RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 GNG4P50150 75 aa16.12■□□□□ 0.17
SFSWAP-203ENST00000535236 GAMTQ14353 236 aa16.12■□□□□ 0.17
SFSWAP-203ENST00000535236 RASL11BQ9BPW5 248 aa16.12■□□□□ 0.17
SFSWAP-203ENST00000535236 ZMIZ1Q9ULJ6 1067 aa16.12■□□□□ 0.17
SFSWAP-203ENST00000535236 C21orf140B9A014 251 aa16.11■□□□□ 0.17
SFSWAP-203ENST00000535236 PLPP2O43688 288 aa16.11■□□□□ 0.17
SFSWAP-203ENST00000535236 WNT3P56703 355 aa16.11■□□□□ 0.17
SFSWAP-203ENST00000535236 FOXO1Q12778 655 aa16.11■□□□□ 0.17
SFSWAP-203ENST00000535236 Q7L0L9 218 aa16.11■□□□□ 0.17
SFSWAP-203ENST00000535236 HOXB3P14651 431 aaPredicted RBP16.11■□□□□ 0.17
SFSWAP-203ENST00000535236 MAGEA5P43359 124 aa16.11■□□□□ 0.17
SFSWAP-203ENST00000535236 SIGLEC14Q08ET2 396 aa16.11■□□□□ 0.17
SFSWAP-203ENST00000535236 VAMP3Q15836 100 aa16.11■□□□□ 0.17
SFSWAP-203ENST00000535236 WDR74Q6RFH5 385 aaPredicted RBP16.11■□□□□ 0.17
SFSWAP-203ENST00000535236 VN1R4Q7Z5H5 301 aa16.11■□□□□ 0.17
SFSWAP-203ENST00000535236 VSTM2AQ8TAG5 236 aa16.11■□□□□ 0.17
SFSWAP-203ENST00000535236 CACNA1SQ13698 1873 aa16.11■□□□□ 0.17
SFSWAP-203ENST00000535236 A0A1B0GUL6 1792 aa16.11■□□□□ 0.17
SFSWAP-203ENST00000535236 MRPS11P82912 194 aaKnown RBP16.11■□□□□ 0.17
SFSWAP-203ENST00000535236 NAA60Q9H7X0 242 aa16.11■□□□□ 0.17
SFSWAP-203ENST00000535236 NDUFB6O95139 128 aa16.11■□□□□ 0.17
SFSWAP-203ENST00000535236 CT62P0C5K7 136 aa16.11■□□□□ 0.17
SFSWAP-203ENST00000535236 ORM2P19652 201 aa16.11■□□□□ 0.17
SFSWAP-203ENST00000535236 C3AR1Q16581 482 aa16.11■□□□□ 0.17
SFSWAP-203ENST00000535236 MIDNQ504T8 468 aa16.11■□□□□ 0.17
SFSWAP-203ENST00000535236 ZNF680Q8NEM1 530 aa16.11■□□□□ 0.17
SFSWAP-203ENST00000535236 OR4S2Q8NH73 311 aa16.11■□□□□ 0.17
SFSWAP-203ENST00000535236 RASL10BQ96S79 203 aa16.11■□□□□ 0.17
SFSWAP-203ENST00000535236 TUBAL3A6NHL2 446 aa16.11■□□□□ 0.17
SFSWAP-203ENST00000535236 ZNF561Q8N587 486 aa16.11■□□□□ 0.17
SFSWAP-203ENST00000535236 COMMD1Q8N668 190 aa16.11■□□□□ 0.17
SFSWAP-203ENST00000535236 OR5C1Q8NGR4 320 aa16.11■□□□□ 0.17
SFSWAP-203ENST00000535236 OR5R1Q8NH85 324 aa16.11■□□□□ 0.17
SFSWAP-203ENST00000535236 PTP4A1Q93096 173 aa16.11■□□□□ 0.17
SFSWAP-203ENST00000535236 FAM60AQ9NP50 221 aa16.11■□□□□ 0.17
SFSWAP-203ENST00000535236 EXOGQ9Y2C4 368 aaKnown RBP16.11■□□□□ 0.17
SFSWAP-203ENST00000535236 POMT1Q9Y6A1 747 aa16.11■□□□□ 0.17
SFSWAP-203ENST00000535236 CD200P41217 278 aa16.1■□□□□ 0.17
SFSWAP-203ENST00000535236 RNASEKQ6P5S7 137 aaKnown RBP16.1■□□□□ 0.17
SFSWAP-203ENST00000535236 ASB10Q8WXI3 467 aa16.1■□□□□ 0.17
SFSWAP-203ENST00000535236 COX14Q96I36 57 aa16.1■□□□□ 0.17
SFSWAP-203ENST00000535236 OCEL1Q9H607 264 aa16.1■□□□□ 0.17
SFSWAP-203ENST00000535236 SAP30LQ9HAJ7 183 aa16.1■□□□□ 0.17
SFSWAP-203ENST00000535236 KCNMB2Q9Y691 235 aa16.1■□□□□ 0.17
SFSWAP-203ENST00000535236 PLCH1Q4KWH8 1693 aa16.1■□□□□ 0.17
SFSWAP-203ENST00000535236 RNASEK-C17orf49H0YIS7 233 aa16.1■□□□□ 0.17
SFSWAP-203ENST00000535236 SFTA3P0C7M3 94 aa16.1■□□□□ 0.17
SFSWAP-203ENST00000535236 TUSC5Q8IXB3 177 aa16.1■□□□□ 0.17
SFSWAP-203ENST00000535236 SF3B5Q9BWJ5 86 aaKnown RBP16.1■□□□□ 0.17
SFSWAP-203ENST00000535236 AKIP1Q9NQ31 210 aa16.1■□□□□ 0.17
SFSWAP-203ENST00000535236 PTHLHP12272 177 aa16.1■□□□□ 0.17
SFSWAP-203ENST00000535236 CCL4P13236 92 aa16.1■□□□□ 0.17
SFSWAP-203ENST00000535236 CBLN3Q6UW01 205 aa16.1■□□□□ 0.17
SFSWAP-203ENST00000535236 CTLA4P16410 223 aa16.1■□□□□ 0.17
SFSWAP-203ENST00000535236 C1RLQ9NZP8 487 aa16.1■□□□□ 0.17
SFSWAP-203ENST00000535236 PAPPA2Q9BXP8 1791 aa16.09■□□□□ 0.17
SFSWAP-203ENST00000535236 MPZL1O95297 269 aa16.09■□□□□ 0.17
SFSWAP-203ENST00000535236 GUK1Q16774 197 aa16.09■□□□□ 0.17
SFSWAP-203ENST00000535236 TEX50A0A1B0GTY4 177 aa16.09■□□□□ 0.17
SFSWAP-203ENST00000535236 MAP1LC3B2A6NCE7 125 aa16.09■□□□□ 0.17
SFSWAP-203ENST00000535236 CTAG2O75638 210 aa16.09■□□□□ 0.17
SFSWAP-203ENST00000535236 CD82P27701 267 aa16.09■□□□□ 0.17
SFSWAP-203ENST00000535236 OR1B1Q8NGR6 318 aa16.09■□□□□ 0.17
SFSWAP-203ENST00000535236 LILRB1Q8NHL6 650 aaPredicted RBP16.09■□□□□ 0.17
SFSWAP-203ENST00000535236 MAP1LC3BQ9GZQ8 125 aa16.09■□□□□ 0.17
SFSWAP-203ENST00000535236 TREM2Q9NZC2 230 aa16.09■□□□□ 0.17
SFSWAP-203ENST00000535236 G0S2P27469 103 aa16.09■□□□□ 0.17
SFSWAP-203ENST00000535236 TUSC1Q2TAM9 212 aa16.09■□□□□ 0.17
SFSWAP-203ENST00000535236 DGAT2L7PQ6IED9 249 aa16.09■□□□□ 0.17
SFSWAP-203ENST00000535236 OIT3Q8WWZ8 545 aa16.09■□□□□ 0.17
SFSWAP-203ENST00000535236 ALG14Q96F25 216 aa16.09■□□□□ 0.17
SFSWAP-203ENST00000535236 ATP5SQ99766 215 aa16.09■□□□□ 0.17
SFSWAP-203ENST00000535236 SIRT5Q9NXA8 310 aa16.09■□□□□ 0.17
SFSWAP-203ENST00000535236 A0A1B0GTH9 108 aa16.09■□□□□ 0.17
SFSWAP-203ENST00000535236 ASPDHA6ND91 283 aa16.09■□□□□ 0.17
SFSWAP-203ENST00000535236 GATCO43716 136 aaKnown RBP16.09■□□□□ 0.17
SFSWAP-203ENST00000535236 SCO1O75880 301 aa16.09■□□□□ 0.17
SFSWAP-203ENST00000535236 CNTD2Q9H8S5 307 aa16.09■□□□□ 0.17
SFSWAP-203ENST00000535236 NAT8BQ9UHF3 227 aa16.09■□□□□ 0.17
SFSWAP-203ENST00000535236 MMP7P09237 267 aaPredicted RBP16.08■□□□□ 0.17
SFSWAP-203ENST00000535236 FABP4P15090 132 aa16.08■□□□□ 0.17
SFSWAP-203ENST00000535236 USF1P22415 310 aaPredicted RBP16.08■□□□□ 0.17
SFSWAP-203ENST00000535236 CDC34P49427 236 aaPredicted RBP16.08■□□□□ 0.17
SFSWAP-203ENST00000535236 RANP62826 216 aaKnown RBP16.08■□□□□ 0.17
SFSWAP-203ENST00000535236 MOGAT3Q86VF5 341 aa16.08■□□□□ 0.17
SFSWAP-203ENST00000535236 ZG16BQ96DA0 208 aa16.08■□□□□ 0.17
SFSWAP-203ENST00000535236 ALS2Q96Q42 1657 aa16.08■□□□□ 0.17
SFSWAP-203ENST00000535236 PNPP00491 289 aa16.08■□□□□ 0.17
SFSWAP-203ENST00000535236 WNT1P04628 370 aa16.08■□□□□ 0.17
SFSWAP-203ENST00000535236 HTR1DP28221 377 aa16.08■□□□□ 0.17
SFSWAP-203ENST00000535236 FGF9P31371 208 aaPredicted RBP16.08■□□□□ 0.17
SFSWAP-203ENST00000535236 GZMKP49863 264 aa16.08■□□□□ 0.17
SFSWAP-203ENST00000535236 FAM109BQ6ICB4 259 aaPredicted RBP16.08■□□□□ 0.17
SFSWAP-203ENST00000535236 SH2D2AQ9NP31 389 aa16.08■□□□□ 0.17
SFSWAP-203ENST00000535236 HYAL3O43820 417 aaPredicted RBP16.08■□□□□ 0.16
SFSWAP-203ENST00000535236 GALP22466 123 aa16.08■□□□□ 0.16
SFSWAP-203ENST00000535236 SPCS3P61009 180 aa16.08■□□□□ 0.16
SFSWAP-203ENST00000535236 PPP1R1AQ13522 171 aa16.08■□□□□ 0.16
SFSWAP-203ENST00000535236 ZIC1Q15915 447 aa16.08■□□□□ 0.16
SFSWAP-203ENST00000535236 PRSS3P2Q8NHM4 247 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms