RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 A0A0U1RQV5 110 aa6.12□□□□□ -1.43
NXF1-215ENST00000533440 TMEM82A0PJX8 343 aa6.12□□□□□ -1.43
NXF1-215ENST00000533440 LEUTXA8MZ59 168 aa6.12□□□□□ -1.43
NXF1-215ENST00000533440 IGLV3-1P01715 115 aa6.12□□□□□ -1.43
NXF1-215ENST00000533440 SEMG1P04279 462 aa6.12□□□□□ -1.43
NXF1-215ENST00000533440 FRMD6-AS1P0C7T7 363 aa6.12□□□□□ -1.43
NXF1-215ENST00000533440 GSTT1P30711 240 aa6.12□□□□□ -1.43
NXF1-215ENST00000533440 VEGFCP49767 419 aa6.12□□□□□ -1.43
NXF1-215ENST00000533440 PSMA6P60900 246 aaKnown RBP6.12□□□□□ -1.43
NXF1-215ENST00000533440 SLC35B1P78383 322 aa6.12□□□□□ -1.43
NXF1-215ENST00000533440 RIPPLY1Q0D2K3 151 aa6.12□□□□□ -1.43
NXF1-215ENST00000533440 DEFB136Q30KP8 78 aa6.12□□□□□ -1.43
NXF1-215ENST00000533440 LCN1P1Q5VSP4 162 aa6.12□□□□□ -1.43
NXF1-215ENST00000533440 PLCXD3Q63HM9 321 aa6.12□□□□□ -1.43
NXF1-215ENST00000533440 C8orf82Q6P1X6 216 aaPredicted RBP6.12□□□□□ -1.43
NXF1-215ENST00000533440 BAIAP2L2Q6UXY1 529 aa6.12□□□□□ -1.43
NXF1-215ENST00000533440 OVCH2Q7RTZ1 564 aa6.12□□□□□ -1.43
NXF1-215ENST00000533440 TRPM8Q7Z2W7 1104 aa6.12□□□□□ -1.43
NXF1-215ENST00000533440 RTN4RL2Q86UN3 420 aa6.12□□□□□ -1.43
NXF1-215ENST00000533440 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.12□□□□□ -1.43
NXF1-215ENST00000533440 BATF2Q8N1L9 274 aa6.12□□□□□ -1.43
NXF1-215ENST00000533440 ABHD12Q8N2K0 398 aa6.12□□□□□ -1.43
NXF1-215ENST00000533440 ZNF596Q8TC21 504 aa6.12□□□□□ -1.43
NXF1-215ENST00000533440 RCN3Q96D15 328 aa6.12□□□□□ -1.43
NXF1-215ENST00000533440 SNX22Q96L94 193 aa6.12□□□□□ -1.43
NXF1-215ENST00000533440 CDRT15Q96T59 188 aa6.12□□□□□ -1.43
NXF1-215ENST00000533440 TM2D3Q9BRN9 247 aa6.12□□□□□ -1.43
NXF1-215ENST00000533440 SAMD4AQ9UPU9 718 aaKnown RBP6.12□□□□□ -1.43
NXF1-215ENST00000533440 PQLC2LA1A4F0 135 aa6.11□□□□□ -1.43
NXF1-215ENST00000533440 ARRDC5A6NEK1 342 aa6.11□□□□□ -1.43
NXF1-215ENST00000533440 ACOD1A6NK06 481 aa6.11□□□□□ -1.43
NXF1-215ENST00000533440 SERPINE3A8MV23 424 aa6.11□□□□□ -1.43
NXF1-215ENST00000533440 OOSP1A8MZH6 123 aa6.11□□□□□ -1.43
NXF1-215ENST00000533440 LY6LH3BQJ8 138 aa6.11□□□□□ -1.43
NXF1-215ENST00000533440 BUB1B-PAK6H3BSN5 160 aa6.11□□□□□ -1.43
NXF1-215ENST00000533440 FGF16O43320 207 aa6.11□□□□□ -1.43
NXF1-215ENST00000533440 NRASP01111 189 aa6.11□□□□□ -1.43
NXF1-215ENST00000533440 IGHG2P01859 326 aa6.11□□□□□ -1.43
NXF1-215ENST00000533440 RPLP1P05386 114 aaKnown RBP6.11□□□□□ -1.43
NXF1-215ENST00000533440 LYNP07948 512 aa6.11□□□□□ -1.43
NXF1-215ENST00000533440 FAM106CPP0CH98 169 aa6.11□□□□□ -1.43
NXF1-215ENST00000533440 CD34P28906 385 aa6.11□□□□□ -1.43
NXF1-215ENST00000533440 CDX1P47902 265 aaPredicted RBP6.11□□□□□ -1.43
NXF1-215ENST00000533440 INSL3P51460 131 aa6.11□□□□□ -1.43
NXF1-215ENST00000533440 FHL3Q13643 280 aa6.11□□□□□ -1.43
NXF1-215ENST00000533440 ZNF260Q3ZCT1 412 aa6.11□□□□□ -1.43
NXF1-215ENST00000533440 ZNF684Q5T5D7 378 aa6.11□□□□□ -1.43
NXF1-215ENST00000533440 TPTE2P1Q5T6R2 138 aa6.11□□□□□ -1.43
NXF1-215ENST00000533440 TMEM42Q69YG0 159 aa6.11□□□□□ -1.43
NXF1-215ENST00000533440 GLYATQ6IB77 296 aa6.11□□□□□ -1.43
NXF1-215ENST00000533440 OR52W1Q6IF63 320 aa6.11□□□□□ -1.43
NXF1-215ENST00000533440 TEX38Q6PEX7 206 aa6.11□□□□□ -1.43
NXF1-215ENST00000533440 LCNL1Q6ZST4 164 aa6.11□□□□□ -1.43
NXF1-215ENST00000533440 RASSF6Q6ZTQ3 369 aa6.11□□□□□ -1.43
NXF1-215ENST00000533440 THNSL2Q86YJ6 484 aa6.11□□□□□ -1.43
NXF1-215ENST00000533440 STPG2Q8N412 459 aa6.11□□□□□ -1.43
NXF1-215ENST00000533440 TPRX1Q8N7U7 411 aa6.11□□□□□ -1.43
NXF1-215ENST00000533440 C5orf56Q8N8D9 126 aa6.11□□□□□ -1.43
NXF1-215ENST00000533440 RNF152Q8N8N0 203 aa6.11□□□□□ -1.43
NXF1-215ENST00000533440 OTOSQ8NHW6 89 aa6.11□□□□□ -1.43
NXF1-215ENST00000533440 RP9Q8TA86 221 aaKnown RBP6.11□□□□□ -1.43
NXF1-215ENST00000533440 CREB3L1Q96BA8 519 aa6.11□□□□□ -1.43
NXF1-215ENST00000533440 ISOC1Q96CN7 298 aa6.11□□□□□ -1.43
NXF1-215ENST00000533440 HOPXQ9BPY8 73 aaPredicted RBP6.11□□□□□ -1.43
NXF1-215ENST00000533440 BTBD10Q9BSF8 475 aa6.11□□□□□ -1.43
NXF1-215ENST00000533440 TSSK6Q9BXA6 273 aa6.11□□□□□ -1.43
NXF1-215ENST00000533440 SEBOXQ9HB31 216 aaPredicted RBP6.11□□□□□ -1.43
NXF1-215ENST00000533440 INTS9Q9NV88 658 aaKnown RBP6.11□□□□□ -1.43
NXF1-215ENST00000533440 DNAJB9Q9UBS3 223 aa6.11□□□□□ -1.43
NXF1-215ENST00000533440 LINC00527Q9UJ94 153 aa6.11□□□□□ -1.43
NXF1-215ENST00000533440 ENPP5Q9UJA9 477 aa6.11□□□□□ -1.43
NXF1-215ENST00000533440 BAIAP2Q9UQB8 552 aa6.11□□□□□ -1.43
NXF1-215ENST00000533440 PIGLQ9Y2B2 252 aa6.11□□□□□ -1.43
NXF1-215ENST00000533440 SIRT4Q9Y6E7 314 aaPredicted RBP6.11□□□□□ -1.43
NXF1-215ENST00000533440 F8VVB4 439 aa6.1□□□□□ -1.43
NXF1-215ENST00000533440 F8VWA3 439 aa6.1□□□□□ -1.43
NXF1-215ENST00000533440 PSMD9O00233 223 aa6.1□□□□□ -1.43
NXF1-215ENST00000533440 CCRL2O00421 344 aa6.1□□□□□ -1.43
NXF1-215ENST00000533440 JTBO76095 146 aa6.1□□□□□ -1.43
NXF1-215ENST00000533440 LY86O95711 162 aa6.1□□□□□ -1.43
NXF1-215ENST00000533440 IFNGP01579 166 aa6.1□□□□□ -1.43
NXF1-215ENST00000533440 HCKP08631 526 aa6.1□□□□□ -1.43
NXF1-215ENST00000533440 PEX2P28328 305 aa6.1□□□□□ -1.43
NXF1-215ENST00000533440 RRM2P31350 389 aa6.1□□□□□ -1.43
NXF1-215ENST00000533440 CEACAM3P40198 252 aa6.1□□□□□ -1.43
NXF1-215ENST00000533440 MNDAP41218 407 aa6.1□□□□□ -1.43
NXF1-215ENST00000533440 NUDT2P50583 147 aa6.1□□□□□ -1.43
NXF1-215ENST00000533440 HMGA2P52926 109 aa6.1□□□□□ -1.43
NXF1-215ENST00000533440 ESRRGP62508 458 aa6.1□□□□□ -1.43
NXF1-215ENST00000533440 IL24Q13007 206 aa6.1□□□□□ -1.43
NXF1-215ENST00000533440 EDDM3AQ14507 147 aa6.1□□□□□ -1.43
NXF1-215ENST00000533440 PNLIPRP3Q17RR3 467 aa6.1□□□□□ -1.43
NXF1-215ENST00000533440 HLA-DRB5Q30154 266 aa6.1□□□□□ -1.43
NXF1-215ENST00000533440 CCDC144NLQ6NUI1 221 aa6.1□□□□□ -1.43
NXF1-215ENST00000533440 HEPN1Q6WQI6 88 aa6.1□□□□□ -1.43
NXF1-215ENST00000533440 SLC35E3Q7Z769 313 aa6.1□□□□□ -1.43
NXF1-215ENST00000533440 DRAM1Q8N682 238 aa6.1□□□□□ -1.43
NXF1-215ENST00000533440 OR9Q2Q8NGE9 314 aa6.1□□□□□ -1.43
NXF1-215ENST00000533440 OR52N4Q8NGI2 321 aa6.1□□□□□ -1.43
NXF1-215ENST00000533440 THEM6Q8WUY1 208 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms