RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 NME2P1O60361 137 aa16.9■□□□□ 0.3
CAPN1-226ENST00000533820 FHITP49789 147 aa16.9■□□□□ 0.3
CAPN1-226ENST00000533820 ASCL1P50553 236 aa16.9■□□□□ 0.3
CAPN1-226ENST00000533820 TMEM33P57088 247 aa16.9■□□□□ 0.3
CAPN1-226ENST00000533820 TAS2R46P59540 309 aa16.9■□□□□ 0.3
CAPN1-226ENST00000533820 C15orf54Q8N8G6 183 aa16.9■□□□□ 0.3
CAPN1-226ENST00000533820 OR2M3Q8NG83 312 aa16.9■□□□□ 0.3
CAPN1-226ENST00000533820 OR6X1Q8NH79 312 aa16.9■□□□□ 0.3
CAPN1-226ENST00000533820 FNDC9Q8TBE3 224 aa16.9■□□□□ 0.3
CAPN1-226ENST00000533820 PLEK2Q9NYT0 353 aa16.9■□□□□ 0.3
CAPN1-226ENST00000533820 CCDC85CA6NKD9 419 aa16.9■□□□□ 0.3
CAPN1-226ENST00000533820 IFITM10A6NMD0 228 aa16.9■□□□□ 0.3
CAPN1-226ENST00000533820 NUTF2P61970 127 aaKnown RBP16.9■□□□□ 0.3
CAPN1-226ENST00000533820 ZNF616Q08AN1 781 aa16.9■□□□□ 0.3
CAPN1-226ENST00000533820 CACNA1EQ15878 2313 aa16.9■□□□□ 0.3
CAPN1-226ENST00000533820 SNRNP70P08621 437 aaKnown RBP16.9■□□□□ 0.3
CAPN1-226ENST00000533820 PATE4P0C8F1 98 aa16.9■□□□□ 0.3
CAPN1-226ENST00000533820 RAB4BP61018 213 aa16.9■□□□□ 0.3
CAPN1-226ENST00000533820 SSPNQ14714 243 aa16.9■□□□□ 0.3
CAPN1-226ENST00000533820 PHLDA2Q53GA4 152 aa16.9■□□□□ 0.3
CAPN1-226ENST00000533820 CPEB2Q7Z5Q1 589 aaKnown RBP16.9■□□□□ 0.3
CAPN1-226ENST00000533820 PRR18Q8N4B5 295 aa16.9■□□□□ 0.3
CAPN1-226ENST00000533820 ERGIC1Q969X5 290 aa16.9■□□□□ 0.3
CAPN1-226ENST00000533820 NXT1Q9UKK6 140 aaKnown RBP16.9■□□□□ 0.3
CAPN1-226ENST00000533820 C1QL1O75973 258 aa16.89■□□□□ 0.29
CAPN1-226ENST00000533820 ZFAND5O76080 213 aa16.89■□□□□ 0.29
CAPN1-226ENST00000533820 PET100P0DJ07 73 aa16.89■□□□□ 0.29
CAPN1-226ENST00000533820 CSNK1A1P48729 337 aa16.89■□□□□ 0.29
CAPN1-226ENST00000533820 NDUFA6P56556 154 aa16.89■□□□□ 0.29
CAPN1-226ENST00000533820 LSM6P62312 80 aaKnown RBP16.89■□□□□ 0.29
CAPN1-226ENST00000533820 DHRS11Q6UWP2 260 aa16.89■□□□□ 0.29
CAPN1-226ENST00000533820 IL34Q6ZMJ4 242 aa16.89■□□□□ 0.29
CAPN1-226ENST00000533820 FAM24BQ8N5W8 94 aa16.89■□□□□ 0.29
CAPN1-226ENST00000533820 OR10J5Q8NHC4 309 aa16.89■□□□□ 0.29
CAPN1-226ENST00000533820 EMG1Q92979 244 aaKnown RBP16.89■□□□□ 0.29
CAPN1-226ENST00000533820 RASL10BQ96S79 203 aa16.89■□□□□ 0.29
CAPN1-226ENST00000533820 LIME1Q9H400 295 aa16.89■□□□□ 0.29
CAPN1-226ENST00000533820 EXPH5Q8NEV8 1989 aa16.89■□□□□ 0.29
CAPN1-226ENST00000533820 WDFY4Q6ZS81 3184 aa16.89■□□□□ 0.29
CAPN1-226ENST00000533820 ZNF850A8MQ14 1090 aa16.89■□□□□ 0.29
CAPN1-226ENST00000533820 TSTD3H0UI37 97 aa16.89■□□□□ 0.29
CAPN1-226ENST00000533820 ZNHIT1O43257 154 aa16.89■□□□□ 0.29
CAPN1-226ENST00000533820 ZNF25P17030 456 aaPredicted RBP16.89■□□□□ 0.29
CAPN1-226ENST00000533820 SNAI3Q3KNW1 292 aa16.89■□□□□ 0.29
CAPN1-226ENST00000533820 C10orf91Q5T1B1 145 aa16.89■□□□□ 0.29
CAPN1-226ENST00000533820 GGNBP1Q5YKI7 109 aa16.89■□□□□ 0.29
CAPN1-226ENST00000533820 OR5L2Q8NGL0 311 aa16.89■□□□□ 0.29
CAPN1-226ENST00000533820 CNTNAP3Q9BZ76 1288 aa16.89■□□□□ 0.29
CAPN1-226ENST00000533820 ZDHHC8Q9ULC8 765 aa16.89■□□□□ 0.29
CAPN1-226ENST00000533820 FRYQ5TBA9 3013 aa16.89■□□□□ 0.29
CAPN1-226ENST00000533820 ACKR3P25106 362 aa16.88■□□□□ 0.29
CAPN1-226ENST00000533820 MTCP1P56278 107 aa16.88■□□□□ 0.29
CAPN1-226ENST00000533820 GUSBP11Q6P575 273 aa16.88■□□□□ 0.29
CAPN1-226ENST00000533820 PPP1R3BQ86XI6 285 aa16.88■□□□□ 0.29
CAPN1-226ENST00000533820 SGPP2Q8IWX5 399 aa16.88■□□□□ 0.29
CAPN1-226ENST00000533820 SHDQ96IW2 340 aa16.88■□□□□ 0.29
CAPN1-226ENST00000533820 NUDT16L1Q9BRJ7 211 aaKnown RBP16.88■□□□□ 0.29
CAPN1-226ENST00000533820 ANAPC10Q9UM13 185 aa16.88■□□□□ 0.29
CAPN1-226ENST00000533820 MEMO1Q9Y316 297 aa16.88■□□□□ 0.29
CAPN1-226ENST00000533820 B3GALT1Q9Y5Z6 326 aa16.88■□□□□ 0.29
CAPN1-226ENST00000533820 COL5A1P20908 1838 aaPredicted RBP16.88■□□□□ 0.29
CAPN1-226ENST00000533820 HIST1H1BP16401 226 aaKnown RBP16.88■□□□□ 0.29
CAPN1-226ENST00000533820 RAET1LQ5VY80 246 aa16.88■□□□□ 0.29
CAPN1-226ENST00000533820 SLC39A7Q92504 469 aa16.88■□□□□ 0.29
CAPN1-226ENST00000533820 SMIM8Q96KF7 97 aa16.88■□□□□ 0.29
CAPN1-226ENST00000533820 AMDHD2Q9Y303 409 aa16.88■□□□□ 0.29
CAPN1-226ENST00000533820 TLX3O43711 291 aaPredicted RBP16.88■□□□□ 0.29
CAPN1-226ENST00000533820 MT-ND4LP03901 98 aa16.88■□□□□ 0.29
CAPN1-226ENST00000533820 NOVA1P51513 510 aaKnown RBP16.88■□□□□ 0.29
CAPN1-226ENST00000533820 FAM89BQ8N5H3 189 aa16.88■□□□□ 0.29
CAPN1-226ENST00000533820 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.88■□□□□ 0.29
CAPN1-226ENST00000533820 C1orf123Q9NWV4 160 aa16.88■□□□□ 0.29
CAPN1-226ENST00000533820 CEACAM18A8MTB9 384 aa16.87■□□□□ 0.29
CAPN1-226ENST00000533820 OR5H8P0DN80 308 aa16.87■□□□□ 0.29
CAPN1-226ENST00000533820 GRB2P62993 217 aaKnown RBP16.87■□□□□ 0.29
CAPN1-226ENST00000533820 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.87■□□□□ 0.29
CAPN1-226ENST00000533820 METTL9Q9H1A3 318 aa16.87■□□□□ 0.29
CAPN1-226ENST00000533820 SIRT7Q9NRC8 400 aa16.87■□□□□ 0.29
CAPN1-226ENST00000533820 BCAT2O15382 392 aaPredicted RBP16.87■□□□□ 0.29
CAPN1-226ENST00000533820 ARG1P05089 322 aa16.87■□□□□ 0.29
CAPN1-226ENST00000533820 RAB5AP20339 215 aa16.87■□□□□ 0.29
CAPN1-226ENST00000533820 MSR1P21757 451 aa16.87■□□□□ 0.29
CAPN1-226ENST00000533820 PIGPP57054 158 aa16.87■□□□□ 0.29
CAPN1-226ENST00000533820 IL15RAQ13261 267 aa16.87■□□□□ 0.29
CAPN1-226ENST00000533820 RSPO1Q2MKA7 263 aaPredicted RBP16.87■□□□□ 0.29
CAPN1-226ENST00000533820 SPACA9Q96E40 222 aaPredicted RBP16.87■□□□□ 0.29
CAPN1-226ENST00000533820 KIRREL1Q96J84 757 aa16.87■□□□□ 0.29
CAPN1-226ENST00000533820 EGLN1Q9GZT9 426 aa16.87■□□□□ 0.29
CAPN1-226ENST00000533820 CRLF2Q9HC73 371 aa16.87■□□□□ 0.29
CAPN1-226ENST00000533820 GAR1Q9NY12 217 aaKnown RBP16.87■□□□□ 0.29
CAPN1-226ENST00000533820 PADI1Q9ULC6 663 aa16.87■□□□□ 0.29
CAPN1-226ENST00000533820 TP53TG5Q9Y2B4 290 aa16.87■□□□□ 0.29
CAPN1-226ENST00000533820 M0R135 149 aa16.86■□□□□ 0.29
CAPN1-226ENST00000533820 SLC33A1O00400 549 aaPredicted RBP16.86■□□□□ 0.29
CAPN1-226ENST00000533820 ZNF799Q96GE5 643 aa16.86■□□□□ 0.29
CAPN1-226ENST00000533820 FIGNL2A6NMB9 653 aa16.86■□□□□ 0.29
CAPN1-226ENST00000533820 MSTNO14793 375 aa16.86■□□□□ 0.29
CAPN1-226ENST00000533820 DHRS3O75911 302 aa16.86■□□□□ 0.29
CAPN1-226ENST00000533820 IFNA21P01568 189 aa16.86■□□□□ 0.29
CAPN1-226ENST00000533820 TNFRSF9Q07011 255 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms