RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 CIB1Q99828 191 aa14.44□□□□□ -0.1
PCF11-206ENST00000533018 RIBC2Q9H4K1 309 aa14.44□□□□□ -0.1
PCF11-206ENST00000533018 RANBP3Q9H6Z4 567 aaPredicted RBP14.44□□□□□ -0.1
PCF11-206ENST00000533018 MTCH1Q9NZJ7 389 aa14.44□□□□□ -0.1
PCF11-206ENST00000533018 C17orf98A8MV24 154 aa14.43□□□□□ -0.1
PCF11-206ENST00000533018 F8VVB4 439 aa14.43□□□□□ -0.1
PCF11-206ENST00000533018 F8VWA3 439 aa14.43□□□□□ -0.1
PCF11-206ENST00000533018 CHST1O43916 411 aa14.43□□□□□ -0.1
PCF11-206ENST00000533018 ZNF728P0DKX0 622 aa14.43□□□□□ -0.1
PCF11-206ENST00000533018 CCL1P22362 96 aa14.43□□□□□ -0.1
PCF11-206ENST00000533018 POLR2IP36954 125 aaKnown RBP14.43□□□□□ -0.1
PCF11-206ENST00000533018 RASSF2P50749 326 aa14.43□□□□□ -0.1
PCF11-206ENST00000533018 EDDM3AQ14507 147 aa14.43□□□□□ -0.1
PCF11-206ENST00000533018 SSX2Q16385 188 aa14.43□□□□□ -0.1
PCF11-206ENST00000533018 CRIP3Q6Q6R5 217 aa14.43□□□□□ -0.1
PCF11-206ENST00000533018 Q6ZSR3 168 aa14.43□□□□□ -0.1
PCF11-206ENST00000533018 SLC25A26Q70HW3 274 aa14.43□□□□□ -0.1
PCF11-206ENST00000533018 PIFOQ8TCI5 191 aa14.43□□□□□ -0.1
PCF11-206ENST00000533018 GABARAPL1Q9H0R8 117 aa14.43□□□□□ -0.1
PCF11-206ENST00000533018 GNG8Q9UK08 70 aa14.43□□□□□ -0.1
PCF11-206ENST00000533018 DYNC1I1O14576 645 aa14.42□□□□□ -0.1
PCF11-206ENST00000533018 SULT1C4O75897 302 aa14.42□□□□□ -0.1
PCF11-206ENST00000533018 FCGR1AP12314 374 aa14.42□□□□□ -0.1
PCF11-206ENST00000533018 BNIP1Q12981 228 aa14.42□□□□□ -0.1
PCF11-206ENST00000533018 ARSJQ5FYB0 599 aaPredicted RBP14.42□□□□□ -0.1
PCF11-206ENST00000533018 FAM220AQ7Z4H9 259 aa14.42□□□□□ -0.1
PCF11-206ENST00000533018 DYNAPQ8N1N2 210 aa14.42□□□□□ -0.1
PCF11-206ENST00000533018 EMG1Q92979 244 aaKnown RBP14.42□□□□□ -0.1
PCF11-206ENST00000533018 FOXRED1Q96CU9 486 aaPredicted RBP14.42□□□□□ -0.1
PCF11-206ENST00000533018 TBL2Q9Y4P3 447 aaKnown RBP14.42□□□□□ -0.1
PCF11-206ENST00000533018 IGKV1-27A0A075B6S5 117 aa14.41□□□□□ -0.1
PCF11-206ENST00000533018 A0A0G2JK05 382 aa14.41□□□□□ -0.1
PCF11-206ENST00000533018 PEX14O75381 377 aa14.41□□□□□ -0.1
PCF11-206ENST00000533018 CYB5AP00167 134 aa14.41□□□□□ -0.1
PCF11-206ENST00000533018 IGHV1-8P0DP01 117 aa14.41□□□□□ -0.1
PCF11-206ENST00000533018 GABRR1P24046 479 aa14.41□□□□□ -0.1
PCF11-206ENST00000533018 DLX6P56179 175 aa14.41□□□□□ -0.1
PCF11-206ENST00000533018 OR12D2P58182 307 aa14.41□□□□□ -0.1
PCF11-206ENST00000533018 CNN3Q15417 329 aaKnown RBP14.41□□□□□ -0.1
PCF11-206ENST00000533018 TP53I3Q53FA7 332 aa14.41□□□□□ -0.1
PCF11-206ENST00000533018 TMEM219Q86XT9 240 aa14.41□□□□□ -0.1
PCF11-206ENST00000533018 RDH10Q8IZV5 341 aa14.41□□□□□ -0.1
PCF11-206ENST00000533018 OR8H2Q8N162 312 aa14.41□□□□□ -0.1
PCF11-206ENST00000533018 CCDC54Q8NEL0 328 aa14.41□□□□□ -0.1
PCF11-206ENST00000533018 OR8J1Q8NGP2 316 aa14.41□□□□□ -0.1
PCF11-206ENST00000533018 RPS4Y2Q8TD47 263 aa14.41□□□□□ -0.1
PCF11-206ENST00000533018 RFKQ969G6 155 aa14.41□□□□□ -0.1
PCF11-206ENST00000533018 MALSU1Q96EH3 234 aa14.41□□□□□ -0.1
PCF11-206ENST00000533018 SNX22Q96L94 193 aa14.41□□□□□ -0.1
PCF11-206ENST00000533018 ZNF714Q96N38 554 aa14.41□□□□□ -0.1
PCF11-206ENST00000533018 CHST5Q9GZS9 411 aa14.41□□□□□ -0.1
PCF11-206ENST00000533018 CHST6Q9GZX3 395 aa14.41□□□□□ -0.1
PCF11-206ENST00000533018 PLXNB1O43157 2135 aa14.41□□□□□ -0.1
PCF11-206ENST00000533018 LOC107986453A0A1B0GWG9 222 aa14.4□□□□□ -0.1
PCF11-206ENST00000533018 hADV38S2A0JD32 116 aa14.4□□□□□ -0.1
PCF11-206ENST00000533018 FAM90A8PA6NJQ4 464 aa14.4□□□□□ -0.1
PCF11-206ENST00000533018 ZNF737O75373 536 aa14.4□□□□□ -0.1
PCF11-206ENST00000533018 HAND1O96004 215 aa14.4□□□□□ -0.1
PCF11-206ENST00000533018 OCM2P0CE71 109 aa14.4□□□□□ -0.1
PCF11-206ENST00000533018 OCMP0CE72 109 aaPredicted RBP14.4□□□□□ -0.1
PCF11-206ENST00000533018 CALCBP10092 127 aa14.4□□□□□ -0.1
PCF11-206ENST00000533018 PEX2P28328 305 aa14.4□□□□□ -0.1
PCF11-206ENST00000533018 POU3F4P49335 361 aa14.4□□□□□ -0.1
PCF11-206ENST00000533018 ATP1B3P54709 279 aa14.4□□□□□ -0.1
PCF11-206ENST00000533018 SNU13P55769 128 aaKnown RBP14.4□□□□□ -0.1
PCF11-206ENST00000533018 HABP2Q14520 560 aaPredicted RBP14.4□□□□□ -0.1
PCF11-206ENST00000533018 GRK1Q15835 563 aa14.4□□□□□ -0.1
PCF11-206ENST00000533018 NSUN5P1Q3KNT7 163 aa14.4□□□□□ -0.1
PCF11-206ENST00000533018 LYG1Q8N1E2 194 aa14.4□□□□□ -0.1
PCF11-206ENST00000533018 PRSS35Q8N3Z0 413 aa14.4□□□□□ -0.1
PCF11-206ENST00000533018 TPRX1Q8N7U7 411 aa14.4□□□□□ -0.1
PCF11-206ENST00000533018 CFHR4Q92496 578 aa14.4□□□□□ -0.1
PCF11-206ENST00000533018 PITPNC1Q9UKF7 332 aa14.4□□□□□ -0.1
PCF11-206ENST00000533018 OAZ3Q9UMX2 235 aa14.4□□□□□ -0.1
PCF11-206ENST00000533018 TCF19Q9Y242 345 aa14.4□□□□□ -0.1
PCF11-206ENST00000533018 HILPDAQ9Y5L2 63 aa14.4□□□□□ -0.1
PCF11-206ENST00000533018 KIAA2026Q5HYC2 2103 aa14.39□□□□□ -0.11
PCF11-206ENST00000533018 TMEM82A0PJX8 343 aa14.39□□□□□ -0.11
PCF11-206ENST00000533018 SAC3D1A6NKF1 404 aa14.39□□□□□ -0.11
PCF11-206ENST00000533018 VGLL3A8MV65 326 aa14.39□□□□□ -0.11
PCF11-206ENST00000533018 G3V4G9 280 aa14.39□□□□□ -0.11
PCF11-206ENST00000533018 RBP4P02753 201 aa14.39□□□□□ -0.11
PCF11-206ENST00000533018 OPN1MWP04001 364 aa14.39□□□□□ -0.11
PCF11-206ENST00000533018 UBCP0CG48 685 aaKnown RBP14.39□□□□□ -0.11
PCF11-206ENST00000533018 OPN1MW2P0DN77 364 aa14.39□□□□□ -0.11
PCF11-206ENST00000533018 OPN1MW3P0DN78 364 aa14.39□□□□□ -0.11
PCF11-206ENST00000533018 ZNF20P17024 532 aa14.39□□□□□ -0.11
PCF11-206ENST00000533018 DUSP1P28562 367 aa14.39□□□□□ -0.11
PCF11-206ENST00000533018 RBP2P50120 134 aa14.39□□□□□ -0.11
PCF11-206ENST00000533018 MTCP1P56278 107 aa14.39□□□□□ -0.11
PCF11-206ENST00000533018 CDC42P60953 191 aa14.39□□□□□ -0.11
PCF11-206ENST00000533018 ACTA2P62736 377 aa14.39□□□□□ -0.11
PCF11-206ENST00000533018 ACTG2P63267 376 aa14.39□□□□□ -0.11
PCF11-206ENST00000533018 ACTC1P68032 377 aa14.39□□□□□ -0.11
PCF11-206ENST00000533018 ACTA1P68133 377 aa14.39□□□□□ -0.11
PCF11-206ENST00000533018 MEF2CQ06413 473 aaPredicted RBP14.39□□□□□ -0.11
PCF11-206ENST00000533018 ZNF626Q68DY1 528 aa14.39□□□□□ -0.11
PCF11-206ENST00000533018 CCBE1Q6UXH8 406 aaPredicted RBP14.39□□□□□ -0.11
PCF11-206ENST00000533018 TRAPPC6BQ86SZ2 158 aa14.39□□□□□ -0.11
PCF11-206ENST00000533018 Q8IYB0 196 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms