RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 RBP2P50120 134 aa6.82□□□□□ -1.32
CPSF7-216ENST00000536548 CCR5P51681 352 aa6.82□□□□□ -1.32
CPSF7-216ENST00000536548 SLC37A1P57057 533 aa6.82□□□□□ -1.32
CPSF7-216ENST00000536548 RAB4BP61018 213 aa6.82□□□□□ -1.32
CPSF7-216ENST00000536548 C14orf28Q4W4Y0 310 aa6.82□□□□□ -1.32
CPSF7-216ENST00000536548 LBHQ53QV2 105 aaPredicted RBP6.82□□□□□ -1.32
CPSF7-216ENST00000536548 PLAC9Q5JTB6 97 aa6.82□□□□□ -1.32
CPSF7-216ENST00000536548 SOHLH1Q5JUK2 328 aa6.82□□□□□ -1.32
CPSF7-216ENST00000536548 AADACL3Q5VUY0 350 aa6.82□□□□□ -1.32
CPSF7-216ENST00000536548 GGNBP1Q5YKI7 109 aa6.82□□□□□ -1.32
CPSF7-216ENST00000536548 OR2A2Q6IF42 318 aa6.82□□□□□ -1.32
CPSF7-216ENST00000536548 POMZP3Q6PJE2 187 aa6.82□□□□□ -1.32
CPSF7-216ENST00000536548 DOK3Q7L591 496 aa6.82□□□□□ -1.32
CPSF7-216ENST00000536548 TMEM151BQ8IW70 566 aa6.82□□□□□ -1.32
CPSF7-216ENST00000536548 FOXRED2Q8IWF2 684 aa6.82□□□□□ -1.32
CPSF7-216ENST00000536548 ZNF610Q8N9Z0 462 aa6.82□□□□□ -1.32
CPSF7-216ENST00000536548 OR2AJ1Q8NGZ0 328 aa6.82□□□□□ -1.32
CPSF7-216ENST00000536548 MFSD8Q8NHS3 518 aa6.82□□□□□ -1.32
CPSF7-216ENST00000536548 GPBAR1Q8TDU6 330 aa6.82□□□□□ -1.32
CPSF7-216ENST00000536548 MMABQ96EY8 250 aaPredicted RBP6.82□□□□□ -1.32
CPSF7-216ENST00000536548 ADAT3Q96EY9 351 aaPredicted RBP6.82□□□□□ -1.32
CPSF7-216ENST00000536548 TCTN2Q96GX1 697 aa6.82□□□□□ -1.32
CPSF7-216ENST00000536548 ADOQ96SZ5 270 aa6.82□□□□□ -1.32
CPSF7-216ENST00000536548 GPER1Q99527 375 aa6.82□□□□□ -1.32
CPSF7-216ENST00000536548 NICN1Q9BSH3 213 aa6.82□□□□□ -1.32
CPSF7-216ENST00000536548 SUCNR1Q9BXA5 334 aa6.82□□□□□ -1.32
CPSF7-216ENST00000536548 CHST5Q9GZS9 411 aa6.82□□□□□ -1.32
CPSF7-216ENST00000536548 RAB33BQ9H082 229 aa6.82□□□□□ -1.32
CPSF7-216ENST00000536548 FOXJ2Q9P0K8 574 aa6.82□□□□□ -1.32
CPSF7-216ENST00000536548 TCFL5Q9UL49 500 aa6.82□□□□□ -1.32
CPSF7-216ENST00000536548 HDGFL3Q9Y3E1 203 aa6.82□□□□□ -1.32
CPSF7-216ENST00000536548 LSM5Q9Y4Y9 91 aaKnown RBP6.82□□□□□ -1.32
CPSF7-216ENST00000536548 CLDN16Q9Y5I7 305 aa6.82□□□□□ -1.32
CPSF7-216ENST00000536548 CCDC168Q8NDH2 2452 aa6.82□□□□□ -1.32
CPSF7-216ENST00000536548 HEATR5BQ9P2D3 2071 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 SHANK1Q9Y566 2161 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 TRBV23-1A0A0A0MS06 115 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 A0A0A6YYD4 124 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 A0A1W2PPE2 198 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 TLCD2A6NGC4 264 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 CRYM-AS1A6NIL9 109 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 ZNF587BE7ETH6 402 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 TSTD3H0UI37 97 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 PRAMEF26H0Y7S4 382 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 ST8SIA5O15466 376 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 SOCS1O15524 211 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 NME2P1O60361 137 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 TSPAN2O60636 221 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 MPZL1O95297 269 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 NME1P15531 152 aaKnown RBP6.81□□□□□ -1.32
CPSF7-216ENST00000536548 CCL1P22362 96 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 GLRA1P23415 457 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 ALDH3B1P43353 468 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 ZNF133P52736 654 aaPredicted RBP6.81□□□□□ -1.32
CPSF7-216ENST00000536548 SUMO3P55854 103 aaPredicted RBP6.81□□□□□ -1.32
CPSF7-216ENST00000536548 NDUFA6P56556 154 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 OR2B8PP59922 312 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 PKIAP61925 76 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 NKX6-1P78426 367 aaPredicted RBP6.81□□□□□ -1.32
CPSF7-216ENST00000536548 PLCXD2Q0VAA5 305 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 KLRB1Q12918 225 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 SQSTM1Q13501 440 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 ERV3-1Q14264 604 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 ZNF266Q14584 549 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 ZNF674Q2M3X9 581 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 DEFB110Q30KQ9 67 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 HIKESHIQ53FT3 197 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 NCMAPQ5T1S8 102 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 ETV3LQ6ZN32 361 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 H1FNTQ75WM6 255 aaPredicted RBP6.81□□□□□ -1.32
CPSF7-216ENST00000536548 REC114Q7Z4M0 266 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 COMMD2Q86X83 199 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 GKN2Q86XP6 184 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 DTX1Q86Y01 620 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 LINC00346Q8IVM7 164 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 FAM219AQ8IW50 185 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 SHISA5Q8N114 240 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 OR5AS1Q8N127 324 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 FAM89BQ8N5H3 189 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 ZNF383Q8NA42 475 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 BHLHE23Q8NDY6 225 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 OR51T1Q8NGJ9 327 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 STT3BQ8TCJ2 826 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 C11orf40Q8WZ69 217 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 ST8SIA1Q92185 356 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 ISOC2Q96AB3 205 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 ZNF775Q96BV0 537 aaPredicted RBP6.81□□□□□ -1.32
CPSF7-216ENST00000536548 MUCL1Q96DR8 90 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 GALNT14Q96FL9 552 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 KLHDC7BQ96G42 594 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 ARHGAP5-AS1Q96IT6 56 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 YPEL4Q96NS1 127 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 IP6K3Q96PC2 410 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 KCNK17Q96T54 332 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 RSRP1Q9BUV0 290 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 ST6GALNAC5Q9BVH7 336 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 SCRT1Q9BWW7 348 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 SMIM3Q9BZL3 60 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 PTGES2Q9H7Z7 377 aa6.81□□□□□ -1.32
CPSF7-216ENST00000536548 UCK1Q9HA47 277 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms