RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 C2orf50Q96LR7 162 aa13.26□□□□□ -0.29
CACNA1E-208ENST00000533229 GPR87Q9BY21 358 aa13.26□□□□□ -0.29
CACNA1E-208ENST00000533229 PRRG4Q9BZD6 226 aa13.26□□□□□ -0.29
CACNA1E-208ENST00000533229 FAM117AQ9C073 453 aa13.26□□□□□ -0.29
CACNA1E-208ENST00000533229 CALHM2Q9HA72 323 aa13.26□□□□□ -0.29
CACNA1E-208ENST00000533229 C12orf4Q9NQ89 552 aa13.26□□□□□ -0.29
CACNA1E-208ENST00000533229 CRIM1Q9NZV1 1036 aa13.26□□□□□ -0.29
CACNA1E-208ENST00000533229 EDARQ9UNE0 448 aa13.26□□□□□ -0.29
CACNA1E-208ENST00000533229 ASPMQ8IZT6 3477 aa13.26□□□□□ -0.29
CACNA1E-208ENST00000533229 ZNF816-ZNF321PA0A0X1KG74 233 aa13.25□□□□□ -0.29
CACNA1E-208ENST00000533229 HLA-HP01893 362 aa13.25□□□□□ -0.29
CACNA1E-208ENST00000533229 ZNF708P17019 499 aa13.25□□□□□ -0.29
CACNA1E-208ENST00000533229 CCNOP22674 350 aa13.25□□□□□ -0.29
CACNA1E-208ENST00000533229 TFAP2EQ6VUC0 442 aa13.25□□□□□ -0.29
CACNA1E-208ENST00000533229 STOML3Q8TAV4 291 aa13.25□□□□□ -0.29
CACNA1E-208ENST00000533229 CPNE2Q96FN4 548 aaPredicted RBP13.25□□□□□ -0.29
CACNA1E-208ENST00000533229 PRDM14Q9GZV8 571 aa13.25□□□□□ -0.29
CACNA1E-208ENST00000533229 BDP1A6H8Y1 2624 aa13.25□□□□□ -0.29
CACNA1E-208ENST00000533229 ZNF850A8MQ14 1090 aa13.25□□□□□ -0.29
CACNA1E-208ENST00000533229 LINC01387J3KSC0 135 aa13.25□□□□□ -0.29
CACNA1E-208ENST00000533229 XRCC2O43543 280 aa13.25□□□□□ -0.29
CACNA1E-208ENST00000533229 IFNA2P01563 188 aa13.25□□□□□ -0.29
CACNA1E-208ENST00000533229 CTRB1P17538 263 aa13.25□□□□□ -0.29
CACNA1E-208ENST00000533229 NPBWR2P48146 333 aa13.25□□□□□ -0.29
CACNA1E-208ENST00000533229 RBM39Q14498 530 aaKnown RBP13.25□□□□□ -0.29
CACNA1E-208ENST00000533229 NRN1LQ496H8 165 aa13.25□□□□□ -0.29
CACNA1E-208ENST00000533229 PLA2G2CQ5R387 149 aa13.25□□□□□ -0.29
CACNA1E-208ENST00000533229 CTRB2Q6GPI1 263 aa13.25□□□□□ -0.29
CACNA1E-208ENST00000533229 ATRAIDQ6UW56 229 aa13.25□□□□□ -0.29
CACNA1E-208ENST00000533229 DHRS11Q6UWP2 260 aa13.25□□□□□ -0.29
CACNA1E-208ENST00000533229 TMEM200AQ86VY9 491 aa13.25□□□□□ -0.29
CACNA1E-208ENST00000533229 TMEM251Q8N6I4 163 aa13.25□□□□□ -0.29
CACNA1E-208ENST00000533229 DNTTIP1Q9H147 329 aa13.25□□□□□ -0.29
CACNA1E-208ENST00000533229 TAS2R3Q9NYW6 316 aa13.25□□□□□ -0.29
CACNA1E-208ENST00000533229 SLC7A11Q9UPY5 501 aa13.25□□□□□ -0.29
CACNA1E-208ENST00000533229 C21orf140B9A014 251 aa13.24□□□□□ -0.29
CACNA1E-208ENST00000533229 M0R296 226 aa13.24□□□□□ -0.29
CACNA1E-208ENST00000533229 CTSDP07339 412 aaPredicted RBP13.24□□□□□ -0.29
CACNA1E-208ENST00000533229 DTYMKP23919 212 aa13.24□□□□□ -0.29
CACNA1E-208ENST00000533229 ZNF273Q14593 569 aa13.24□□□□□ -0.29
CACNA1E-208ENST00000533229 C3AR1Q16581 482 aa13.24□□□□□ -0.29
CACNA1E-208ENST00000533229 LINC00470Q9BZP3 86 aa13.24□□□□□ -0.29
CACNA1E-208ENST00000533229 FGF23Q9GZV9 251 aaPredicted RBP13.24□□□□□ -0.29
CACNA1E-208ENST00000533229 IL36GQ9NZH8 169 aa13.24□□□□□ -0.29
CACNA1E-208ENST00000533229 PCDHB10Q9UN67 800 aa13.24□□□□□ -0.29
CACNA1E-208ENST00000533229 CRYM-AS1A6NIL9 109 aa13.24□□□□□ -0.29
CACNA1E-208ENST00000533229 ATP6V1G2-DDX39BF2Z307 99 aa13.24□□□□□ -0.29
CACNA1E-208ENST00000533229 MT-CO3P00414 261 aa13.24□□□□□ -0.29
CACNA1E-208ENST00000533229 SPEM2Q0P670 501 aa13.24□□□□□ -0.29
CACNA1E-208ENST00000533229 TMEM164Q5U3C3 297 aa13.24□□□□□ -0.29
CACNA1E-208ENST00000533229 DHRS13Q6UX07 377 aa13.24□□□□□ -0.29
CACNA1E-208ENST00000533229 BAP18Q8IXM2 172 aa13.24□□□□□ -0.29
CACNA1E-208ENST00000533229 ZNF611Q8N823 705 aa13.24□□□□□ -0.29
CACNA1E-208ENST00000533229 SLC30A7Q8NEW0 376 aa13.24□□□□□ -0.29
CACNA1E-208ENST00000533229 OR1S2Q8NGQ3 325 aa13.24□□□□□ -0.29
CACNA1E-208ENST00000533229 TOMM40LQ969M1 308 aa13.24□□□□□ -0.29
CACNA1E-208ENST00000533229 BCO1Q9HAY6 547 aa13.24□□□□□ -0.29
CACNA1E-208ENST00000533229 NECAP2Q9NVZ3 263 aa13.24□□□□□ -0.29
CACNA1E-208ENST00000533229 B4GALT7Q9UBV7 327 aa13.24□□□□□ -0.29
CACNA1E-208ENST00000533229 ZNF629Q9UEG4 869 aaPredicted RBP13.24□□□□□ -0.29
CACNA1E-208ENST00000533229 RBMXP38159 391 aaKnown RBP13.23□□□□□ -0.29
CACNA1E-208ENST00000533229 S100A10P60903 97 aa13.23□□□□□ -0.29
CACNA1E-208ENST00000533229 SLC25A26Q70HW3 274 aa13.23□□□□□ -0.29
CACNA1E-208ENST00000533229 FOXRED2Q8IWF2 684 aa13.23□□□□□ -0.29
CACNA1E-208ENST00000533229 SGPP2Q8IWX5 399 aa13.23□□□□□ -0.29
CACNA1E-208ENST00000533229 OR56B2PQ8NGI1 322 aa13.23□□□□□ -0.29
CACNA1E-208ENST00000533229 AQP10Q96PS8 301 aa13.23□□□□□ -0.29
CACNA1E-208ENST00000533229 HS3ST6Q96QI5 342 aa13.23□□□□□ -0.29
CACNA1E-208ENST00000533229 C1orf123Q9NWV4 160 aa13.23□□□□□ -0.29
CACNA1E-208ENST00000533229 C5orf49A4QMS7 147 aa13.22□□□□□ -0.29
CACNA1E-208ENST00000533229 RPL36A-HNRNPH2H7BZ11 118 aa13.22□□□□□ -0.29
CACNA1E-208ENST00000533229 FGF16O43320 207 aa13.22□□□□□ -0.29
CACNA1E-208ENST00000533229 TPT1P13693 172 aaKnown RBP13.22□□□□□ -0.29
CACNA1E-208ENST00000533229 ECI1P42126 302 aa13.22□□□□□ -0.29
CACNA1E-208ENST00000533229 RBM11P57052 281 aaKnown RBP13.22□□□□□ -0.29
CACNA1E-208ENST00000533229 PIGPP57054 158 aa13.22□□□□□ -0.29
CACNA1E-208ENST00000533229 IAH1Q2TAA2 248 aaPredicted RBP13.22□□□□□ -0.29
CACNA1E-208ENST00000533229 SP6Q3SY56 376 aa13.22□□□□□ -0.29
CACNA1E-208ENST00000533229 SLC22A25Q6T423 547 aa13.22□□□□□ -0.29
CACNA1E-208ENST00000533229 TMED6Q8WW62 240 aa13.22□□□□□ -0.29
CACNA1E-208ENST00000533229 REPIN1Q9BWE0 567 aaKnown RBP13.22□□□□□ -0.29
CACNA1E-208ENST00000533229 NGFP01138 241 aa13.22□□□□□ -0.29
CACNA1E-208ENST00000533229 ARHGDIBP52566 201 aa13.22□□□□□ -0.29
CACNA1E-208ENST00000533229 FXYD4P59646 89 aa13.22□□□□□ -0.29
CACNA1E-208ENST00000533229 NAAAQ02083 359 aa13.22□□□□□ -0.29
CACNA1E-208ENST00000533229 PLEKHN1Q494U1 663 aaPredicted RBP13.22□□□□□ -0.29
CACNA1E-208ENST00000533229 BPIFCQ8NFQ6 507 aa13.22□□□□□ -0.29
CACNA1E-208ENST00000533229 MRPL24Q96A35 216 aaKnown RBP13.22□□□□□ -0.29
CACNA1E-208ENST00000533229 SLC5A7Q9GZV3 580 aa13.22□□□□□ -0.29
CACNA1E-208ENST00000533229 PARPBPQ9NWS1 579 aa13.22□□□□□ -0.29
CACNA1E-208ENST00000533229 FRYQ5TBA9 3013 aa13.21□□□□□ -0.29
CACNA1E-208ENST00000533229 PDCD6O75340 191 aa13.21□□□□□ -0.29
CACNA1E-208ENST00000533229 APOC3P02656 99 aa13.21□□□□□ -0.29
CACNA1E-208ENST00000533229 GLI4P10075 376 aa13.21□□□□□ -0.29
CACNA1E-208ENST00000533229 FCGR2CP31995 323 aa13.21□□□□□ -0.29
CACNA1E-208ENST00000533229 GGNBP1Q5YKI7 109 aa13.21□□□□□ -0.29
CACNA1E-208ENST00000533229 ZNF585AQ6P3V2 769 aa13.21□□□□□ -0.29
CACNA1E-208ENST00000533229 C5orf24Q7Z6I8 188 aa13.21□□□□□ -0.29
CACNA1E-208ENST00000533229 HPSE2Q8WWQ2 592 aa13.21□□□□□ -0.29
CACNA1E-208ENST00000533229 PAPOLGQ9BWT3 736 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms