RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 KCTD18Q6PI47 426 aaPredicted RBP11.89□□□□□ -0.51
CTSB-230ENST00000534149 TRMT10AQ8TBZ6 339 aaKnown RBP11.89□□□□□ -0.51
CTSB-230ENST00000534149 FEVQ99581 238 aa11.89□□□□□ -0.51
CTSB-230ENST00000534149 MROQ9BYG7 248 aa11.89□□□□□ -0.51
CTSB-230ENST00000534149 TMEM133Q9H2Q1 129 aa11.89□□□□□ -0.51
CTSB-230ENST00000534149 GTF2A1LQ9UNN4 478 aa11.89□□□□□ -0.51
CTSB-230ENST00000534149 U3KQK5 164 aa11.89□□□□□ -0.51
CTSB-230ENST00000534149 HUWE1Q7Z6Z7 4374 aaKnown RBP11.88□□□□□ -0.51
CTSB-230ENST00000534149 STAB2Q8WWQ8 2551 aa11.88□□□□□ -0.51
CTSB-230ENST00000534149 DLGAP1O14490 977 aa11.88□□□□□ -0.51
CTSB-230ENST00000534149 MMP23AO75900 390 aa11.88□□□□□ -0.51
CTSB-230ENST00000534149 INMTO95050 263 aa11.88□□□□□ -0.51
CTSB-230ENST00000534149 AMY1AP04745 511 aa11.88□□□□□ -0.51
CTSB-230ENST00000534149 AMY2AP04746 511 aa11.88□□□□□ -0.51
CTSB-230ENST00000534149 SLC2A5P22732 501 aa11.88□□□□□ -0.51
CTSB-230ENST00000534149 IL24Q13007 206 aa11.88□□□□□ -0.51
CTSB-230ENST00000534149 APOFQ13790 326 aa11.88□□□□□ -0.51
CTSB-230ENST00000534149 ZNF829Q3KNS6 432 aaPredicted RBP11.88□□□□□ -0.51
CTSB-230ENST00000534149 KIAA2026Q5HYC2 2103 aa11.88□□□□□ -0.51
CTSB-230ENST00000534149 C9orf152Q5JTZ5 239 aa11.88□□□□□ -0.51
CTSB-230ENST00000534149 DEGS2Q6QHC5 323 aa11.88□□□□□ -0.51
CTSB-230ENST00000534149 BAIAP2L2Q6UXY1 529 aa11.88□□□□□ -0.51
CTSB-230ENST00000534149 PIGWQ7Z7B1 504 aa11.88□□□□□ -0.51
CTSB-230ENST00000534149 DEFB107AQ8IZN7 70 aa11.88□□□□□ -0.51
CTSB-230ENST00000534149 OR51D1Q8NGF3 324 aa11.88□□□□□ -0.51
CTSB-230ENST00000534149 STMN2Q93045 179 aa11.88□□□□□ -0.51
CTSB-230ENST00000534149 SNX22Q96L94 193 aa11.88□□□□□ -0.51
CTSB-230ENST00000534149 PKIBQ9C010 78 aa11.88□□□□□ -0.51
CTSB-230ENST00000534149 YIPF3Q9GZM5 350 aa11.88□□□□□ -0.51
CTSB-230ENST00000534149 CHST6Q9GZX3 395 aa11.88□□□□□ -0.51
CTSB-230ENST00000534149 MAGIXQ9H6Y5 334 aa11.88□□□□□ -0.51
CTSB-230ENST00000534149 ACTR3BQ9P1U1 418 aa11.88□□□□□ -0.51
CTSB-230ENST00000534149 COPS3Q9UNS2 423 aa11.88□□□□□ -0.51
CTSB-230ENST00000534149 LINC00312Q9Y6C7 94 aa11.88□□□□□ -0.51
CTSB-230ENST00000534149 V9GYS6 101 aa11.88□□□□□ -0.51
CTSB-230ENST00000534149 OR2F2O95006 317 aa11.87□□□□□ -0.51
CTSB-230ENST00000534149 IGHA1P01876 353 aa11.87□□□□□ -0.51
CTSB-230ENST00000534149 BRS3P32247 399 aa11.87□□□□□ -0.51
CTSB-230ENST00000534149 THBS3P49746 956 aa11.87□□□□□ -0.51
CTSB-230ENST00000534149 RIDAP52758 137 aaKnown RBP11.87□□□□□ -0.51
CTSB-230ENST00000534149 CBX1P83916 185 aa11.87□□□□□ -0.51
CTSB-230ENST00000534149 ZBTB49Q6ZSB9 765 aa11.87□□□□□ -0.51
CTSB-230ENST00000534149 C18orf65Q6ZTR6 163 aa11.87□□□□□ -0.51
CTSB-230ENST00000534149 ZNF679Q8IYX0 411 aa11.87□□□□□ -0.51
CTSB-230ENST00000534149 OSR2Q8N2R0 312 aa11.87□□□□□ -0.51
CTSB-230ENST00000534149 OR14K1Q8NGZ2 314 aa11.87□□□□□ -0.51
CTSB-230ENST00000534149 GIPC3Q8TF64 312 aa11.87□□□□□ -0.51
CTSB-230ENST00000534149 SLAMF9Q96A28 289 aa11.87□□□□□ -0.51
CTSB-230ENST00000534149 CEP19Q96LK0 163 aa11.87□□□□□ -0.51
CTSB-230ENST00000534149 RBM14Q96PK6 669 aaKnown RBP11.87□□□□□ -0.51
CTSB-230ENST00000534149 MTCH1Q9NZJ7 389 aa11.87□□□□□ -0.51
CTSB-230ENST00000534149 DPM3Q9P2X0 92 aa11.87□□□□□ -0.51
CTSB-230ENST00000534149 IKZF2Q9UKS7 526 aa11.87□□□□□ -0.51
CTSB-230ENST00000534149 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.87□□□□□ -0.513e-6■■■■■ 26.9
CTSB-230ENST00000534149 FAM230AA0A1W2PPH8 454 aa11.86□□□□□ -0.51
CTSB-230ENST00000534149 PSMB11A5LHX3 300 aa11.86□□□□□ -0.51
CTSB-230ENST00000534149 FAM172BPA6NC97 362 aa11.86□□□□□ -0.51
CTSB-230ENST00000534149 LOC110117498-PIK3R3F6TDL0 507 aa11.86□□□□□ -0.51
CTSB-230ENST00000534149 ZNF254O75437 659 aa11.86□□□□□ -0.51
CTSB-230ENST00000534149 HMGN1P05114 100 aa11.86□□□□□ -0.51
CTSB-230ENST00000534149 NHLRC4P0CG21 123 aaPredicted RBP11.86□□□□□ -0.51
CTSB-230ENST00000534149 RPL23AP62750 156 aaKnown RBP11.86□□□□□ -0.51
CTSB-230ENST00000534149 ROM1Q03395 351 aa11.86□□□□□ -0.51
CTSB-230ENST00000534149 GRK1Q15835 563 aa11.86□□□□□ -0.51
CTSB-230ENST00000534149 PRAMEF5Q5TYX0 476 aa11.86□□□□□ -0.51
CTSB-230ENST00000534149 C16orf89Q6UX73 402 aa11.86□□□□□ -0.51
CTSB-230ENST00000534149 ZNF329Q86UD4 541 aa11.86□□□□□ -0.51
CTSB-230ENST00000534149 ABHD12Q8N2K0 398 aa11.86□□□□□ -0.51
CTSB-230ENST00000534149 OR52N4Q8NGI2 321 aa11.86□□□□□ -0.51
CTSB-230ENST00000534149 TFAP2CQ92754 450 aa11.86□□□□□ -0.51
CTSB-230ENST00000534149 MCRIP2Q9BUT9 160 aaKnown RBP11.86□□□□□ -0.51
CTSB-230ENST00000534149 CADM1Q9BY67 442 aaKnown RBP11.86□□□□□ -0.51
CTSB-230ENST00000534149 ARL8BQ9NVJ2 186 aa11.86□□□□□ -0.51
CTSB-230ENST00000534149 IL36RNQ9UBH0 155 aa11.86□□□□□ -0.51
CTSB-230ENST00000534149 DNAJB9Q9UBS3 223 aa11.86□□□□□ -0.51
CTSB-230ENST00000534149 DNAH7Q8WXX0 4024 aa11.86□□□□□ -0.51
CTSB-230ENST00000534149 EPPK1P58107 5090 aaKnown RBP11.86□□□□□ -0.51
CTSB-230ENST00000534149 A0A1B0GTI1 187 aa11.85□□□□□ -0.51
CTSB-230ENST00000534149 CCDC182A6NF36 153 aa11.85□□□□□ -0.51
CTSB-230ENST00000534149 H0YHG0 523 aa11.85□□□□□ -0.51
CTSB-230ENST00000534149 SRSF10O75494 262 aaKnown RBP11.85□□□□□ -0.51
CTSB-230ENST00000534149 HAND1O96004 215 aa11.85□□□□□ -0.51
CTSB-230ENST00000534149 GABRR1P24046 479 aa11.85□□□□□ -0.51
CTSB-230ENST00000534149 LMO1P25800 156 aa11.85□□□□□ -0.51
CTSB-230ENST00000534149 PEX2P28328 305 aa11.85□□□□□ -0.51
CTSB-230ENST00000534149 DGCR2P98153 550 aa11.85□□□□□ -0.51
CTSB-230ENST00000534149 CDK5Q00535 292 aa11.85□□□□□ -0.51
CTSB-230ENST00000534149 SNAPC1Q16533 368 aa11.85□□□□□ -0.51
CTSB-230ENST00000534149 SPATS1Q496A3 300 aa11.85□□□□□ -0.51
CTSB-230ENST00000534149 FAM98BQ52LJ0 330 aaKnown RBP11.85□□□□□ -0.51
CTSB-230ENST00000534149 BCL2L15Q5TBC7 163 aa11.85□□□□□ -0.51
CTSB-230ENST00000534149 UNQ9370/PRO34162Q6UXP9 181 aa11.85□□□□□ -0.51
CTSB-230ENST00000534149 PLEKHG7Q6ZR37 379 aa11.85□□□□□ -0.51
CTSB-230ENST00000534149 C8orf86Q6ZUL3 223 aa11.85□□□□□ -0.51
CTSB-230ENST00000534149 TRAPPC6BQ86SZ2 158 aa11.85□□□□□ -0.51
CTSB-230ENST00000534149 ASB17Q8WXJ9 295 aa11.85□□□□□ -0.51
CTSB-230ENST00000534149 FAM107BQ9H098 131 aa11.85□□□□□ -0.51
CTSB-230ENST00000534149 TAGLN3Q9UI15 199 aa11.85□□□□□ -0.51
CTSB-230ENST00000534149 IGKV1-27A0A075B6S5 117 aa11.84□□□□□ -0.51
CTSB-230ENST00000534149 ARRDC5A6NEK1 342 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms