RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 OR2AT4A6NND4 320 aa10.05□□□□□ -0.8
CHD4-203ENST00000535717 B4DSR2 109 aa10.05□□□□□ -0.8
CHD4-203ENST00000535717 CCRL2O00421 344 aa10.05□□□□□ -0.8
CHD4-203ENST00000535717 GABRPO00591 440 aa10.05□□□□□ -0.8
CHD4-203ENST00000535717 ADAM20O43506 726 aa10.05□□□□□ -0.8
CHD4-203ENST00000535717 FCN3O75636 299 aa10.05□□□□□ -0.8
CHD4-203ENST00000535717 CYB5AP00167 134 aa10.05□□□□□ -0.8
CHD4-203ENST00000535717 TGFAP01135 160 aa10.05□□□□□ -0.8
CHD4-203ENST00000535717 MAS1P04201 325 aa10.05□□□□□ -0.8
CHD4-203ENST00000535717 HNRNPCP07910 306 aaKnown RBP eCLIP10.05□□□□□ -0.8
CHD4-203ENST00000535717 DUX4L2P0CJ85 424 aa10.05□□□□□ -0.8
CHD4-203ENST00000535717 DUX4L3P0CJ86 424 aa10.05□□□□□ -0.8
CHD4-203ENST00000535717 DUX4L4P0CJ87 422 aa10.05□□□□□ -0.8
CHD4-203ENST00000535717 DUX4L5P0CJ88 424 aa10.05□□□□□ -0.8
CHD4-203ENST00000535717 DUX4L6P0CJ89 424 aa10.05□□□□□ -0.8
CHD4-203ENST00000535717 DUX4L7P0CJ90 424 aa10.05□□□□□ -0.8
CHD4-203ENST00000535717 TMEM225BP0DP42 221 aa10.05□□□□□ -0.8
CHD4-203ENST00000535717 PSG2P11465 335 aa10.05□□□□□ -0.8
CHD4-203ENST00000535717 BCL3P20749 454 aa10.05□□□□□ -0.8
CHD4-203ENST00000535717 CPT2P23786 658 aa10.05□□□□□ -0.8
CHD4-203ENST00000535717 ZFP36P26651 326 aaKnown RBP10.05□□□□□ -0.8
CHD4-203ENST00000535717 PITPNBP48739 271 aa10.05□□□□□ -0.8
CHD4-203ENST00000535717 SMIM21Q3B7S5 101 aa10.05□□□□□ -0.8
CHD4-203ENST00000535717 SYT6Q5T7P8 510 aaPredicted RBP10.05□□□□□ -0.8
CHD4-203ENST00000535717 ATPAF1Q5TC12 328 aaPredicted RBP10.05□□□□□ -0.8
CHD4-203ENST00000535717 DUX4L9Q6RFH8 374 aaPredicted RBP10.05□□□□□ -0.8
CHD4-203ENST00000535717 ZNF841Q6ZN19 808 aa10.05□□□□□ -0.8
CHD4-203ENST00000535717 Q71RC1 249 aaPredicted RBP10.05□□□□□ -0.8
CHD4-203ENST00000535717 C1QL2Q7Z5L3 287 aa10.05□□□□□ -0.8
CHD4-203ENST00000535717 SAXO1Q8IYX7 474 aa10.05□□□□□ -0.8
CHD4-203ENST00000535717 OR8B3Q8NGG8 313 aa10.05□□□□□ -0.8
CHD4-203ENST00000535717 ANGPTL6Q8NI99 470 aa10.05□□□□□ -0.8
CHD4-203ENST00000535717 MUL1Q969V5 352 aa10.05□□□□□ -0.8
CHD4-203ENST00000535717 CPNE2Q96FN4 548 aaPredicted RBP10.05□□□□□ -0.8
CHD4-203ENST00000535717 OR8B2Q96RD0 313 aa10.05□□□□□ -0.8
CHD4-203ENST00000535717 GPER1Q99527 375 aa10.05□□□□□ -0.8
CHD4-203ENST00000535717 RBFOX1Q9NWB1 397 aaKnown RBP10.05□□□□□ -0.8
CHD4-203ENST00000535717 KAAG1Q9UBP8 84 aa10.05□□□□□ -0.8
CHD4-203ENST00000535717 DUX4Q9UBX2 424 aa10.05□□□□□ -0.8
CHD4-203ENST00000535717 ARHGAP32A7KAX9 2087 aa10.04□□□□□ -0.8
CHD4-203ENST00000535717 KIAA1324LA8MWY0 1029 aaPredicted RBP10.04□□□□□ -0.8
CHD4-203ENST00000535717 TRAPPC2LH3BP13 241 aa10.04□□□□□ -0.8
CHD4-203ENST00000535717 TMPRSS2O15393 492 aa10.04□□□□□ -0.8
CHD4-203ENST00000535717 PHF1O43189 567 aaPredicted RBP10.04□□□□□ -0.8
CHD4-203ENST00000535717 KDM4BO94953 1096 aa10.04□□□□□ -0.8
CHD4-203ENST00000535717 MSMBP08118 114 aa10.04□□□□□ -0.8
CHD4-203ENST00000535717 CALCBP10092 127 aa10.04□□□□□ -0.8
CHD4-203ENST00000535717 ADRA2CP18825 462 aa10.04□□□□□ -0.8
CHD4-203ENST00000535717 SRMP19623 302 aa10.04□□□□□ -0.8
CHD4-203ENST00000535717 ZNF93P35789 620 aaPredicted RBP10.04□□□□□ -0.8
CHD4-203ENST00000535717 PTGFRP43088 359 aa10.04□□□□□ -0.8
CHD4-203ENST00000535717 OR3A4PP47883 348 aa10.04□□□□□ -0.8
CHD4-203ENST00000535717 ALDH3B2P48448 385 aa10.04□□□□□ -0.8
CHD4-203ENST00000535717 LCN2P80188 198 aa10.04□□□□□ -0.8
CHD4-203ENST00000535717 HSD17B12Q53GQ0 312 aa10.04□□□□□ -0.8
CHD4-203ENST00000535717 ESCO2Q56NI9 601 aa10.04□□□□□ -0.8
CHD4-203ENST00000535717 CD200R1LQ6Q8B3 271 aa10.04□□□□□ -0.8
CHD4-203ENST00000535717 ZNF788Q6ZQV5 615 aa10.04□□□□□ -0.8
CHD4-203ENST00000535717 NLRC3Q7RTR2 1065 aa10.04□□□□□ -0.8
CHD4-203ENST00000535717 LRRTM1Q86UE6 522 aa10.04□□□□□ -0.8
CHD4-203ENST00000535717 LYPD6Q86Y78 171 aa10.04□□□□□ -0.8
CHD4-203ENST00000535717 LURAP1LQ8IV03 231 aa10.04□□□□□ -0.8
CHD4-203ENST00000535717 FAM216BQ8N7L0 139 aa10.04□□□□□ -0.8
CHD4-203ENST00000535717 ZSCAN4Q8NAM6 433 aaPredicted RBP10.04□□□□□ -0.8
CHD4-203ENST00000535717 TNFAIP8L1Q8WVP5 186 aa10.04□□□□□ -0.8
CHD4-203ENST00000535717 PHYHIPQ92561 330 aa10.04□□□□□ -0.8
CHD4-203ENST00000535717 GAFA1Q96PS6 74 aa10.04□□□□□ -0.8
CHD4-203ENST00000535717 DNTTIP1Q9H147 329 aa10.04□□□□□ -0.8
CHD4-203ENST00000535717 SMURF1Q9HCE7 757 aa10.04□□□□□ -0.8
CHD4-203ENST00000535717 TCF7L1Q9HCS4 588 aa10.04□□□□□ -0.8
CHD4-203ENST00000535717 RHBDL2Q9NX52 303 aa10.04□□□□□ -0.8
CHD4-203ENST00000535717 IL36RNQ9UBH0 155 aa10.04□□□□□ -0.8
CHD4-203ENST00000535717 ZNF222Q9UK12 451 aa10.04□□□□□ -0.8
CHD4-203ENST00000535717 NF1P21359 2839 aa10.04□□□□□ -0.8
CHD4-203ENST00000535717 HIVEP2P31629 2446 aa10.04□□□□□ -0.8
CHD4-203ENST00000535717 ANK3Q12955 4377 aaKnown RBP10.04□□□□□ -0.8
CHD4-203ENST00000535717 SETD2Q9BYW2 2564 aaPredicted RBP10.04□□□□□ -0.8
CHD4-203ENST00000535717 TRDV1A0A1B0GX56 115 aa10.03□□□□□ -0.8
CHD4-203ENST00000535717 RFPL4AA6NLU0 287 aa10.03□□□□□ -0.8
CHD4-203ENST00000535717 A8MXK9 166 aa10.03□□□□□ -0.8
CHD4-203ENST00000535717 RFPL4AL1F8VTS6 287 aa10.03□□□□□ -0.8
CHD4-203ENST00000535717 DVL1O14640 695 aa10.03□□□□□ -0.8
CHD4-203ENST00000535717 FOXH1O75593 365 aa10.03□□□□□ -0.8
CHD4-203ENST00000535717 ARL6IP5O75915 188 aa10.03□□□□□ -0.8
CHD4-203ENST00000535717 KNG1P01042 644 aa10.03□□□□□ -0.8
CHD4-203ENST00000535717 SFTPBP07988 381 aa10.03□□□□□ -0.8
CHD4-203ENST00000535717 SELLP14151 372 aa10.03□□□□□ -0.8
CHD4-203ENST00000535717 PRDX2P32119 198 aa10.03□□□□□ -0.8
CHD4-203ENST00000535717 GABRA2P47869 451 aa10.03□□□□□ -0.8
CHD4-203ENST00000535717 CEBPDP49716 269 aaPredicted RBP10.03□□□□□ -0.8
CHD4-203ENST00000535717 GNB2P62879 340 aa10.03□□□□□ -0.8
CHD4-203ENST00000535717 WDR25Q64LD2 544 aaPredicted RBP10.03□□□□□ -0.8
CHD4-203ENST00000535717 ASCL4Q6XD76 172 aa10.03□□□□□ -0.8
CHD4-203ENST00000535717 SLC36A1Q7Z2H8 476 aa10.03□□□□□ -0.8
CHD4-203ENST00000535717 CDH26Q8IXH8 852 aa10.03□□□□□ -0.8
CHD4-203ENST00000535717 Q8IYB0 196 aa10.03□□□□□ -0.8
CHD4-203ENST00000535717 FAM58AQ8N1B3 248 aa10.03□□□□□ -0.8
CHD4-203ENST00000535717 FGFRL1Q8N441 504 aa10.03□□□□□ -0.8
CHD4-203ENST00000535717 JAGN1Q8N5M9 183 aa10.03□□□□□ -0.8
CHD4-203ENST00000535717 CD177Q8N6Q3 437 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms