RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 ZNF561Q8N587 486 aa11.69□□□□□ -0.54
UBE3B-206ENST00000536398 DHRSXQ8N5I4 330 aa11.69□□□□□ -0.54
UBE3B-206ENST00000536398 PACRGLQ8N7B6 248 aa11.69□□□□□ -0.54
UBE3B-206ENST00000536398 DNAAF1Q8NEP3 725 aa11.69□□□□□ -0.54
UBE3B-206ENST00000536398 OR13C9Q8NGT0 318 aa11.69□□□□□ -0.54
UBE3B-206ENST00000536398 MRPL48Q96GC5 212 aaKnown RBP11.69□□□□□ -0.54
UBE3B-206ENST00000536398 DMRTB1Q96MA1 342 aa11.69□□□□□ -0.54
UBE3B-206ENST00000536398 RBFOX1Q9NWB1 397 aaKnown RBP11.69□□□□□ -0.54
UBE3B-206ENST00000536398 SIRT4Q9Y6E7 314 aaPredicted RBP11.69□□□□□ -0.54
UBE3B-206ENST00000536398 IGKV1-12A0A0C4DH73 117 aa11.68□□□□□ -0.54
UBE3B-206ENST00000536398 TMEM82A0PJX8 343 aa11.68□□□□□ -0.54
UBE3B-206ENST00000536398 M0R1W7 72 aa11.68□□□□□ -0.54
UBE3B-206ENST00000536398 SLC1A7O00341 560 aa11.68□□□□□ -0.54
UBE3B-206ENST00000536398 ANGPTL7O43827 346 aa11.68□□□□□ -0.54
UBE3B-206ENST00000536398 IGKV1D-12P01611 117 aa11.68□□□□□ -0.54
UBE3B-206ENST00000536398 TK1P04183 234 aa11.68□□□□□ -0.54
UBE3B-206ENST00000536398 CCL3L1P16619 93 aa11.68□□□□□ -0.54
UBE3B-206ENST00000536398 DUSP1P28562 367 aa11.68□□□□□ -0.54
UBE3B-206ENST00000536398 GBX2P52951 348 aaPredicted RBP11.68□□□□□ -0.54
UBE3B-206ENST00000536398 ATP1B3P54709 279 aa11.68□□□□□ -0.54
UBE3B-206ENST00000536398 SNU13P55769 128 aaKnown RBP11.68□□□□□ -0.54
UBE3B-206ENST00000536398 RPL31P62899 125 aaKnown RBP11.68□□□□□ -0.54
UBE3B-206ENST00000536398 OGFRL1Q5TC84 451 aaPredicted RBP11.68□□□□□ -0.54
UBE3B-206ENST00000536398 TTC23Q5W5X9 447 aa11.68□□□□□ -0.54
UBE3B-206ENST00000536398 LAIR2Q6ISS4 152 aa11.68□□□□□ -0.54
UBE3B-206ENST00000536398 C16orf87Q6PH81 154 aa11.68□□□□□ -0.54
UBE3B-206ENST00000536398 METAP1DQ6UB28 335 aaPredicted RBP11.68□□□□□ -0.54
UBE3B-206ENST00000536398 C11orf42Q8N5U0 333 aa11.68□□□□□ -0.54
UBE3B-206ENST00000536398 C3orf56Q8N813 242 aa11.68□□□□□ -0.54
UBE3B-206ENST00000536398 OR5AK2Q8NH90 309 aa11.68□□□□□ -0.54
UBE3B-206ENST00000536398 RGP1Q92546 391 aaPredicted RBP11.68□□□□□ -0.54
UBE3B-206ENST00000536398 OPALINQ96PE5 141 aa11.68□□□□□ -0.54
UBE3B-206ENST00000536398 JAM3Q9BX67 310 aa11.68□□□□□ -0.54
UBE3B-206ENST00000536398 CHIAQ9BZP6 476 aa11.68□□□□□ -0.54
UBE3B-206ENST00000536398 ZMAT3Q9HA38 289 aaKnown RBP11.68□□□□□ -0.54
UBE3B-206ENST00000536398 NOX4Q9NPH5 578 aa11.68□□□□□ -0.54
UBE3B-206ENST00000536398 NKX1-2Q9UD57 310 aaPredicted RBP11.68□□□□□ -0.54
UBE3B-206ENST00000536398 CLEC2DQ9UHP7 191 aa11.68□□□□□ -0.54
UBE3B-206ENST00000536398 TRBV23-1A0A0A0MS06 115 aa11.67□□□□□ -0.54
UBE3B-206ENST00000536398 TRBV2A0A0J9YWF9 115 aa11.67□□□□□ -0.54
UBE3B-206ENST00000536398 H0YAE9 185 aa11.67□□□□□ -0.54
UBE3B-206ENST00000536398 K7N7A8 449 aa11.67□□□□□ -0.54
UBE3B-206ENST00000536398 CASQ2O14958 399 aaPredicted RBP11.67□□□□□ -0.54
UBE3B-206ENST00000536398 NPFFO15130 113 aa11.67□□□□□ -0.54
UBE3B-206ENST00000536398 ZNF737O75373 536 aa11.67□□□□□ -0.54
UBE3B-206ENST00000536398 IGHV4-59P01825 116 aa11.67□□□□□ -0.54
UBE3B-206ENST00000536398 PIPP12273 146 aaPredicted RBP11.67□□□□□ -0.54
UBE3B-206ENST00000536398 PRKACBP22694 351 aa11.67□□□□□ -0.54
UBE3B-206ENST00000536398 OMGP23515 440 aa11.67□□□□□ -0.54
UBE3B-206ENST00000536398 PDZK1IP1Q13113 114 aa11.67□□□□□ -0.54
UBE3B-206ENST00000536398 ZNF273Q14593 569 aa11.67□□□□□ -0.54
UBE3B-206ENST00000536398 C1orf122Q6ZSJ8 110 aa11.67□□□□□ -0.54
UBE3B-206ENST00000536398 LHFPL2Q6ZUX7 228 aa11.67□□□□□ -0.54
UBE3B-206ENST00000536398 MKXQ8IYA7 352 aa11.67□□□□□ -0.54
UBE3B-206ENST00000536398 ASCC1Q8N9N2 400 aaKnown RBP11.67□□□□□ -0.54
UBE3B-206ENST00000536398 OR5D18Q8NGL1 313 aa11.67□□□□□ -0.54
UBE3B-206ENST00000536398 C17orf50Q8WW18 174 aa11.67□□□□□ -0.54
UBE3B-206ENST00000536398 GGHQ92820 318 aa11.67□□□□□ -0.54
UBE3B-206ENST00000536398 EMG1Q92979 244 aaKnown RBP11.67□□□□□ -0.54
UBE3B-206ENST00000536398 ZCCHC4Q9H5U6 513 aa11.67□□□□□ -0.54
UBE3B-206ENST00000536398 FAM181BA6NEQ2 426 aa11.66□□□□□ -0.54
UBE3B-206ENST00000536398 TMEM212A6NML5 194 aa11.66□□□□□ -0.54
UBE3B-206ENST00000536398 LALBAP00709 142 aa11.66□□□□□ -0.54
UBE3B-206ENST00000536398 CHRM2P08172 466 aa11.66□□□□□ -0.54
UBE3B-206ENST00000536398 PAX6P26367 422 aa11.66□□□□□ -0.54
UBE3B-206ENST00000536398 DCKP27707 260 aa11.66□□□□□ -0.54
UBE3B-206ENST00000536398 CAPGP40121 348 aa11.66□□□□□ -0.54
UBE3B-206ENST00000536398 SOX2P48431 317 aa11.66□□□□□ -0.54
UBE3B-206ENST00000536398 ASPHD2Q6ICH7 369 aa11.66□□□□□ -0.54
UBE3B-206ENST00000536398 FIP1L1Q6UN15 594 aaKnown RBP11.66□□□□□ -0.54
UBE3B-206ENST00000536398 C17orf107Q6ZR85 190 aa11.66□□□□□ -0.54
UBE3B-206ENST00000536398 SPSB1Q96BD6 273 aa11.66□□□□□ -0.54
UBE3B-206ENST00000536398 MYCBPQ99417 103 aaPredicted RBP11.66□□□□□ -0.54
UBE3B-206ENST00000536398 METTL8Q9H825 291 aaKnown RBP11.66□□□□□ -0.54
UBE3B-206ENST00000536398 C8orf4Q9NR00 106 aa11.66□□□□□ -0.54
UBE3B-206ENST00000536398 DIMT1Q9UNQ2 313 aaKnown RBP11.66□□□□□ -0.54
UBE3B-206ENST00000536398 DHDHQ9UQ10 334 aa11.66□□□□□ -0.54
UBE3B-206ENST00000536398 FBN3Q75N90 2809 aa11.65□□□□□ -0.54
UBE3B-206ENST00000536398 XPNPEP2O43895 674 aa11.65□□□□□ -0.54
UBE3B-206ENST00000536398 PSPNO60542 156 aa11.65□□□□□ -0.54
UBE3B-206ENST00000536398 HAND1O96004 215 aa11.65□□□□□ -0.54
UBE3B-206ENST00000536398 MT-ND2P03891 347 aa11.65□□□□□ -0.54
UBE3B-206ENST00000536398 CCDC159P0C7I6 412 aa11.65□□□□□ -0.54
UBE3B-206ENST00000536398 OCM2P0CE71 109 aa11.65□□□□□ -0.54
UBE3B-206ENST00000536398 OCMP0CE72 109 aaPredicted RBP11.65□□□□□ -0.54
UBE3B-206ENST00000536398 PRKACAP17612 351 aa11.65□□□□□ -0.54
UBE3B-206ENST00000536398 IER3P46695 156 aa11.65□□□□□ -0.54
UBE3B-206ENST00000536398 UBE2E1P51965 193 aa11.65□□□□□ -0.54
UBE3B-206ENST00000536398 GUCA2AQ02747 115 aa11.65□□□□□ -0.54
UBE3B-206ENST00000536398 MRPL28Q13084 256 aaKnown RBP11.65□□□□□ -0.54
UBE3B-206ENST00000536398 IL18R1Q13478 541 aa11.65□□□□□ -0.54
UBE3B-206ENST00000536398 BLMHQ13867 455 aa11.65□□□□□ -0.54
UBE3B-206ENST00000536398 DOC2BQ14184 412 aa11.65□□□□□ -0.54
UBE3B-206ENST00000536398 CDK5R1Q15078 307 aa11.65□□□□□ -0.54
UBE3B-206ENST00000536398 FAM58AQ8N1B3 248 aa11.65□□□□□ -0.54
UBE3B-206ENST00000536398 PARP16Q8N5Y8 322 aa11.65□□□□□ -0.54
UBE3B-206ENST00000536398 TPRX1Q8N7U7 411 aa11.65□□□□□ -0.54
UBE3B-206ENST00000536398 SETD9Q8NE22 299 aa11.65□□□□□ -0.54
UBE3B-206ENST00000536398 OR52N4Q8NGI2 321 aa11.65□□□□□ -0.54
UBE3B-206ENST00000536398 TSEN15Q8WW01 171 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms