RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 ZNF676Q8N7Q3 588 aa8.53□□□□□ -1.04
CAPN1-225ENST00000533704 CCDC54Q8NEL0 328 aa8.53□□□□□ -1.04
CAPN1-225ENST00000533704 C17orf50Q8WW18 174 aa8.53□□□□□ -1.04
CAPN1-225ENST00000533704 WFDC12Q8WWY7 111 aa8.53□□□□□ -1.04
CAPN1-225ENST00000533704 RFT1Q96AA3 541 aa8.53□□□□□ -1.04
CAPN1-225ENST00000533704 LGALS12Q96DT0 336 aa8.53□□□□□ -1.04
CAPN1-225ENST00000533704 ADAT3Q96EY9 351 aaPredicted RBP8.53□□□□□ -1.04
CAPN1-225ENST00000533704 C4orf36Q96KX1 117 aa8.53□□□□□ -1.04
CAPN1-225ENST00000533704 C9orf16Q9BUW7 83 aa8.53□□□□□ -1.04
CAPN1-225ENST00000533704 SLITRK2Q9H156 845 aa8.53□□□□□ -1.04
CAPN1-225ENST00000533704 HES4Q9HCC6 221 aa8.53□□□□□ -1.04
CAPN1-225ENST00000533704 S100A14Q9HCY8 104 aa8.53□□□□□ -1.04
CAPN1-225ENST00000533704 AMBNQ9NP70 447 aa8.53□□□□□ -1.04
CAPN1-225ENST00000533704 MTCH1Q9NZJ7 389 aa8.53□□□□□ -1.04
CAPN1-225ENST00000533704 RNF114Q9Y508 228 aa8.53□□□□□ -1.04
CAPN1-225ENST00000533704 MMP24Q9Y5R2 645 aa8.53□□□□□ -1.04
CAPN1-225ENST00000533704 hCG_1809904A0A1W2PP81 198 aa8.52□□□□□ -1.05
CAPN1-225ENST00000533704 A0A1W2PPE2 198 aa8.52□□□□□ -1.05
CAPN1-225ENST00000533704 A0A1W2PR64 198 aa8.52□□□□□ -1.05
CAPN1-225ENST00000533704 A0A1W2PRV1 198 aa8.52□□□□□ -1.05
CAPN1-225ENST00000533704 CHRM2P08172 466 aa8.52□□□□□ -1.05
CAPN1-225ENST00000533704 ATF1P18846 271 aa8.52□□□□□ -1.05
CAPN1-225ENST00000533704 BCL3P20749 454 aa8.52□□□□□ -1.05
CAPN1-225ENST00000533704 AZGP1P25311 298 aaKnown RBP8.52□□□□□ -1.05
CAPN1-225ENST00000533704 DUSP1P28562 367 aa8.52□□□□□ -1.05
CAPN1-225ENST00000533704 RBP2P50120 134 aa8.52□□□□□ -1.05
CAPN1-225ENST00000533704 MTCP1P56278 107 aa8.52□□□□□ -1.05
CAPN1-225ENST00000533704 LGALS4P56470 323 aa8.52□□□□□ -1.05
CAPN1-225ENST00000533704 NANOS3P60323 173 aaKnown RBP8.52□□□□□ -1.05
CAPN1-225ENST00000533704 ERVK11-1P61568 191 aa8.52□□□□□ -1.05
CAPN1-225ENST00000533704 ACSM1Q08AH1 577 aa8.52□□□□□ -1.05
CAPN1-225ENST00000533704 ZNF273Q14593 569 aa8.52□□□□□ -1.05
CAPN1-225ENST00000533704 LY6EQ16553 131 aa8.52□□□□□ -1.05
CAPN1-225ENST00000533704 PRR31Q5SQ13 230 aa8.52□□□□□ -1.05
CAPN1-225ENST00000533704 HCP5Q6MZN7 132 aa8.52□□□□□ -1.05
CAPN1-225ENST00000533704 GDPD3Q7L5L3 318 aa8.52□□□□□ -1.05
CAPN1-225ENST00000533704 KCTD20Q7Z5Y7 419 aa8.52□□□□□ -1.05
CAPN1-225ENST00000533704 PQLC1Q8N2U9 271 aa8.52□□□□□ -1.05
CAPN1-225ENST00000533704 OR13C3Q8NGS6 347 aa8.52□□□□□ -1.05
CAPN1-225ENST00000533704 OR10AC1Q8NH08 325 aa8.52□□□□□ -1.05
CAPN1-225ENST00000533704 PP6455Q8WZ26 134 aa8.52□□□□□ -1.05
CAPN1-225ENST00000533704 RNF166Q96A37 237 aaPredicted RBP8.52□□□□□ -1.05
CAPN1-225ENST00000533704 MRPL48Q96GC5 212 aaKnown RBP8.52□□□□□ -1.05
CAPN1-225ENST00000533704 SLC29A1Q99808 456 aa8.52□□□□□ -1.05
CAPN1-225ENST00000533704 ALG8Q9BVK2 526 aa8.52□□□□□ -1.05
CAPN1-225ENST00000533704 PPA2Q9H2U2 334 aa8.52□□□□□ -1.05
CAPN1-225ENST00000533704 ZNF696Q9H7X3 374 aa8.52□□□□□ -1.05
CAPN1-225ENST00000533704 HEXA-AS1Q9H8Q6 139 aa8.52□□□□□ -1.05
CAPN1-225ENST00000533704 NEK6Q9HC98 313 aa8.52□□□□□ -1.05
CAPN1-225ENST00000533704 FRRS1LQ9P0K9 344 aa8.52□□□□□ -1.05
CAPN1-225ENST00000533704 IL36RNQ9UBH0 155 aa8.52□□□□□ -1.05
CAPN1-225ENST00000533704 VPREB3Q9UKI3 123 aa8.52□□□□□ -1.05
CAPN1-225ENST00000533704 HHLA2Q9UM44 414 aa8.52□□□□□ -1.05
CAPN1-225ENST00000533704 TET2Q6N021 2002 aaPredicted RBP8.51□□□□□ -1.05
CAPN1-225ENST00000533704 H3BUX3 64 aa8.51□□□□□ -1.05
CAPN1-225ENST00000533704 J3QRE1 110 aa8.51□□□□□ -1.05
CAPN1-225ENST00000533704 K7N7A8 449 aa8.51□□□□□ -1.05
CAPN1-225ENST00000533704 HAND1O96004 215 aa8.51□□□□□ -1.05
CAPN1-225ENST00000533704 DBTP11182 482 aaKnown RBP8.51□□□□□ -1.05
CAPN1-225ENST00000533704 PRKACAP17612 351 aa8.51□□□□□ -1.05
CAPN1-225ENST00000533704 PRKACBP22694 351 aa8.51□□□□□ -1.05
CAPN1-225ENST00000533704 GABRR1P24046 479 aa8.51□□□□□ -1.05
CAPN1-225ENST00000533704 NPBWR2P48146 333 aa8.51□□□□□ -1.05
CAPN1-225ENST00000533704 BMXP51813 675 aa8.51□□□□□ -1.05
CAPN1-225ENST00000533704 RPL15P61313 204 aaKnown RBP8.51□□□□□ -1.05
CAPN1-225ENST00000533704 ACTA2P62736 377 aa8.51□□□□□ -1.05
CAPN1-225ENST00000533704 ACTG2P63267 376 aa8.51□□□□□ -1.05
CAPN1-225ENST00000533704 ALKBH1Q13686 389 aaKnown RBP8.51□□□□□ -1.05
CAPN1-225ENST00000533704 MIDNQ504T8 468 aa8.51□□□□□ -1.05
CAPN1-225ENST00000533704 PLA1AQ53H76 456 aa8.51□□□□□ -1.05
CAPN1-225ENST00000533704 SLC25A30Q5SVS4 291 aa8.51□□□□□ -1.05
CAPN1-225ENST00000533704 Q6ZSV7 163 aa8.51□□□□□ -1.05
CAPN1-225ENST00000533704 ENTHD1Q8IYW4 607 aa8.51□□□□□ -1.05
CAPN1-225ENST00000533704 OR5D18Q8NGL1 313 aa8.51□□□□□ -1.05
CAPN1-225ENST00000533704 OR13C9Q8NGT0 318 aa8.51□□□□□ -1.05
CAPN1-225ENST00000533704 OR5R1Q8NH85 324 aa8.51□□□□□ -1.05
CAPN1-225ENST00000533704 LINC01006Q8NI28 216 aa8.51□□□□□ -1.05
CAPN1-225ENST00000533704 C10orf35Q96D05 121 aa8.51□□□□□ -1.05
CAPN1-225ENST00000533704 PELI1Q96FA3 418 aa8.51□□□□□ -1.05
CAPN1-225ENST00000533704 Q96MT0 163 aa8.51□□□□□ -1.05
CAPN1-225ENST00000533704 OPALINQ96PE5 141 aa8.51□□□□□ -1.05
CAPN1-225ENST00000533704 SPACA5Q96QH8 159 aa8.51□□□□□ -1.05
CAPN1-225ENST00000533704 SSX3Q99909 188 aa8.51□□□□□ -1.05
CAPN1-225ENST00000533704 CHST6Q9GZX3 395 aa8.51□□□□□ -1.05
CAPN1-225ENST00000533704 FAM234AQ9H0X4 552 aa8.51□□□□□ -1.05
CAPN1-225ENST00000533704 RBFOX1Q9NWB1 397 aaKnown RBP8.51□□□□□ -1.05
CAPN1-225ENST00000533704 EXOGQ9Y2C4 368 aaKnown RBP8.51□□□□□ -1.05
CAPN1-225ENST00000533704 MYRFQ9Y2G1 1151 aa8.51□□□□□ -1.05
CAPN1-225ENST00000533704 IGKV1-9A0A0C4DH69 117 aa8.5□□□□□ -1.05
CAPN1-225ENST00000533704 LOC100130705A0A1B0GUX0 176 aa8.5□□□□□ -1.05
CAPN1-225ENST00000533704 TMEM82A0PJX8 343 aa8.5□□□□□ -1.05
CAPN1-225ENST00000533704 OR4C45A6NMZ5 311 aa8.5□□□□□ -1.05
CAPN1-225ENST00000533704 E9PQ18 207 aa8.5□□□□□ -1.05
CAPN1-225ENST00000533704 SIRPB1O00241 398 aa8.5□□□□□ -1.05
CAPN1-225ENST00000533704 MPZL2O60487 215 aa8.5□□□□□ -1.05
CAPN1-225ENST00000533704 ZNF737O75373 536 aa8.5□□□□□ -1.05
CAPN1-225ENST00000533704 FADS2O95864 444 aaKnown RBP8.5□□□□□ -1.05
CAPN1-225ENST00000533704 IGHA1P01876 353 aa8.5□□□□□ -1.05
CAPN1-225ENST00000533704 ISG15P05161 165 aa8.5□□□□□ -1.05
CAPN1-225ENST00000533704 GABRB1P18505 474 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms