RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 DOK5Q9P104 306 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 PRODH2Q9UF12 536 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 SLC23A2Q9UGH3 650 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 SERGEFQ9UGK8 458 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 R4GMQ9 66 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 V9GYS6 101 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 BDP1A6H8Y1 2624 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 H0YIZ8 118 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 ZNF264O43296 627 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 CA11O75493 328 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 DEDDO75618 318 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 SEMA4FO95754 770 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 PMP2P02689 132 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 NGFRP08138 427 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 SMIM10L1P0DMW3 83 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 AKT2P31751 481 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 CCKARP32238 428 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 AKR1C3P42330 323 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 CXCL12P48061 93 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 EMP2P54851 167 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 SRPXP78539 464 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 TLE4Q04727 773 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 ARFRP1Q13795 201 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 GNMTQ14749 295 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 SLC9A3R2Q15599 337 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 ODF4Q2M2E3 257 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 IAH1Q2TAA2 248 aaPredicted RBP5.75□□□□□ -1.49
USP28-202ENST00000535607 POM121L1PQ3SYA9 428 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 CHRFAM7AQ494W8 412 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 HIKESHIQ53FT3 197 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 MESTQ5EB52 335 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 STPG1Q5TH74 334 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 GGNBP1Q5YKI7 109 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 OR2A2Q6IF42 318 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 FBXO42Q6P3S6 717 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 GKN2Q86XP6 184 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 C9orf40Q8IXQ3 194 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 CSNK1A1LQ8N752 337 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 ZNF283Q8N7M2 679 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 CADM4Q8NFZ8 388 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 OR4S1Q8NGB4 309 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 OR52N5Q8NH56 324 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 RNASEH2CQ8TDP1 164 aaKnown RBP5.75□□□□□ -1.49
USP28-202ENST00000535607 ST7LQ8TDW4 575 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 ISOC2Q96AB3 205 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 SLC25A36Q96CQ1 311 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 MUCL1Q96DR8 90 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 TM4SF19Q96DZ7 209 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 GNPNAT1Q96EK6 184 aaPredicted RBP5.75□□□□□ -1.49
USP28-202ENST00000535607 DAZAP1Q96EP5 407 aaKnown RBP5.75□□□□□ -1.49
USP28-202ENST00000535607 SMIM10Q96HG1 83 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 NDUFAF3Q9BU61 184 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 ULBP3Q9BZM4 244 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 ACTR3CQ9C0K3 210 aaPredicted RBP5.75□□□□□ -1.49
USP28-202ENST00000535607 CTDSP1Q9GZU7 261 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 AICDAQ9GZX7 198 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 RAB33BQ9H082 229 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 MOB1AQ9H8S9 216 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 DLL3Q9NYJ7 618 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 WSB2Q9NYS7 404 aaPredicted RBP5.75□□□□□ -1.49
USP28-202ENST00000535607 OR5AC2Q9NZP5 309 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 FBXL17Q9UF56 701 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 OR52A1Q9UKL2 312 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 ANAPC10Q9UM13 185 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 KLHDC2Q9Y2U9 406 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 AMDHD2Q9Y303 409 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 UBE2J1Q9Y385 318 aaPredicted RBP5.75□□□□□ -1.49
USP28-202ENST00000535607 HDGFL3Q9Y3E1 203 aa5.75□□□□□ -1.49
USP28-202ENST00000535607 PUS1Q9Y606 427 aaKnown RBP eCLIP5.75□□□□□ -1.49
USP28-202ENST00000535607 TRAV36DV7A0A075B6V5 113 aa5.74□□□□□ -1.49
USP28-202ENST00000535607 A0A087WZY1 265 aa5.74□□□□□ -1.49
USP28-202ENST00000535607 NPIPA5A0A0B4J1W7 369 aa5.74□□□□□ -1.49
USP28-202ENST00000535607 IGHV1OR15-9A0A0B4J2B8 117 aa5.74□□□□□ -1.49
USP28-202ENST00000535607 RBFOX3A6NFN3 312 aa5.74□□□□□ -1.49
USP28-202ENST00000535607 ZNF726A6NNF4 738 aa5.74□□□□□ -1.49
USP28-202ENST00000535607 CDRT15L2A8MXV6 281 aa5.74□□□□□ -1.49
USP28-202ENST00000535607 FTCDNL1E5RQL4 147 aa5.74□□□□□ -1.49
USP28-202ENST00000535607 NPIPA7E9PJI5 369 aa5.74□□□□□ -1.49
USP28-202ENST00000535607 M0R143 59 aa5.74□□□□□ -1.49
USP28-202ENST00000535607 M0R296 226 aa5.74□□□□□ -1.49
USP28-202ENST00000535607 CLDN4O14493 209 aa5.74□□□□□ -1.49
USP28-202ENST00000535607 TNFSF14O43557 240 aa5.74□□□□□ -1.49
USP28-202ENST00000535607 NME2P1O60361 137 aa5.74□□□□□ -1.49
USP28-202ENST00000535607 YIF1AO95070 293 aa5.74□□□□□ -1.49
USP28-202ENST00000535607 FSHBP01225 129 aa5.74□□□□□ -1.49
USP28-202ENST00000535607 MBPP02686 304 aaPredicted RBP5.74□□□□□ -1.49
USP28-202ENST00000535607 OPN1MWP04001 364 aa5.74□□□□□ -1.49
USP28-202ENST00000535607 HSPB1P04792 205 aaKnown RBP5.74□□□□□ -1.49
USP28-202ENST00000535607 ARG1P05089 322 aa5.74□□□□□ -1.49
USP28-202ENST00000535607 HEXBP07686 556 aa5.74□□□□□ -1.49
USP28-202ENST00000535607 H2BFMP0C1H6 154 aa5.74□□□□□ -1.49
USP28-202ENST00000535607 ASAH2BP0C7U1 165 aa5.74□□□□□ -1.49
USP28-202ENST00000535607 METTL15P1P0C7V9 234 aa5.74□□□□□ -1.49
USP28-202ENST00000535607 RNF224P0DH78 156 aa5.74□□□□□ -1.49
USP28-202ENST00000535607 NPIPA8P0DM63 369 aa5.74□□□□□ -1.49
USP28-202ENST00000535607 OPN1MW2P0DN77 364 aa5.74□□□□□ -1.49
USP28-202ENST00000535607 OPN1MW3P0DN78 364 aa5.74□□□□□ -1.49
USP28-202ENST00000535607 FOLR1P15328 257 aa5.74□□□□□ -1.49
USP28-202ENST00000535607 HNRNPA2B1P22626 353 aaKnown RBP5.74□□□□□ -1.49
USP28-202ENST00000535607 PLA2G5P39877 138 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms