527 345 aa14.05□□□□□ -0.16
SFSWAP-205ENST00000537164 SPRY1O43609 319 aaPredicted RBP14.05□□□□□ -0.16
SFSWAP-205ENST00000537164 SULT1B1O43704 296 aa14.05□□□□□ -0.16
SFSWAP-205ENST00000537164 KDM4BO94953 1096 aa14.05□□□□□ -0.16
SFSWAP-205ENST00000537164 IGKV1D-12P01611 117 aa14.05□□□□□ -0.16
SFSWAP-205ENST00000537164 FBP1P09467 338 aa14.05□□□□□ -0.16
SFSWAP-205ENST00000537164 GNAO1P09471 354 aa14.05□□□□□ -0.16
SFSWAP-205ENST00000537164 BCL3P20749 454 aa14.05□□□□□ -0.16
SFSWAP-205ENST00000537164 POU3F4P49335 361 aa14.05□□□□□ -0.16
SFSWAP-205ENST00000537164 DLX6P56179 175 aa14.05□□□□□ -0.16
SFSWAP-205ENST00000537164 MIDNQ504T8 468 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 159 ms